FFCP PHASE1:Hg19::chr17:34344991..34345000,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6368 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10622 | |||
|TSSclassifier=strong | |||
|UniProt=P55773 | |||
|association_with_transcript=4bp_to_ENST00000293280,NM_005064,NM_145898,uc002hks.1,uc002hkt.1_5end | |||
|description=CAGE_peak_2_at_CCL23_5end | |||
|id=chr17:34344991..34345000,- | |||
|ontology_enrichment_celltype=CL:0000763!1.34e-16!112;CL:0000049!1.34e-16!112;CL:0000766!1.29e-15!76;CL:0000839!9.57e-15!70;CL:0002194!1.89e-14!63;CL:0000576!1.89e-14!63;CL:0000040!1.89e-14!63;CL:0000559!1.89e-14!63;CL:0000557!1.98e-14!71;CL:0002009!8.71e-14!65;CL:0002032!9.17e-10!165;CL:0000837!9.17e-10!165;CL:0000037!6.07e-09!172;CL:0000566!6.07e-09!172;CL:0000071!6.60e-09!18;CL:0002546!6.60e-09!18;CL:0000988!1.75e-08!182;CL:0000115!8.81e-08!35;CL:0002618!3.61e-07!3;CL:0002057!5.77e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.90e-10;5!CL:0002618;5.62e-09;3!CL:0000990;5.58e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.45e-18,108;CL:0000049,2.45e-18,108;CL:0000766,6.22e-16,72;CL:0000839,5.62e-13,66;CL:0000557,9.51e-13,67;CL:0002194,1.61e-12,59;CL:0000576,1.61e-12,59;CL:0000040,1.61e-12,59;CL:0000559,1.61e-12,59;CL:0002009,4.84e-12,61;CL:0002032,5.56e-11,161;CL:0000837,5.56e-11,161;CL:0000037,2.35e-10,168;CL:0000840,3.09e-10,5;CL:0001029,3.09e-10,5;CL:0000988,1.26e-09,177;CL:0002618,5.74e-09,3;CL:0000738,4.40e-07,136;CL:0000990,5.81e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.00e-07;1!UBERON:0010226;3.20e-07;1 | |||
|ontology_enrichment_disease=DOID:8692!8.03e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.56e-08;31!DOID:8552;3.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.22e-08,31;DOID:8552,3.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.09e-14!102;UBERON:0003061!6.09e-14!102;UBERON:0002193!7.05e-13!112;UBERON:0002405!1.70e-12!115;UBERON:0003081!1.72e-12!216;UBERON:0002371!5.99e-12!80;UBERON:0001474!1.34e-10!86;UBERON:0007023!2.71e-10!115;UBERON:0001986!6.60e-09!18;UBERON:0004638!6.60e-09!18;UBERON:0004852!6.60e-09!18;UBERON:0004765!5.69e-08!101;UBERON:0001434!5.69e-08!101;UBERON:0000487!6.74e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.00e-07;1!UBERON:0001153;1.00e-07;1!UBERON:0009854;1.00e-07;1!UBERON:0000029;3.20e-07;1!UBERON:0002084;3.20e-07;1!UBERON:0002171;3.20e-07;1!UBERON:0002082;3.20e-07;1!UBERON:0006518;3.20e-07;1!UBERON:0008949;3.20e-07;1!UBERON:0000101;3.20e-07;1!UBERON:0002167;3.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.85e-11,76;UBERON:0002405,5.18e-10,93;UBERON:0001474,5.53e-10,82;UBERON:0002193,1.40e-09,108;UBERON:0002390,2.55e-09,98;UBERON:0003061,2.55e-09,98;UBERON:0004765,6.94e-09,90;UBERON:0001434,9.28e-08,100;UBERON:0001154,9.71e-08,1;UBERON:0001153,9.71e-08,1;UBERON:0001045,9.71e-08,1;UBERON:0000029,2.07e-07,1;UBERON:0002084,3.40e-07,1;UBERON:0002082,3.40e-07,1;UBERON:0010226,3.40e-07,1;UBERON:0002171,3.62e-07,1;UBERON:0006518,3.62e-07,1;UBERON:0008949,3.62e-07,1;UBERON:0000101,3.62e-07,1;UBERON:0002167,3.62e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.671746422719773,0,0.77272670290256,0,0,0,0,0.822335776043652,0.619412741790207,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0.612167784741805,0,0.639337125799041,0,0,0,1.16083695451434,2.8369261234557,10.5879782329248,0,0.521482918420201,0,0.605399502633369,1.10483290796269,12.3420331101945,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,13.9555379271514,5.04976238167875,9.04114131528283,0,0,0,0.596287222100115,0,0,0.56530794192401,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.714397826272638,2.02076435363553,1.35133776579987,0,0,0.366403487860815,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16708818237254,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,4.68008530278475,5.7966153292604,0,0,0,0,0,0,1.97065295158377,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,1.01489521846434,0,0,0,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0.80719882876419,2.12923118845163,3.09154810280188,1.22896305723383,1.78940886313933,0.333698283423817,3.51698571723673,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.398495976502139,5.24939439509181,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,1.32969345520125,0,0,0,0,0.476809736941136,0,0,0,0,0.995261931078505,0.353830258013357,1.83309043480088,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,9.27548222385549,0,0,0,0,3.52398461473392,0,1.24271716604159,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0.490296643507811,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.12729431655633,0.202117188958219,0,0,0,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CCL23 | |||
}} |
Revision as of 14:48, 20 January 2014
Short description: | p2@CCL23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCL23_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000293280, NM_005064, NM_145898, uc002hks.1, uc002hkt.1_5end |
EntrezGene: | CCL23 |
HGNC: | 10622 |
UniProt: | P55773 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.45e-18 | 108 |
common myeloid progenitor | 2.45e-18 | 108 |
myeloid leukocyte | 6.22e-16 | 72 |
myeloid lineage restricted progenitor cell | 5.62e-13 | 66 |
granulocyte monocyte progenitor cell | 9.51e-13 | 67 |
monopoietic cell | 1.61e-12 | 59 |
monocyte | 1.61e-12 | 59 |
monoblast | 1.61e-12 | 59 |
promonocyte | 1.61e-12 | 59 |
macrophage dendritic cell progenitor | 4.84e-12 | 61 |
hematopoietic oligopotent progenitor cell | 5.56e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.56e-11 | 161 |
hematopoietic stem cell | 2.35e-10 | 168 |
immature conventional dendritic cell | 3.09e-10 | 5 |
common dendritic progenitor | 3.09e-10 | 5 |
hematopoietic cell | 1.26e-09 | 177 |
endothelial cell of umbilical vein | 5.74e-09 | 3 |
leukocyte | 4.40e-07 | 136 |
conventional dendritic cell | 5.81e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.85e-11 | 76 |
immune system | 5.18e-10 | 93 |
bone element | 5.53e-10 | 82 |
hemolymphoid system | 1.40e-09 | 108 |
hematopoietic system | 2.55e-09 | 98 |
blood island | 2.55e-09 | 98 |
skeletal element | 6.94e-09 | 90 |
skeletal system | 9.28e-08 | 100 |
vermiform appendix | 9.71e-08 | 1 |
caecum | 9.71e-08 | 1 |
midgut | 9.71e-08 | 1 |
lymph node | 2.07e-07 | 1 |
heart left ventricle | 3.40e-07 | 1 |
cardiac ventricle | 3.40e-07 | 1 |
future cardiac ventricle | 3.40e-07 | 1 |
lower lobe of right lung | 3.62e-07 | 1 |
right lung lobe | 3.62e-07 | 1 |
lower lobe of lung | 3.62e-07 | 1 |
lobe of lung | 3.62e-07 | 1 |
right lung | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.22e-08 | 31 |
chronic myeloid leukemia | 3.20e-07 | 1 |