FFCP PHASE1:Hg19::chr16:81737287..81737322,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:81737287..81737322,+ | |||
|id=chr16:81737287..81737322,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.84e-26!180;CL:0000680!5.93e-15!57;CL:0000056!5.93e-15!57;CL:0000355!5.93e-15!57;CL:0000192!1.92e-14!42;CL:0000514!1.92e-14!42;CL:0000187!7.66e-14!54;CL:0000183!7.95e-14!59;CL:0000359!7.98e-13!32;CL:0000057!8.83e-13!75;CL:0000222!1.03e-12!119;CL:0000048!2.23e-12!430;CL:0000393!1.06e-11!60;CL:0000211!1.06e-11!60;CL:0000723!1.50e-11!436;CL:0000034!1.67e-10!444;CL:0002371!7.92e-10!591;CL:0000144!8.67e-10!625;CL:0002334!8.58e-07!12;CL:0000548!9.66e-07!679;CL:0000004!9.66e-07!679;CL:0000255!9.66e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000134;4.34e-13;55!CL:0000048;2.81e-11;58!CL:0000723;1.80e-09;61!CL:0000359;8.56e-09;32!CL:0000192;1.55e-08;43!CL:0000034;7.23e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.26e-12,427;CL:0000723,7.34e-12,433;CL:0000034,3.33e-11,441;CL:0000192,8.84e-11,43;CL:0000514,8.84e-11,43;CL:0000359,4.20e-09,32;CL:0000680,2.48e-08,58;CL:0000056,2.48e-08,58;CL:0000355,2.48e-08,58;CL:0000187,3.56e-08,55;CL:0000057,7.06e-07,76;CL:0000393,7.66e-07,61;CL:0000211,7.66e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.55e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!3.21e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.52e-19;14!DOID:120;3.01e-08;27!DOID:193;1.90e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.19e-19,14;DOID:120,2.14e-08,27;DOID:193,1.40e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.59e-13!63;UBERON:0001015!1.59e-13!63;UBERON:0000383!1.59e-13!63;UBERON:0001134!5.46e-13!61;UBERON:0002036!5.46e-13!61;UBERON:0003082!5.46e-13!61;UBERON:0002049!6.41e-13!79;UBERON:0007798!6.41e-13!79;UBERON:0004290!2.60e-12!70;UBERON:0004872!4.99e-11!84;UBERON:0004535!2.41e-10!110;UBERON:0000914!2.84e-10!83;UBERON:0002329!2.84e-10!83;UBERON:0003077!2.84e-10!83;UBERON:0003059!2.84e-10!83;UBERON:0007282!2.84e-10!83;UBERON:0009618!2.84e-10!83;UBERON:0007285!2.84e-10!83;UBERON:0000486!9.22e-10!82;UBERON:0001009!1.35e-09!113;UBERON:0000055!1.80e-09!69;UBERON:0001981!6.25e-09!60;UBERON:0007500!6.25e-09!60;UBERON:0004537!6.25e-09!60;UBERON:0006965!6.25e-09!60;UBERON:0001637!7.67e-09!42;UBERON:0003509!7.67e-09!42;UBERON:0004572!7.67e-09!42;UBERON:0000490!4.60e-08!138;UBERON:0004573!5.43e-08!33;UBERON:0004571!5.43e-08!33;UBERON:0005256!2.72e-07!143;UBERON:0003914!6.54e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.36e-11;13!UBERON:0002118;8.40e-09;5!UBERON:0000991;1.40e-07;21!UBERON:0002119;2.47e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.53e-11,13;UBERON:0002118,4.52e-09,5;UBERON:0000991,1.09e-07,21;UBERON:0009196,1.09e-07,21;UBERON:0009117,1.09e-07,21;UBERON:0005564,1.09e-07,21;UBERON:0002119,1.99e-07,4;UBERON:0001134,1.99e-07,62;UBERON:0002036,1.99e-07,62;UBERON:0003082,1.99e-07,62;UBERON:0004176,3.22e-07,22;UBERON:0002385,5.07e-07,64;UBERON:0001015,5.07e-07,64;UBERON:0000383,5.07e-07,64 | |||
|phase1_expression=0.363356758541113,1.71280419112787,0.704772020479856,1.0007329835313,0.446961094427288,0.872338524100369,5.06599756336621,1.26343974685366,0.261185628199839,0.245733936501509,0,0.873765488520689,1.05506791291381,0.37129905888014,0,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0.50133791063589,4.63508860674636,8.74814541756209,25.7916481260397,0.283604451492204,1.33037638477538,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,1.00416183829401,0,0,0,0.367663080345869,0,0.446498641420399,0.44905874525234,0.675668882899933,0,0.949265659568129,0.183201743930407,0,0,0,4.47274756525787,0.25326102332916,1.19168262731897,0.573673241497627,0.354668382198357,0.560677600142307,0,0.98667019366864,0.311211035399766,0.942974704487816,0.326923806226917,1.51357427644931,0.576175924479999,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0.309977343527296,1.18800285728205,0,1.82032272387605,2.87447256726495,0,0,0,0,0.30648779579902,0.300476117813194,0.680593098960126,0,1.49490172172997,2.54318281391474,0.900273288253207,1.03052529238439,1.54584324027377,2.60563598864226,1.5189869901714,7.50264939741229,2.27190396819703,4.23429533754577,0.161646056818812,0.355009592516614,0.906768884048762,1.01736355386293,0,0,0,0,0,0,0,0,0,3.12899064659632,0.643240938192885,0,0.928735856063958,2.16563844500876,0,0,0.241011029883482,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,1.05667824812239,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,3.23179289394444,0,0,0.531876233169741,0,0.257207374262142,0,0,3.28849385413739,8.68194568626309,2.46972101034231,0,5.33087923113819,0,1.80863626235752,0.871533458600294,0.199945982364114,0,0,0,1.91699884393266,0,0,1.73737568001095,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0,0,0,0,0,0,1.20378439891088,2.27407504055985,0,0.664225598535437,0.737476674166813,0,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0,0,0.604780586659361,0.496215615637554,1.84154367945675,4.49056151092918,1.02511319404561,6.65219423786715,1.44768529029247,0,0.308419387605311,2.48586415438378,0.9033987161519,1.03850885836724,0.581051892299796,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0.784349769176855,0,0,0,0,0.431831832204279,1.54227252690289,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,3.21367859688319,0.096670718292122,0,0,0.137836572484531,0.859361958946189,0,0.255679882248303,0.979352392114111,0,0,0,0,7.90237433805386,3.46293581513704,3.485186350803,1.23213432070436,2.12922412126809,0.869932992075073,3.33583594387056,0.286249773483982,0.372158369359667,1.2655176988749,1.90630193923825,0,0,0.636406495851874,2.35484592059769,2.33834194858309,3.0199073270966,1.06031162111118,2.42618977887979,0,0.842516912477962,1.46290121726877,0.731140468893853,2.11300293513511,0.272999822815972,0.565621727814851,0,2.75682671773062,1.32687795048244,0.438450885253763,1.15755106853338,0,0.608731130888112,0.6196469961995,0.563391205064483,3.29846110069318,2.55447506634115,1.426684205925,0,2.32218398827431,0.987884678879706,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,0,0,0,0,0,0,0,0,0.852408440419239,1.19372242368845,1.48482340416319,0.307160702099232,0,0.422008249231538,0.222617410045812,0.16480387422676,0,0,0,0,1.43176155503017,0,7.46495010388338,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0.269272933229316,0,4.14701507651495,0.366390373607449,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,2.23581842213102,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.400794101257669,0,0,0,0,0,0,0,0.235694034616795,1.49494626680975,1.98745407993433,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,2.71499800876856,5.18532894720761,2.93928624098468,1.19730191562487,0,2.55582032678133,0,0,0,0.129282956361551,0.13223260174269,3.93499727133958,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,3.73137007217185,1.63599316893057,1.10961172300523,0,0.50313580350515,2.66943366478961,0.45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| |||
|short_description=p@chr16:81737287..81737322,+ | |||
}} |
Revision as of 12:27, 20 January 2014
Short description: | p@chr16:81737287..81737322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:81737287..81737322, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.26e-12 | 427 |
somatic stem cell | 7.34e-12 | 433 |
stem cell | 3.33e-11 | 441 |
smooth muscle cell | 8.84e-11 | 43 |
smooth muscle myoblast | 8.84e-11 | 43 |
vascular associated smooth muscle cell | 4.20e-09 | 32 |
muscle precursor cell | 2.48e-08 | 58 |
myoblast | 2.48e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.48e-08 | 58 |
muscle cell | 3.56e-08 | 55 |
fibroblast | 7.06e-07 | 76 |
electrically responsive cell | 7.66e-07 | 61 |
electrically active cell | 7.66e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.53e-11 | 13 |
right ovary | 4.52e-09 | 5 |
gonad | 1.09e-07 | 21 |
indifferent external genitalia | 1.09e-07 | 21 |
indifferent gonad | 1.09e-07 | 21 |
gonad primordium | 1.09e-07 | 21 |
left ovary | 1.99e-07 | 4 |
skeletal muscle tissue | 1.99e-07 | 62 |
striated muscle tissue | 1.99e-07 | 62 |
myotome | 1.99e-07 | 62 |
external genitalia | 3.22e-07 | 22 |
muscle tissue | 5.07e-07 | 64 |
musculature | 5.07e-07 | 64 |
musculature of body | 5.07e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.19e-19 | 14 |
female reproductive organ cancer | 2.14e-08 | 27 |
reproductive organ cancer | 1.40e-07 | 29 |