FFCP PHASE1:Hg19::chr16:1820625..1820641,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:1820625..1820641,+ | |||
|id=chr16:1820625..1820641,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.50e-10;1!CL:0000082;9.08e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.43e-10,1;CL:0000082,8.45e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.51e-19;2!UBERON:0003918;6.22e-15;10!UBERON:0007687;6.22e-15;10!UBERON:0006215;6.16e-13;3!UBERON:0008425;6.72e-11;1!UBERON:0005754;2.50e-10;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.61e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.50e-10;1!DOID:4549;2.50e-10;1!DOID:5861;2.50e-10;1!DOID:6496;2.50e-10;1!DOID:6193;2.50e-10;1!DOID:5409;6.24e-10;4!DOID:1324;8.50e-10;15!DOID:0050615;3.39e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.30e-10,1;DOID:3371,2.50e-10,1;DOID:4549,2.50e-10,1;DOID:5861,2.50e-10,1;DOID:6496,2.50e-10,1;DOID:5409,7.16e-10,4;DOID:1324,7.75e-10,15;DOID:0050615,3.12e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0002616!2.00e-12!59;UBERON:0001049!4.50e-12!57;UBERON:0005068!4.50e-12!57;UBERON:0006241!4.50e-12!57;UBERON:0007135!4.50e-12!57;UBERON:0007023!8.12e-12!115;UBERON:0000073!1.01e-10!94;UBERON:0001016!1.01e-10!94;UBERON:0002346!3.75e-10!90;UBERON:0001017!4.28e-10!82;UBERON:0002780!5.48e-10!41;UBERON:0001890!5.48e-10!41;UBERON:0006240!5.48e-10!41;UBERON:0005743!6.85e-10!86;UBERON:0000955!6.88e-10!69;UBERON:0006238!6.88e-10!69;UBERON:0003080!1.31e-09!42;UBERON:0003075!1.41e-09!86;UBERON:0007284!1.41e-09!86;UBERON:0000924!3.24e-09!173;UBERON:0006601!3.24e-09!173;UBERON:0002619!5.52e-09!22;UBERON:0001893!6.27e-09!34;UBERON:0001869!8.46e-09!32;UBERON:0004121!1.07e-08!169;UBERON:0001950!1.33e-08!20;UBERON:0000956!1.33e-08!25;UBERON:0000203!1.33e-08!25;UBERON:0002791!2.47e-08!33;UBERON:0002020!3.53e-08!34;UBERON:0003528!3.53e-08!34;UBERON:0000153!5.74e-07!129;UBERON:0007811!5.74e-07!129;UBERON:0003056!7.81e-07!61;UBERON:0000033!9.32e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.13e-19;2!UBERON:0002369;3.46e-13;3!UBERON:0001235;3.46e-13;3!UBERON:0006858;3.46e-13;3!UBERON:0006947;6.16e-13;3!UBERON:0004054;6.16e-13;3!UBERON:0000998;2.50e-10;1!UBERON:0001301;2.50e-10;1!UBERON:0006868;2.50e-10;1!UBERON:0003296;2.62e-10;4!UBERON:0010133;2.62e-10;4!UBERON:0005904;6.24e-10;4!UBERON:0004802;9.08e-08;19!UBERON:0000115;9.08e-08;19!UBERON:0002037;6.67e-07;6!UBERON:0002048;9.98e-07;22!UBERON:0004807;9.98e-07;22!UBERON:0000117;9.98e-07;22!UBERON:0000171;9.98e-07;22!UBERON:0000170;9.98e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.13e-19,2;UBERON:0002369,4.56e-13,3;UBERON:0001235,4.56e-13,3;UBERON:0006858,4.56e-13,3;UBERON:0006947,1.00e-12,3;UBERON:0004054,1.00e-12,3;UBERON:0003296,2.62e-10,4;UBERON:0010133,2.62e-10,4;UBERON:0000998,2.74e-10,1;UBERON:0006868,2.74e-10,1;UBERON:0001301,4.75e-10,1;UBERON:0005904,8.96e-10,4;UBERON:0009569,1.01e-09,112;UBERON:0005177,4.22e-09,101;UBERON:0002113,1.24e-08,26;UBERON:0003918,1.24e-08,26;UBERON:0011143,1.24e-08,26;UBERON:0005095,1.24e-08,26;UBERON:0007687,1.24e-08,26;UBERON:0004802,8.45e-08,19;UBERON:0000115,8.45e-08,19;UBERON:0005172,1.61e-07,54;UBERON:0005173,1.61e-07,54;UBERON:0000489,3.26e-07,31;UBERON:0002037,6.48e-07,6;UBERON:0006215,6.48e-07,6;UBERON:0002048,9.39e-07,22;UBERON:0000117,9.39e-07,22;UBERON:0000171,9.39e-07,22;UBERON:0000170,9.39e-07,22;UBERON:0005597,9.39e-07,22;UBERON:0000118,9.39e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.458426764241994,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.330569830721956,0,0.893288987462089,0.4046311234222,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,1.21360521749513,0,0,0,0,0.921482106297696,0,1.26602474769461,0,0,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0.537063524026827,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.7812832832557,7.43409999967664,0,0.455173793141999,0,0.472775363535873,0,0,0.347249989866585,0,0,1.52581736317083,1.21637185924347,0.886642856860642,0.438770794307945,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,3.00646838828985,2.48851659353393,0,0,0.313932918407225,0,0.284609546029793,0.416024019039416,0,0,0,1.04836000945218,1.89184635718778,0,0,0,0,1.3238419003725,0,0,0,0.569797163602908,0,0.480952921509202,0.640358984218058,0.999048047910651,0,0.687219576995494,0,0,0,0.471388069233591,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0.321506296930038,0.137539436597234,1.24632101408756,0,0,0.607495566580247,0,0,0.0524545881349981,0,0,0,0,0,1.5256112259285,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0.387848869084652,0,0,1.40963004463334,0,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0.310482014706917,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,2.57329909649911,0.260994291965212,0,0,0,0,0,0.657852148736121,0.176689145945881,0.192914038270915,0.337884881306145,0,0,0,0.553033744606923,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0,0,0.318004350653419,0,1.60114149657094,0,0,0.256916900385838,0,0.319267718114302,0.615349092722265,0,0.138314504928436,0.484426936895553,0,0,0.235939446695481,0,0.462102664601353,0,0,0,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0.413373593002368,0.634158101939068,0,0,0,0.175871244359621,0,0.535701835878287,0,2.42786241694653,2.95960848756687,0,0,0,0.543757863814654,0.328863867814245,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,3.95220846251626,0,0,0,0.3414369541879,0,0.430227358820278,0,0.0852134047591577,1.27016115057279,0,0,0,0,0.098150233615243,0.731507549893617,0,0,0,0,0,0.795803100645473,1.42704108933082,0.22589216407792,0,1.20770274853339,0.0771741581079447,0,1.41095188908457,0,0.235676547101626,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0.543931921527318,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0.0636471582781649,0,0,0,0.26940821205835,0,0,0.0814032686109745,0.106727345877715,0,0,0,0.244482888365733,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p@chr16:1820625..1820641,+ | |||
}} |
Revision as of 01:48, 12 January 2014
Short description: | p@chr16:1820625..1820641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:1820625..1820641, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.43e-10 | 1 |
epithelial cell of lung | 8.45e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.13e-19 | 2 |
adrenal gland | 4.56e-13 | 3 |
adrenal cortex | 4.56e-13 | 3 |
adrenal/interrenal gland | 4.56e-13 | 3 |
male genital duct | 1.00e-12 | 3 |
internal male genitalia | 1.00e-12 | 3 |
gland of diencephalon | 2.62e-10 | 4 |
neuroendocrine gland | 2.62e-10 | 4 |
seminal vesicle | 2.74e-10 | 1 |
seminal fluid secreting gland | 2.74e-10 | 1 |
epididymis | 4.75e-10 | 1 |
duct of male reproductive system | 8.96e-10 | 4 |
subdivision of trunk | 1.01e-09 | 112 |
trunk region element | 4.22e-09 | 101 |
kidney | 1.24e-08 | 26 |
kidney mesenchyme | 1.24e-08 | 26 |
upper urinary tract | 1.24e-08 | 26 |
kidney rudiment | 1.24e-08 | 26 |
kidney field | 1.24e-08 | 26 |
respiratory tract epithelium | 8.45e-08 | 19 |
lung epithelium | 8.45e-08 | 19 |
abdomen element | 1.61e-07 | 54 |
abdominal segment element | 1.61e-07 | 54 |
cavitated compound organ | 3.26e-07 | 31 |
cerebellum | 6.48e-07 | 6 |
rhombic lip | 6.48e-07 | 6 |
lung | 9.39e-07 | 22 |
respiratory tube | 9.39e-07 | 22 |
respiration organ | 9.39e-07 | 22 |
pair of lungs | 9.39e-07 | 22 |
lung primordium | 9.39e-07 | 22 |
lung bud | 9.39e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.30e-10 | 1 |
chondrosarcoma | 2.50e-10 | 1 |
extraosseous chondrosarcoma | 2.50e-10 | 1 |
myxoid chondrosarcoma | 2.50e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 2.50e-10 | 1 |
lung small cell carcinoma | 7.16e-10 | 4 |
lung cancer | 7.75e-10 | 15 |
respiratory system cancer | 3.12e-09 | 16 |