FFCP PHASE1:Hg19::chr17:1494137..1494149,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_at_chr17:1494137..1494149,- | |||
|id=chr17:1494137..1494149,- | |||
|ontology_enrichment_celltype=CL:0002057!2.06e-34!42;CL:0000860!3.49e-34!45;CL:0000766!1.41e-25!76;CL:0002009!1.02e-24!65;CL:0002194!1.05e-24!63;CL:0000576!1.05e-24!63;CL:0000040!1.05e-24!63;CL:0000559!1.05e-24!63;CL:0000557!1.76e-22!71;CL:0000839!7.32e-22!70;CL:0000763!9.26e-15!112;CL:0000049!9.26e-15!112;CL:0000738!1.82e-14!140;CL:0002087!8.34e-13!119;CL:0002031!1.10e-11!124;CL:0002032!4.81e-09!165;CL:0000837!4.81e-09!165;CL:0000037!6.04e-09!172;CL:0000566!6.04e-09!172;CL:0000988!7.04e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-71;33!CL:0002057;1.35e-71;33!CL:0000473;2.88e-55;39!CL:0000234;2.88e-55;39!CL:0000576;3.53e-32;48!CL:0000766;2.49e-21;69!CL:0000763;2.33e-14;100!CL:0002087;6.68e-09;104!CL:0000511;3.20e-07;1!CL:0002625;3.20e-07;1!CL:0000216;3.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.66e-60,42;CL:0002057,2.66e-60,42;CL:0000473,1.42e-57,48;CL:0000234,1.42e-57,48;CL:0002194,3.62e-45,59;CL:0000576,3.62e-45,59;CL:0000040,3.62e-45,59;CL:0000559,3.62e-45,59;CL:0000766,8.26e-44,72;CL:0002009,1.45e-43,61;CL:0000839,5.57e-40,66;CL:0000557,2.51e-39,67;CL:0000763,9.43e-28,108;CL:0000049,9.43e-28,108;CL:0002087,3.50e-21,115;CL:0000738,4.35e-21,136;CL:0002031,4.05e-20,120;CL:0002032,4.42e-17,161;CL:0000837,4.42e-17,161;CL:0000037,3.59e-16,168;CL:0000988,4.16e-15,177;CL:0000511,2.66e-07,1;CL:0002625,2.66e-07,1;CL:0000216,2.66e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-47;42!CL:0000049;7.40e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.59e-20!102;UBERON:0003061!3.59e-20!102;UBERON:0002193!1.85e-18!112;UBERON:0002371!3.65e-18!80;UBERON:0001474!7.90e-16!86;UBERON:0002405!2.17e-14!115;UBERON:0004765!3.33e-14!101;UBERON:0001434!3.33e-14!101;UBERON:0003081!3.10e-10!216;UBERON:0002204!4.44e-08!167;UBERON:0000926!6.78e-07!448;UBERON:0004120!6.78e-07!448;UBERON:0006603!6.78e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.20e-07;1!UBERON:0001343;3.20e-07;1!UBERON:0004910;3.20e-07;1!UBERON:0004813;3.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.33e-34,76;UBERON:0001474,2.09e-31,82;UBERON:0002390,5.19e-31,98;UBERON:0003061,5.19e-31,98;UBERON:0004765,3.02e-28,90;UBERON:0002193,1.01e-27,108;UBERON:0002405,3.35e-27,93;UBERON:0001434,5.30e-25,100;UBERON:0003081,2.61e-15,203;UBERON:0002204,1.15e-14,167;UBERON:0000926,7.21e-10,315;UBERON:0004120,7.21e-10,315;UBERON:0006603,7.21e-10,315;UBERON:0001136,2.66e-07,1;UBERON:0001343,2.66e-07,1;UBERON:0004910,2.66e-07,1;UBERON:0005154,2.66e-07,1;UBERON:0005295,2.66e-07,1;UBERON:0004813,2.66e-07,1;UBERON:0005297,2.66e-07,1;UBERON:0005294,2.66e-07,1;UBERON:0010141,2.66e-07,1;UBERON:0005891,2.66e-07,1 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0.401088894940283,0.868043482863407,0,0,0,4.07115068582781,1.13362783106643,0,2.32429036905685,2.46700732813095,1.85823822537062,3.74000110018796,1.5369642391746,1.18241114944293,1.72372840368309,0.645484683583826,2.70852973188684,5.64727018627814,2.18324920046277,2.02251136000576,5.81559395504715,0.962787081228281,4.47535988059329,1.9791078011203,1.59570926097305,2.13112375266347,2.03146467040009,0.56738522469114,0.622822248995575,2.00998932205395,0,0.65156653411535,4.23779651843358,0.368277635987565,0.632924774881769,0.633765858935825,0.637812899895131,0,0.336985893439485,0.600707571366025,0.48217676009124,0.570025487482497,0.59675003159727,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0,0.130979075497713,0.364295288292542,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0,0,0,0.24406205754817,0,3.24056779152704,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,8.97484377612075,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0,0.120859449591622,0.601519410909855,0.0920809889358963,0,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,1.27264888758341,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,1.70894156152249,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0.91227394607833,0,0,0,1.20990716048664,0,0.252746318513952,0.300646838828985,0,0,0,0,0,0,0,0.694238953340524,0,0,0.17472666824203,0,0,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0,0,0,0,0.275078873194468,0.415440338029185,0.2249738915515,0,0,0,0.394028536495991,0.314727528809989,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0.979762080328227,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0.337884881306145,0,0.345430341731199,0,0,0,0.132864840313363,0.163565394255844,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0.115233987555779,0,0.475788130837822,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0.118920090777569,0,0.109940516745429,0,0.154348316215889,1.5299169235277,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0.218531143927391,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.190941474834495,0,0.217716747896961,0.342233301085281,0,0,0.3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| |||
|short_description=p@chr17:1494137..1494149,- | |||
}} |
Revision as of 13:00, 20 January 2014
Short description: | p@chr17:1494137..1494149, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1494137..1494149, - |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.66e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.66e-60 | 42 |
defensive cell | 1.42e-57 | 48 |
phagocyte | 1.42e-57 | 48 |
monopoietic cell | 3.62e-45 | 59 |
monocyte | 3.62e-45 | 59 |
monoblast | 3.62e-45 | 59 |
promonocyte | 3.62e-45 | 59 |
myeloid leukocyte | 8.26e-44 | 72 |
macrophage dendritic cell progenitor | 1.45e-43 | 61 |
myeloid lineage restricted progenitor cell | 5.57e-40 | 66 |
granulocyte monocyte progenitor cell | 2.51e-39 | 67 |
myeloid cell | 9.43e-28 | 108 |
common myeloid progenitor | 9.43e-28 | 108 |
nongranular leukocyte | 3.50e-21 | 115 |
leukocyte | 4.35e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 4.05e-20 | 120 |
hematopoietic oligopotent progenitor cell | 4.42e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.42e-17 | 161 |
hematopoietic stem cell | 3.59e-16 | 168 |
hematopoietic cell | 4.16e-15 | 177 |
androgen binding protein secreting cell | 2.66e-07 | 1 |
seminiferous tubule epithelial cell | 2.66e-07 | 1 |
Sertoli cell | 2.66e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.33e-34 | 76 |
bone element | 2.09e-31 | 82 |
hematopoietic system | 5.19e-31 | 98 |
blood island | 5.19e-31 | 98 |
skeletal element | 3.02e-28 | 90 |
hemolymphoid system | 1.01e-27 | 108 |
immune system | 3.35e-27 | 93 |
skeletal system | 5.30e-25 | 100 |
lateral plate mesoderm | 2.61e-15 | 203 |
musculoskeletal system | 1.15e-14 | 167 |
mesoderm | 7.21e-10 | 315 |
mesoderm-derived structure | 7.21e-10 | 315 |
presumptive mesoderm | 7.21e-10 | 315 |
mesothelium | 2.66e-07 | 1 |
seminiferous tubule of testis | 2.66e-07 | 1 |
epithelium of male gonad | 2.66e-07 | 1 |
epithelial cord | 2.66e-07 | 1 |
sex cord | 2.66e-07 | 1 |
seminiferous tubule epithelium | 2.66e-07 | 1 |
testis sex cord | 2.66e-07 | 1 |
genital ridge | 2.66e-07 | 1 |
primitive sex cord of indifferent gonad | 2.66e-07 | 1 |
coelomic epithelium | 2.66e-07 | 1 |