FFCP PHASE1:Hg19::chr17:2076035..2076057,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:2076035..2076057,- | |||
|id=chr17:2076035..2076057,- | |||
|ontology_enrichment_celltype=CL:0000222!4.36e-19!119;CL:0000220!9.86e-14!246;CL:0002321!2.60e-13!248;CL:0000055!5.56e-13!180;CL:0000359!8.94e-12!32;CL:0000183!5.66e-10!59;CL:0000680!7.48e-10!57;CL:0000056!7.48e-10!57;CL:0000355!7.48e-10!57;CL:0002139!1.43e-09!24;CL:0000071!5.74e-09!18;CL:0002546!5.74e-09!18;CL:0000192!7.34e-09!42;CL:0000514!7.34e-09!42;CL:0000187!7.63e-09!54;CL:0000213!1.04e-08!57;CL:0000215!1.04e-08!57;CL:0002078!3.31e-08!44;CL:0000393!3.41e-07!60;CL:0000211!3.41e-07!60;CL:1000497!7.20e-07!18;CL:0002518!7.20e-07!18;CL:0000115!8.57e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.16e-12;32!CL:0002594;8.54e-12;4!CL:0002544;6.58e-11;6!CL:0002139;6.67e-11;24!CL:0000071;2.57e-10;18!CL:1000413;5.90e-10;9!CL:0000115;9.76e-09;36!CL:0000192;7.75e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.50e-15,121;CL:0000359,3.06e-13,32;CL:0002594,6.37e-12,4;CL:0002544,1.48e-11,6;CL:0002139,4.01e-11,24;CL:0000071,8.08e-11,18;CL:0002546,8.08e-11,18;CL:1000413,1.35e-10,9;CL:0000192,1.60e-10,43;CL:0000514,1.60e-10,43;CL:0002078,1.60e-09,45;CL:0000115,1.66e-09,36;CL:0000213,6.58e-09,58;CL:0000215,6.58e-09,58;CL:0002321,2.01e-08,250;CL:0000187,1.89e-07,55;CL:0000680,6.87e-07,58;CL:0000056,6.87e-07,58;CL:0000355,6.87e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;2.57e-10;18!CL:0000514;7.75e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.76e-19!312;UBERON:0000025!2.03e-18!194;UBERON:0001637!2.79e-18!42;UBERON:0003509!2.79e-18!42;UBERON:0004572!2.79e-18!42;UBERON:0000055!4.26e-18!69;UBERON:0000483!4.71e-18!309;UBERON:0001981!6.70e-18!60;UBERON:0007500!6.70e-18!60;UBERON:0004537!6.70e-18!60;UBERON:0006965!6.70e-18!60;UBERON:0004872!1.36e-17!84;UBERON:0002049!6.43e-17!79;UBERON:0007798!6.43e-17!79;UBERON:0000475!1.57e-16!365;UBERON:0003914!3.81e-16!118;UBERON:0004111!5.89e-15!241;UBERON:0001009!9.76e-13!113;UBERON:0004573!2.26e-12!33;UBERON:0004571!2.26e-12!33;UBERON:0004535!4.43e-12!110;UBERON:0000477!1.35e-11!286;UBERON:0004290!1.61e-09!70;UBERON:0002100!3.86e-09!216;UBERON:0001986!5.74e-09!18;UBERON:0004638!5.74e-09!18;UBERON:0004852!5.74e-09!18;UBERON:0001134!2.43e-08!61;UBERON:0002036!2.43e-08!61;UBERON:0003082!2.43e-08!61;UBERON:0000490!3.19e-08!138;UBERON:0000486!5.85e-08!82;UBERON:0002385!1.12e-07!63;UBERON:0001015!1.12e-07!63;UBERON:0000383!1.12e-07!63;UBERON:0000947!1.13e-07!21;UBERON:0010191!1.13e-07!21;UBERON:0000467!1.68e-07!625;UBERON:0000487!1.70e-07!22;UBERON:0000914!1.74e-07!83;UBERON:0002329!1.74e-07!83;UBERON:0003077!1.74e-07!83;UBERON:0003059!1.74e-07!83;UBERON:0007282!1.74e-07!83;UBERON:0009618!1.74e-07!83;UBERON:0007285!1.74e-07!83;UBERON:0003075!2.17e-07!86;UBERON:0007284!2.17e-07!86;UBERON:0000480!2.19e-07!626;UBERON:0005256!2.62e-07!143;UBERON:0000481!7.06e-07!347;UBERON:0000468!7.85e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.68e-15;42!UBERON:0003509;3.68e-15;42!UBERON:0004572;3.68e-15;42!UBERON:0003914;2.72e-12;74!UBERON:0001310;8.54e-12;4!UBERON:0004573;1.70e-11;33!UBERON:0004571;1.70e-11;33!UBERON:0007500;3.69e-11;56!UBERON:0001981;3.69e-11;56!UBERON:0004537;3.69e-11;56!UBERON:0000055;1.12e-10;65!UBERON:0004638;2.57e-10;18!UBERON:0001986;2.57e-10;18!UBERON:0004852;2.57e-10;18!UBERON:0000487;3.70e-10;22!UBERON:0003915;5.90e-10;9!UBERON:0004700;5.90e-10;9!UBERON:0001917;5.90e-10;9!UBERON:0006914;1.09e-08;25!UBERON:0002049;2.21e-08;75!UBERON:0007798;2.21e-08;75!UBERON:0000025;8.37e-08;93!UBERON:0000490;5.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.11e-20,42;UBERON:0003509,1.11e-20,42;UBERON:0004572,1.11e-20,42;UBERON:0007500,3.15e-18,59;UBERON:0001981,3.15e-18,59;UBERON:0004537,3.15e-18,59;UBERON:0006965,3.15e-18,59;UBERON:0000055,6.88e-18,68;UBERON:0004872,2.05e-16,83;UBERON:0002049,1.00e-14,78;UBERON:0007798,1.00e-14,78;UBERON:0003914,1.19e-13,117;UBERON:0004573,9.36e-13,33;UBERON:0004571,9.36e-13,33;UBERON:0001310,6.37e-12,4;UBERON:0004638,8.08e-11,18;UBERON:0001986,8.08e-11,18;UBERON:0004852,8.08e-11,18;UBERON:0000487,1.23e-10,22;UBERON:0000025,1.27e-10,192;UBERON:0003915,1.35e-10,9;UBERON:0004700,1.35e-10,9;UBERON:0001917,1.35e-10,9;UBERON:0004535,1.62e-10,109;UBERON:0001009,4.70e-10,112;UBERON:0006914,4.26e-09,25;UBERON:0004111,8.85e-08,240;UBERON:0007503,1.63e-07,78;UBERON:0000947,4.12e-07,21;UBERON:0010191,4.12e-07,21 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,1.26343974685366,0,2.7030733015166,0.697801167972428,0,0.527533956456907,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0.204000691244253,0.313454721478088,0.572471974262113,1.09499540058307,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.665188192387692,0.527008714158756,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,1.98762407366705,2.58070378531837,2.42998351125316,0,0.838998872419812,1.6507082516404,0.835979866147242,0.775250277507987,0,1.00416183829401,2.41697590265488,0,0.24406205754817,1.83831540172934,1.62028389576352,0.625098097988558,0.44905874525234,0.225222960966644,1.53316637465883,0.949265659568129,2.19842092716489,0,0,0,0,0.379891534993739,0,0.573673241497627,0,0,1.06748995729705,1.2333377420858,0,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.448346041655403,0.23486899728753,0.647491777472526,0.421352420106746,0,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0,0,0,0,0,0,0.680593098960126,0.538168907066586,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,0.744467425326359,0.506328996723799,0.389748020644795,1.26216887122057,0,0,0.355009592516614,0.806016785821122,0.339121184620975,0.193260853163297,0.272746120590835,0,0,0,0,0.414644220061482,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0.768251997860379,1.1240175325762,0,0,0.651616610620649,0,0,0.34779121492523,0,1.01056513432752,0,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.901029173531752,0,0.784917590417525,0.87192013766656,1.3200891447771,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0,0.791951872933429,1.80863626235752,1.74306691720059,0.899756920638513,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0.895304816199478,0.112085143993527,0,0,0,3.30323011489202,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0.473107245101804,0.234282829985426,0,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0.195801157462741,0,0,0,0,0.909382714338778,3.32870879020994,2.41912234663744,0.496215615637554,0.61384789315225,0.280660094433074,0.256278298511402,0.511707249066704,0.64341568457443,0,0.462629081407967,0.177561725313127,0.657017248110473,2.07701771673448,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.131124414959424,0,0.231046011313244,0.784349769176855,4.38417673959782,0.949964660035881,0,0.850468526382578,1.72732732881711,1.54227252690289,1.35473218771926,1.00337954770971,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0.103041011647722,0,0,0.574265537996172,1.30012049207304,0,0.48335359146061,0.462145851343933,0.15350367472613,0.413509717453592,0.107420244868274,0.290033387828457,0.255679882248303,0.534192213880424,0.495854746082934,0.384380134730212,0.765676274967505,0.2023155617111,0.464845549297286,0.62962469366128,0.6970372701606,1.54016790088044,1.59691809095107,2.60979897622522,3.52116016297448,0.715624433709956,0,0,0.190630193923825,0.511795582622668,0,0.95460974377781,2.35484592059769,0.179872457583315,0,0,0.808729926293264,0,1.26377536871694,0,0.974853958525138,0,0,0,1.13008116620243,1.10273068709225,1.99031692572366,1.31535265576129,0,0,3.85529716229138,3.0982349809975,1.40847801266121,0,0,3.21003946333125,2.48332744849418,0.211107635297664,0,0,0,0.48111056362756,0,1.08890984861323,0,3.01353760869861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0.445234820091624,0,0,0,0,0,4.80662807760128,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0.663475559587348,0.886642856860642,0.219385397153973,0,0,0,0.227884111694002,0,0,0.108647371922008,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.313265848516366,0.471807930864739,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.189559738885464,6.91487729306666,0,0,0.330991955875499,2.19753042885058,1.19472429772959,0,0.832048038078832,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,1.09633539717401,1.39100228192093,0.253243183823515,0,0.881747022766871,0,0,0,0,0,0.576219191952599,0,0,0.543616824294456,0.418411385249333,0.101998217636322,0.288950589901519,0,0,0,1.28929632425987,0,0.279282401272254,0.687481272035051,0,0.399358000997982,0.429226048136571,0.223171457441873,0.403100834920358,0.360299883542404,0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| |||
|short_description=p@chr17:2076035..2076057,- | |||
}} |
Revision as of 13:04, 20 January 2014
Short description: | p@chr17:2076035..2076057, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:2076035..2076057, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.50e-15 | 121 |
vascular associated smooth muscle cell | 3.06e-13 | 32 |
smooth muscle cell of the umbilical artery | 6.37e-12 | 4 |
aortic endothelial cell | 1.48e-11 | 6 |
endothelial cell of vascular tree | 4.01e-11 | 24 |
blood vessel endothelial cell | 8.08e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.08e-11 | 18 |
endothelial cell of artery | 1.35e-10 | 9 |
smooth muscle cell | 1.60e-10 | 43 |
smooth muscle myoblast | 1.60e-10 | 43 |
meso-epithelial cell | 1.60e-09 | 45 |
endothelial cell | 1.66e-09 | 36 |
lining cell | 6.58e-09 | 58 |
barrier cell | 6.58e-09 | 58 |
embryonic cell | 2.01e-08 | 250 |
muscle cell | 1.89e-07 | 55 |
muscle precursor cell | 6.87e-07 | 58 |
myoblast | 6.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.87e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
artery | 1.11e-20 | 42 |
arterial blood vessel | 1.11e-20 | 42 |
arterial system | 1.11e-20 | 42 |
epithelial tube open at both ends | 3.15e-18 | 59 |
blood vessel | 3.15e-18 | 59 |
blood vasculature | 3.15e-18 | 59 |
vascular cord | 3.15e-18 | 59 |
vessel | 6.88e-18 | 68 |
splanchnic layer of lateral plate mesoderm | 2.05e-16 | 83 |
vasculature | 1.00e-14 | 78 |
vascular system | 1.00e-14 | 78 |
epithelial tube | 1.19e-13 | 117 |
systemic artery | 9.36e-13 | 33 |
systemic arterial system | 9.36e-13 | 33 |
umbilical artery | 6.37e-12 | 4 |
blood vessel endothelium | 8.08e-11 | 18 |
endothelium | 8.08e-11 | 18 |
cardiovascular system endothelium | 8.08e-11 | 18 |
simple squamous epithelium | 1.23e-10 | 22 |
tube | 1.27e-10 | 192 |
endothelial tube | 1.35e-10 | 9 |
arterial system endothelium | 1.35e-10 | 9 |
endothelium of artery | 1.35e-10 | 9 |
cardiovascular system | 1.62e-10 | 109 |
circulatory system | 4.70e-10 | 112 |
squamous epithelium | 4.26e-09 | 25 |
anatomical conduit | 8.85e-08 | 240 |
epithelial vesicle | 1.63e-07 | 78 |
aorta | 4.12e-07 | 21 |
aortic system | 4.12e-07 | 21 |