FFCP PHASE1:Hg19::chr17:59475721..59475732,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1788 | |||
|description=CAGE_peak_at_chr17:59475721..59475732,+ | |||
|id=chr17:59475721..59475732,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.00e-50;2!UBERON:0005754;2.78e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.59e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.13e-11!115;UBERON:0006947!2.58e-08!3;UBERON:0004054!2.58e-08!3;UBERON:0000475!5.44e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.75e-74;3!UBERON:0004054;2.75e-74;3!UBERON:0005904;5.53e-56;4!UBERON:0000998;2.78e-26;1!UBERON:0006868;2.78e-26;1!UBERON:0001000;4.61e-26;1!UBERON:0005352;4.61e-26;1!UBERON:0001301;9.79e-26;1!UBERON:0000058;5.96e-23;10!UBERON:0003135;6.11e-21;11!UBERON:0004175;2.52e-11;21!UBERON:0003101;7.66e-11;22!UBERON:0000079;7.66e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.54e-74,3;UBERON:0004054,3.54e-74,3;UBERON:0005904,6.68e-56,4;UBERON:0000998,2.78e-26,1;UBERON:0006868,2.78e-26,1;UBERON:0001000,5.93e-26,1;UBERON:0005352,5.93e-26,1;UBERON:0001301,9.79e-26,1;UBERON:0003135,6.54e-21,11;UBERON:0000058,1.99e-12,19;UBERON:0000080,5.22e-12,9;UBERON:0002120,5.22e-12,9;UBERON:0004875,5.22e-12,9;UBERON:0005721,5.22e-12,9;UBERON:0005754,5.22e-12,9;UBERON:0007297,5.22e-12,9;UBERON:0003101,7.93e-11,22;UBERON:0000079,7.93e-11,22;UBERON:0004876,5.29e-10,11;UBERON:0004175,1.31e-09,25;UBERON:0003887,3.01e-09,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.600686115687835,0.285826432630578,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,3.15667522279512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,1.88645166119599,0,0,0,0,0,0,0,0,0.327872630709804,0.314108192500469,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0.323474434190045,0,1.09209638192014,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0.192687675289379,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.333694205676207,0.156986185701028,0,0.840816489941367,0,0,0,0.357382720883282,0,6.39327839524689,0,0,0,0,0,0,0,0,4.23387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0.475680363110274,3.50132854320776,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0.535928260312357,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr17:59475721..59475732,+ | |||
}} |
Revision as of 16:40, 20 January 2014
Short description: | p@chr17:59475721..59475732, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:59475721..59475732, + |
Coexpression cluster: | C1788_seminal_rhabdomyosarcoma_ductus_lung_epididymis_skeletal_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.54e-74 | 3 |
internal male genitalia | 3.54e-74 | 3 |
duct of male reproductive system | 6.68e-56 | 4 |
seminal vesicle | 2.78e-26 | 1 |
seminal fluid secreting gland | 2.78e-26 | 1 |
vas deferens | 5.93e-26 | 1 |
spermatic cord | 5.93e-26 | 1 |
epididymis | 9.79e-26 | 1 |
male reproductive organ | 6.54e-21 | 11 |
duct | 1.99e-12 | 19 |
mesonephros | 5.22e-12 | 9 |
pronephros | 5.22e-12 | 9 |
nephrogenic cord | 5.22e-12 | 9 |
pronephric mesoderm | 5.22e-12 | 9 |
rostral part of nephrogenic cord | 5.22e-12 | 9 |
presumptive pronephric mesoderm | 5.22e-12 | 9 |
male organism | 7.93e-11 | 22 |
male reproductive system | 7.93e-11 | 22 |
urogenital ridge | 5.29e-10 | 11 |
internal genitalia | 1.31e-09 | 25 |
intraembryonic coelom | 3.01e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.59e-07 | 4 |