FFCP PHASE1:Hg19::chr17:34430980..34430984,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=6351 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10630 | |||
|TSSclassifier=not | |||
|UniProt=P13236,Q7M4M2 | |||
|association_with_transcript=-235bp_to_ENST00000250151,ENST00000394495,NM_002984,uc002hkw.1,uc002hkx.1_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_3_at_CCL4_5end | |||
|id=chr17:34430980..34430984,+ | |||
|ontology_enrichment_celltype=CL:0002087!9.59e-33!119;CL:0000738!1.31e-29!140;CL:0002031!1.40e-25!124;CL:0000037!3.32e-20!172;CL:0000566!3.32e-20!172;CL:0002057!4.33e-20!42;CL:0002032!6.10e-19!165;CL:0000837!6.10e-19!165;CL:0000860!3.92e-18!45;CL:0000988!5.44e-18!182;CL:0000625!1.11e-17!11;CL:0002194!5.33e-15!63;CL:0000576!5.33e-15!63;CL:0000040!5.33e-15!63;CL:0000559!5.33e-15!63;CL:0000766!5.41e-15!76;CL:0000542!1.01e-14!53;CL:0000051!1.01e-14!53;CL:0002009!3.06e-14!65;CL:0000838!4.32e-14!52;CL:0000791!1.98e-13!18;CL:0000789!1.98e-13!18;CL:0002420!1.98e-13!18;CL:0002419!1.98e-13!18;CL:0000790!1.98e-13!18;CL:0000839!1.52e-12!70;CL:0000557!3.09e-12!71;CL:0000084!8.52e-10!25;CL:0000827!8.52e-10!25;CL:0000763!5.52e-07!112;CL:0000049!5.52e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000625;9.45e-34;11!CL:0000791;3.69e-27;18!CL:0000789;3.69e-27;18!CL:0002419;3.69e-27;18!CL:0000084;1.27e-18;25!CL:0002087;1.14e-14;104!CL:0000860;3.40e-13;33!CL:0002057;3.40e-13;33!CL:0000623;6.78e-11;3!CL:0000226;1.01e-09;3!CL:0000842;1.01e-09;3!CL:0000473;5.45e-09;39!CL:0000234;5.45e-09;39!CL:0000542;9.27e-09;53!CL:0000576;1.32e-08;48!CL:0000766;1.18e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.09e-34,11;CL:0002087,1.34e-31,115;CL:0000738,5.16e-30,136;CL:0000791,2.33e-27,18;CL:0000789,2.33e-27,18;CL:0002420,2.33e-27,18;CL:0002419,2.33e-27,18;CL:0000790,2.33e-27,18;CL:0002031,1.04e-24,120;CL:0000037,3.14e-22,168;CL:0000988,1.50e-20,177;CL:0002032,1.26e-19,161;CL:0000837,1.26e-19,161;CL:0000084,9.25e-19,25;CL:0000827,9.25e-19,25;CL:0000838,4.32e-17,52;CL:0000542,1.13e-16,53;CL:0000051,1.13e-16,53;CL:0000860,1.07e-15,42;CL:0002057,1.07e-15,42;CL:0000473,3.26e-13,48;CL:0000234,3.26e-13,48;CL:0000766,4.18e-12,72;CL:0002194,4.06e-11,59;CL:0000576,4.06e-11,59;CL:0000040,4.06e-11,59;CL:0000559,4.06e-11,59;CL:0000623,6.80e-11,3;CL:0000825,6.80e-11,3;CL:0002009,1.27e-10,61;CL:0000226,1.23e-09,3;CL:0000842,1.23e-09,3;CL:0000839,1.63e-09,66;CL:0000557,2.59e-09,67;CL:0000893,6.49e-07,2;CL:0002489,6.49e-07,2;CL:0000809,6.49e-07,2;CL:0000808,6.49e-07,2;CL:0000894,6.49e-07,2;CL:0000806,6.49e-07,2;CL:0000807,6.49e-07,2;CL:0000805,6.49e-07,2;CL:0002425,6.49e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.69e-27;18!CL:0002057;7.41e-11;42!CL:0000051;9.27e-09;53!CL:0002425;7.98e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-27!115;UBERON:0002390!2.37e-23!102;UBERON:0003061!2.37e-23!102;UBERON:0002193!5.89e-22!112;UBERON:0000178!2.15e-13!15;UBERON:0000179!2.15e-13!15;UBERON:0000463!2.15e-13!15;UBERON:0002405!2.69e-12!115;UBERON:0002371!7.72e-10!80;UBERON:0004177!1.22e-08!7;UBERON:0001474!1.51e-08!86;UBERON:0003081!5.95e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.80e-27;15!UBERON:0000179;7.80e-27;15!UBERON:0000463;7.80e-27;15!UBERON:0002390;1.82e-12;32!UBERON:0002193;2.00e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.36e-26,15;UBERON:0000179,1.36e-26,15;UBERON:0000463,1.36e-26,15;UBERON:0002390,8.98e-24,98;UBERON:0003061,8.98e-24,98;UBERON:0002193,2.91e-22,108;UBERON:0002405,2.76e-09,93;UBERON:0003081,9.51e-09,203;UBERON:0002371,9.50e-08,76;UBERON:0001474,6.64e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,1.47781061009902,1.57421562627358,0.786728553697808,3.83829398097213,2.47705797305722,0,0,0,0.0774672005803016,0,0,1.10799081706375,3.00816671205213,1.30206522429511,0.223915474239924,1.94336199611388,0.257575567634187,0.436194716338694,0,0,0.464858073811369,0.822335776043652,1.23882548358041,0.28769239232215,0.512321413058201,1.41889337933151,1.03423704220986,1.29096936716765,1.35426486594342,0.188242339542605,0,0,2.75475503133812,3.20929027076094,1.27867425159808,0.329851300186716,0.199463657621632,0,3.19230162491442,2.26954089876456,4.35975574296902,0.502497330513487,0,0,3.02699751316684,2.57794345191295,4.1140110367315,0,0.212604299965044,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0.779873198196215,0,0,0,0.512365278902701,0,0.657751618414705,0.276350017785848,0,0,0,0,2.49280553934646,1.91610246800961,4.12352934579156,4.04831507231205,2.54852331459277,5.85975108470777,4.75226022224187,2.71035214339991,5.11946444617674,9.99445812418767,6.39298580518846,9.03240796613151,4.63695509416885,6.95344509037119,4.77920532813237,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13838403181876,10.2455995305002,9.70324086867828,7.44389610422541,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,2.37285620900479,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,4.05958087385735,3.0585488285695,1.13929437434833,4.04994018278241,2.46817363851717,1.29694662238543,4.86028293514303,2.37937552888281,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0.552567831062295,0,0,0.984678443688556,0,0,0,0,1.1837208676432,11.974154617347,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.872901148395775,0,0,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.630445658393585,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0.13223260174269,0,0,1.9221734262185,0.471612915298998,1.24271716604159,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.177404740325278,0.691403925334676,0,0.0679697329768317,0.0657727735628491,0,0,0.549451649953598,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.655678681511872,0,0.245148321753905,0,0.785233868459781,1.18818560130834,0,0,3.38342104727473,0.515663103788617,0.0999411559249289,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,2.13233981900981,0,0.258355639344024,0.0620747142958579,0,0.636471582781649,0,0.435433495793923,0,1.0776328482334,0.286888821570705,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,1.40891655513718,0.641136984606466 | |||
|short_description=p3@CCL4 | |||
}} |
Revision as of 14:49, 20 January 2014
Short description: | p3@CCL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CCL4_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -235bp_to_ENST00000250151, ENST00000394495, NM_002984, uc002hkw.1, uc002hkx.1_5end |
EntrezGene: | CCL4 |
HGNC: | 10630 |
UniProt: | P13236Q7M4M2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.36e-26 | 15 |
haemolymphatic fluid | 1.36e-26 | 15 |
organism substance | 1.36e-26 | 15 |
hematopoietic system | 8.98e-24 | 98 |
blood island | 8.98e-24 | 98 |
hemolymphoid system | 2.91e-22 | 108 |
immune system | 2.76e-09 | 93 |
lateral plate mesoderm | 9.51e-09 | 203 |
bone marrow | 9.50e-08 | 76 |
bone element | 6.64e-07 | 82 |