FFCP PHASE1:Hg19::chr19:6361644..6361677,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8192 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2084 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=58bp_to_DQ895823,EU176368_5end | |||
|description=CAGE_peak_2_at_CLPP_5end | |||
|id=chr19:6361644..6361677,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.67e-25!248;CL:0000220!1.87e-24!246;CL:0000066!4.30e-23!254;CL:0000222!1.99e-16!119;CL:0000183!1.97e-11!59;CL:0000012!7.08e-11!682;CL:0000393!8.01e-11!60;CL:0000211!8.01e-11!60;CL:0000548!8.20e-11!679;CL:0000004!8.20e-11!679;CL:0000255!8.20e-11!679;CL:0000192!2.80e-10!42;CL:0000514!2.80e-10!42;CL:0000187!4.46e-10!54;CL:0000680!5.19e-10!57;CL:0000056!5.19e-10!57;CL:0000355!5.19e-10!57;CL:0000003!1.06e-09!722;CL:0000359!5.42e-09!32;CL:0000076!1.14e-08!62;CL:0000144!8.50e-08!625;CL:0002076!1.24e-07!43;CL:1000449!1.64e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.46e-08;32!CL:1000449;1.75e-08;15!CL:1000497;2.13e-07;17!CL:0002518;2.13e-07;17!CL:0002681;3.78e-07;12!CL:0002584;3.78e-07;12!CL:0000192;4.56e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.35e-25,250;CL:0000066,2.10e-23,253;CL:0000222,2.35e-16,121;CL:0000393,2.22e-10,61;CL:0000211,2.22e-10,61;CL:0000192,9.63e-10,43;CL:0000514,9.63e-10,43;CL:0000187,1.25e-09,55;CL:0000680,1.40e-09,58;CL:0000056,1.40e-09,58;CL:0000355,1.40e-09,58;CL:0000359,5.41e-09,32;CL:0000076,8.66e-09,63;CL:1000449,2.07e-08,15;CL:0002076,1.61e-07,42;CL:1000497,1.97e-07,17;CL:0002518,1.97e-07,17;CL:0002681,4.18e-07,12;CL:0002584,4.18e-07,12;CL:0000213,9.77e-07,58;CL:0000215,9.77e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.56e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.38e-12!138;UBERON:0002049!1.53e-11!79;UBERON:0007798!1.53e-11!79;UBERON:0003104!1.60e-11!238;UBERON:0009142!1.60e-11!238;UBERON:0003914!4.44e-11!118;UBERON:0000055!1.13e-10!69;UBERON:0005256!5.83e-10!143;UBERON:0001981!6.19e-10!60;UBERON:0007500!6.19e-10!60;UBERON:0004537!6.19e-10!60;UBERON:0006965!6.19e-10!60;UBERON:0000486!2.38e-09!82;UBERON:0001637!5.51e-09!42;UBERON:0003509!5.51e-09!42;UBERON:0004572!5.51e-09!42;UBERON:0004872!1.47e-08!84;UBERON:0001134!4.17e-08!61;UBERON:0002036!4.17e-08!61;UBERON:0003082!4.17e-08!61;UBERON:0002100!4.93e-08!216;UBERON:0006554!5.32e-08!44;UBERON:0004290!8.04e-08!70;UBERON:0004535!9.10e-08!110;UBERON:0000914!1.17e-07!83;UBERON:0002329!1.17e-07!83;UBERON:0003077!1.17e-07!83;UBERON:0003059!1.17e-07!83;UBERON:0007282!1.17e-07!83;UBERON:0009618!1.17e-07!83;UBERON:0007285!1.17e-07!83;UBERON:0001008!1.21e-07!45;UBERON:0004211!1.64e-07!16;UBERON:0001285!1.64e-07!16;UBERON:0007684!1.64e-07!16;UBERON:0003220!1.64e-07!16;UBERON:0004208!1.64e-07!16;UBERON:0001009!3.22e-07!113;UBERON:0002385!3.25e-07!63;UBERON:0001015!3.25e-07!63;UBERON:0000383!3.25e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.75e-09;30!UBERON:0001008;4.75e-09;30!UBERON:0006555;1.75e-08;15!UBERON:0004819;1.75e-08;15!UBERON:0001285;1.75e-08;15!UBERON:0007684;1.75e-08;15!UBERON:0003914;2.61e-08;74!UBERON:0002113;1.58e-07;24!UBERON:0011143;1.58e-07;24!UBERON:0001225;3.78e-07;12!UBERON:0008987;3.78e-07;12!UBERON:0007500;6.24e-07;56!UBERON:0001981;6.24e-07;56!UBERON:0004537;6.24e-07;56!UBERON:0000353;9.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.16e-12,148;UBERON:0003914,2.20e-11,117;UBERON:0002049,2.26e-11,78;UBERON:0007798,2.26e-11,78;UBERON:0003104,8.53e-11,160;UBERON:0009142,8.53e-11,160;UBERON:0000055,1.65e-10,68;UBERON:0007503,4.61e-10,78;UBERON:0007500,9.03e-10,59;UBERON:0001981,9.03e-10,59;UBERON:0004537,9.03e-10,59;UBERON:0006965,9.03e-10,59;UBERON:0006554,4.72e-09,47;UBERON:0000486,5.06e-09,83;UBERON:0001637,5.51e-09,42;UBERON:0003509,5.51e-09,42;UBERON:0004572,5.51e-09,42;UBERON:0001008,1.13e-08,48;UBERON:0004211,2.07e-08,15;UBERON:0009773,2.07e-08,15;UBERON:0001231,2.07e-08,15;UBERON:0001285,2.07e-08,15;UBERON:0007684,2.07e-08,15;UBERON:0004208,2.07e-08,15;UBERON:0004872,2.10e-08,83;UBERON:0002100,3.14e-08,199;UBERON:0001134,9.37e-08,62;UBERON:0002036,9.37e-08,62;UBERON:0003082,9.37e-08,62;UBERON:0005256,1.07e-07,122;UBERON:0004535,1.27e-07,109;UBERON:0002329,1.66e-07,71;UBERON:0003059,1.66e-07,71;UBERON:0007282,1.66e-07,71;UBERON:0004290,1.66e-07,71;UBERON:0009618,1.66e-07,71;UBERON:0006555,2.05e-07,16;UBERON:0004819,2.05e-07,16;UBERON:0001225,4.18e-07,12;UBERON:0008987,4.18e-07,12;UBERON:0001009,4.44e-07,112;UBERON:0003077,4.87e-07,72;UBERON:0007285,4.87e-07,72;UBERON:0007524,6.37e-07,73;UBERON:0002385,6.71e-07,64;UBERON:0001015,6.71e-07,64;UBERON:0000383,6.71e-07,64 | |||
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| |||
|short_description=p2@CLPP | |||
}} |
Revision as of 20:49, 20 January 2014
Short description: | p2@CLPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLPP_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_DQ895823, EU176368_5end |
EntrezGene: | CLPP |
HGNC: | 2084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.35e-25 | 250 |
epithelial cell | 2.10e-23 | 253 |
mesodermal cell | 2.35e-16 | 121 |
electrically responsive cell | 2.22e-10 | 61 |
electrically active cell | 2.22e-10 | 61 |
smooth muscle cell | 9.63e-10 | 43 |
smooth muscle myoblast | 9.63e-10 | 43 |
muscle cell | 1.25e-09 | 55 |
muscle precursor cell | 1.40e-09 | 58 |
myoblast | 1.40e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-09 | 58 |
vascular associated smooth muscle cell | 5.41e-09 | 32 |
squamous epithelial cell | 8.66e-09 | 63 |
epithelial cell of nephron | 2.07e-08 | 15 |
endo-epithelial cell | 1.61e-07 | 42 |
kidney cell | 1.97e-07 | 17 |
kidney epithelial cell | 1.97e-07 | 17 |
kidney cortical cell | 4.18e-07 | 12 |
renal cortical epithelial cell | 4.18e-07 | 12 |
lining cell | 9.77e-07 | 58 |
barrier cell | 9.77e-07 | 58 |