FFCP PHASE1:Hg19::chr2:43019675..43019690,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23498 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4796 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000404451_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_HAAO_5end | |||
|id=chr2:43019675..43019690,- | |||
|ontology_enrichment_celltype=CL:0000557!2.84e-30!71;CL:0000766!4.93e-30!76;CL:0000839!2.07e-28!70;CL:0002194!1.12e-26!63;CL:0000576!1.12e-26!63;CL:0000040!1.12e-26!63;CL:0000559!1.12e-26!63;CL:0002009!3.92e-26!65;CL:0002057!5.60e-22!42;CL:0000763!1.52e-21!112;CL:0000049!1.52e-21!112;CL:0000860!3.35e-19!45;CL:0002031!1.85e-16!124;CL:0000738!5.75e-16!140;CL:0002087!4.99e-15!119;CL:0000037!1.09e-14!172;CL:0000566!1.09e-14!172;CL:0002032!1.31e-14!165;CL:0000837!1.31e-14!165;CL:0000988!7.66e-14!182 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.20e-21;39!CL:0000234;1.20e-21;39!CL:0000766;9.87e-20;69!CL:0000576;1.23e-19;48!CL:0000860;1.76e-18;33!CL:0002057;1.76e-18;33!CL:0000763;2.50e-10;100!CL:0000235;3.57e-09;6!CL:0000738;6.60e-08;136!CL:0000097;7.65e-08;5!CL:0002393;7.97e-07;6!CL:0002397;7.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.92e-45,72;CL:0000557,9.56e-45,67;CL:0000839,1.80e-43,66;CL:0002194,3.03e-39,59;CL:0000576,3.03e-39,59;CL:0000040,3.03e-39,59;CL:0000559,3.03e-39,59;CL:0002009,1.86e-37,61;CL:0000473,1.96e-33,48;CL:0000234,1.96e-33,48;CL:0000763,2.19e-32,108;CL:0000049,2.19e-32,108;CL:0000860,3.30e-26,42;CL:0002057,3.30e-26,42;CL:0002031,1.78e-24,120;CL:0000738,3.20e-23,136;CL:0002032,2.52e-22,161;CL:0000837,2.52e-22,161;CL:0000037,1.59e-21,168;CL:0002087,2.57e-20,115;CL:0000988,2.19e-19,177;CL:0000235,2.82e-09,6;CL:0000097,7.84e-08,5;CL:0002028,7.84e-08,5;CL:0002393,2.06e-07,9;CL:0002397,2.06e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.60e-19;42!CL:0000049;6.81e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-26!102;UBERON:0003061!1.51e-26!102;UBERON:0002371!3.07e-26!80;UBERON:0002405!1.07e-25!115;UBERON:0001474!4.42e-23!86;UBERON:0002193!1.27e-22!112;UBERON:0004765!1.04e-19!101;UBERON:0001434!1.04e-19!101;UBERON:0002204!4.02e-11!167;UBERON:0007023!9.82e-10!115;UBERON:0003081!5.66e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.34e-09;17!UBERON:0002107;9.56e-07;19!UBERON:0006925;9.56e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.87e-39,76;UBERON:0001474,4.16e-35,82;UBERON:0002390,6.67e-33,98;UBERON:0003061,6.67e-33,98;UBERON:0004765,1.94e-30,90;UBERON:0002405,2.83e-30,93;UBERON:0002193,3.91e-28,108;UBERON:0001434,7.57e-28,100;UBERON:0003081,6.03e-16,203;UBERON:0002204,5.06e-15,167;UBERON:0000926,8.50e-10,315;UBERON:0004120,8.50e-10,315;UBERON:0006603,8.50e-10,315;UBERON:0000160,2.34e-09,17;UBERON:0000059,4.09e-07,11;UBERON:0001155,4.56e-07,9;UBERON:0002107,9.01e-07,19;UBERON:0006925,9.01e-07,19;UBERON:0008836,9.01e-07,19 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,1.52908960491121,0.527533956456907,0,0.331397375727916,0,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0,0.273748850145768,0.753255837568817,1.22261449196722,1.9704141467987,1.10195093839151,0.786728553697808,1.15148819429164,1.39334510984468,0,0,0,0,0,3.22960483268332,1.10799081706375,1.40381113229099,1.51907609501096,4.25439401055856,5.18229865630367,2.83333124397605,2.03557534291391,2.26725566213286,2.18325655069035,1.39457422143411,2.05583944010913,0.619412741790207,0.575384784644301,2.30544635876191,3.31075121844019,2.41321976515633,3.22742341791913,1.35426486594342,1.69418105588344,0.818718450173537,0.898893937780338,2.44867113896722,1.92557416245656,3.19668562899521,1.9791078011203,0.997318288108159,1.27867425159808,2.61188314765726,2.26954089876456,0.622822248995575,2.00998932205395,1.0429658368404,1.3031330682307,1.81619850790011,2.20966581592539,1.89877432464531,1.69004229049553,1.4882300997553,2.72556239160889,1.34794357375794,3.75442232103766,0.964353520182481,1.71007646244749,0.59675003159727,1.0959849225878,0,0.546138611262131,0,0.426730222566507,1.60158394814405,0.574752439954483,0.661044872784862,2.86216126360609,0,0,0,0,0,2.37045676297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0,3.6019245761871,0,0.370784442784429,3.8945687238562,4.00498395788315,10.1048049994338,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0,0.368502951935304,0.206651562351531,0,0.741800787835671,0,0,0.336672227908132,0,0,0.877955241761676,0,1.05166641234618,0,0.89694817844431,0.213557388818567,0,0,0,0.257640540045629,0.37223371266318,0,0,0.504867548488229,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0.121973706129595,0.795178609928912,0.464775771478074,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,43.0967118394225,7.86261773342101,14.1789577603537,0,5.16551441881077,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.34779121492523,0,0,0,0,0,0,1.72351904261178,10.2961876661265,3.71577905721821,0,0,0,0,0,0,1.47798971368783,3.08169519046291,4.97587477297853,5.90891809009542,4.16600030307054,0,0,0,1.71072446022705,0,0.300343057843917,0,0.336393253036082,0,0.2933531432838,0,7.15312891703765,0,0,0,0.257207374262142,0,0,0.142977993658148,2.71310802695722,0,0,0,0,0,0,0,8.51366464488333,5.52482800575339,2.10833939483032,0,0,0,0,0,0,0,0.591092280605782,0,0.128343036279748,0.508189248444927,0,0,0,0,4.49404214368309,0,1.24324654030811,0.36807447515742,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0.979005787313703,0.343143423810856,0.206768026122887,0.647142602455851,0.533637789017222,4.24378600024763,4.99306318531491,3.32629322662648,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0,0,0,4.23008073570678,0,0,0,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,1.02580050046556,0,0,13.7044545491471,0,0,0,0,0,0.386682873168488,0.462145851343933,0.15350367472613,0.413509717453592,0.537101224341368,0.725083469571143,0.681813019328807,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.767693373934002,0.42793898803392,0,0,1.79872457583315,1.64722217841633,0.471249609382746,0,0,0,0.975267478179181,0,0,0.272999822815972,0,0,0,0,0,1.15755106853338,0,0,0.30982349809975,0,0.286822704408103,0,0,0,1.05553817648832,0,0.379473173765715,2.0996083214699,0,0,0,13.9332825149633,0,0,0,0,1.01489521846434,0,2.27858874869665,0.952927101831156,0.822724546172388,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0.5745161103971,0,1.29848776109822,0.561594356226918,2.73881614839831,0.156679895773023,5.01268954180134,0,0,0.605399121573143,6.38769356535489,0.687010689511529,1.84344458585075,0.671028323677248,1.50164227540718,1.9538809540204,0,0,0,0,0,0.561421621224659,1.31857361344705,0,0,0,0,1.18785872333055,0,0,0.562677665642051,0,0,0.422250816255987,4.5827037297746,4.69682656402951,1.25966373927138,0,0.738508832766417,0,0,0,0,1.479651084554,0,0,2.90799823828566,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.438770794307945,0,0,1.00035336054936,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0.332423363800313,0,0,0,0,0,0,0.163232808159148,1.55488378577335,0,2.98578579323551,2.83064206410685,5.49927130440263,0,0,0,0.337005664903385,2.40773294189637,0.468528891450678,0,0,0,0.394584402849391,3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| |||
|short_description=p2@HAAO | |||
}} |
Revision as of 02:48, 21 January 2014
Short description: | p2@HAAO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HAAO_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -4bp_to_ENST00000404451_5end |
EntrezGene: | HAAO |
HGNC: | 4796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.92e-45 | 72 |
granulocyte monocyte progenitor cell | 9.56e-45 | 67 |
myeloid lineage restricted progenitor cell | 1.80e-43 | 66 |
monopoietic cell | 3.03e-39 | 59 |
monocyte | 3.03e-39 | 59 |
monoblast | 3.03e-39 | 59 |
promonocyte | 3.03e-39 | 59 |
macrophage dendritic cell progenitor | 1.86e-37 | 61 |
defensive cell | 1.96e-33 | 48 |
phagocyte | 1.96e-33 | 48 |
myeloid cell | 2.19e-32 | 108 |
common myeloid progenitor | 2.19e-32 | 108 |
classical monocyte | 3.30e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.30e-26 | 42 |
hematopoietic lineage restricted progenitor cell | 1.78e-24 | 120 |
leukocyte | 3.20e-23 | 136 |
hematopoietic oligopotent progenitor cell | 2.52e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-22 | 161 |
hematopoietic stem cell | 1.59e-21 | 168 |
nongranular leukocyte | 2.57e-20 | 115 |
hematopoietic cell | 2.19e-19 | 177 |
macrophage | 2.82e-09 | 6 |
mast cell | 7.84e-08 | 5 |
basophil mast progenitor cell | 7.84e-08 | 5 |
intermediate monocyte | 2.06e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.87e-39 | 76 |
bone element | 4.16e-35 | 82 |
hematopoietic system | 6.67e-33 | 98 |
blood island | 6.67e-33 | 98 |
skeletal element | 1.94e-30 | 90 |
immune system | 2.83e-30 | 93 |
hemolymphoid system | 3.91e-28 | 108 |
skeletal system | 7.57e-28 | 100 |
lateral plate mesoderm | 6.03e-16 | 203 |
musculoskeletal system | 5.06e-15 | 167 |
mesoderm | 8.50e-10 | 315 |
mesoderm-derived structure | 8.50e-10 | 315 |
presumptive mesoderm | 8.50e-10 | 315 |
intestine | 2.34e-09 | 17 |
large intestine | 4.09e-07 | 11 |
colon | 4.56e-07 | 9 |
liver | 9.01e-07 | 19 |
digestive gland | 9.01e-07 | 19 |
liver bud | 9.01e-07 | 19 |