FFCP PHASE1:Hg19::chr20:48807648..48807671,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1834 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=272bp_to_uc002xvh.2_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_9_at_CEBPB_5end | |||
|id=chr20:48807648..48807671,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.23e-28!42;CL:0000860!7.00e-27!45;CL:0000766!1.80e-24!76;CL:0002194!3.81e-23!63;CL:0000576!3.81e-23!63;CL:0000040!3.81e-23!63;CL:0000559!3.81e-23!63;CL:0002009!3.22e-21!65;CL:0000839!6.56e-19!70;CL:0000557!1.01e-17!71;CL:0000763!1.07e-08!112;CL:0000049!1.07e-08!112;CL:0002320!7.30e-08!365;CL:0002393!8.82e-07!9;CL:0002397!8.82e-07!9;CL:0000134!9.33e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.65e-31;33!CL:0002057;9.65e-31;33!CL:0000473;2.11e-28;39!CL:0000234;2.11e-28;39!CL:0000576;1.02e-22;48!CL:0000766;1.99e-18;69!CL:0000094;4.66e-08;8!CL:0000136;1.04e-07;13!CL:0000763;5.16e-07;100!CL:0002393;7.69e-07;6!CL:0002397;7.69e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.53e-45,48;CL:0000234,4.53e-45,48;CL:0000860,5.89e-42,42;CL:0002057,5.89e-42,42;CL:0000766,1.42e-37,72;CL:0002194,2.38e-35,59;CL:0000576,2.38e-35,59;CL:0000040,2.38e-35,59;CL:0000559,2.38e-35,59;CL:0002009,1.74e-33,61;CL:0000839,2.41e-29,66;CL:0000557,1.35e-28,67;CL:0000763,2.45e-17,108;CL:0000049,2.45e-17,108;CL:0002320,1.07e-12,361;CL:0000738,2.22e-11,136;CL:0000134,5.51e-11,354;CL:0002087,1.01e-10,115;CL:0002393,1.68e-09,9;CL:0002397,1.68e-09,9;CL:0000219,3.88e-09,386;CL:0000048,1.19e-08,427;CL:0000136,2.82e-08,15;CL:0000094,3.75e-08,8;CL:0000723,4.92e-08,433;CL:0002031,5.03e-08,120;CL:0000034,7.77e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-30;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.00e-15!80;UBERON:0001474!4.14e-14!86;UBERON:0004765!2.61e-13!101;UBERON:0001434!2.61e-13!101;UBERON:0002390!4.40e-13!102;UBERON:0003061!4.40e-13!102;UBERON:0002405!5.19e-12!115;UBERON:0000926!5.21e-12!448;UBERON:0004120!5.21e-12!448;UBERON:0006603!5.21e-12!448;UBERON:0002204!4.62e-11!167;UBERON:0002193!8.13e-11!112;UBERON:0002384!1.24e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.00e-25,76;UBERON:0004765,1.38e-23,90;UBERON:0001474,1.39e-22,82;UBERON:0001434,8.13e-21,100;UBERON:0002390,8.16e-21,98;UBERON:0003061,8.16e-21,98;UBERON:0002193,9.89e-18,108;UBERON:0002405,1.14e-17,93;UBERON:0002204,1.39e-13,167;UBERON:0002384,1.30e-12,371;UBERON:0000926,3.54e-09,315;UBERON:0004120,3.54e-09,315;UBERON:0006603,3.54e-09,315;UBERON:0003081,2.20e-08,203 | |||
|phase1_expression=2.72517568905835,2.35510576280081,3.80576891059122,2.00146596706261,2.68176656656373,0,5.06599756336621,0.631719873426831,2.08948502559871,1.47440361900905,1.39560233594486,0.655324116390517,0.527533956456907,1.73272894144065,3.97676850873499,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,5.50709987588466,1.53531759238885,3.71558695958582,0.919421224478927,0.6024118375565,1.10926203050036,0.0774672005803016,0,0,2.76997704265939,6.21687787157439,4.34021741431704,0.895661896959697,0.32389366601898,1.03030227053675,4.79814187972564,7.935394817465,5.33684934613196,10.9241647345672,20.9695622891131,16.7241440283356,12.0830804775303,10.7587496742222,14.8983804829809,6.55016793399575,12.2642089880927,10.8341189275473,13.9299331261527,18.5576182039335,13.9328560355952,8.26426509401437,19.2557416245656,8.31138263538754,4.94776950280074,10.1726465387032,2.98357325372886,17.1223450790865,12.4824749432051,10.5879782329248,13.3161792586074,15.1230046341858,12.5969529928968,6.65939452896706,18.4138817993782,10.1267963981083,9.0839773114135,9.779797798392,7.12839394728478,5.39177429503177,5.40636814229423,4.66104201421532,4.84521664360123,5.9675003159727,7.67189445811463,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0.786021525498329,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0.766440987203842,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,2.43806866313962,2.01210257911091,0.383587685530591,1.44575660953827,1.00267582127178,1.15877215168659,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.527008714158756,0.589405839739707,2.18577172975525,0.370784442784429,0.97364218096405,0.348259474598534,1.19662164466979,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,7.9068250461638,7.75560528296651,1.3082821564276,0.496971951695318,0.25326102332916,1.19168262731897,1.14734648299525,0.354668382198357,1.12135520028461,0,0.49333509683432,0.622422070799533,0.538842688278752,0.326923806226917,0.454072282934794,0,2.81185718200556,3.74592092196385,1.1409436430889,2.98897361103602,0.23486899728753,0.647491777472526,0,0.816616685019573,0.491337269247072,1.23990937410919,1.18800285728205,2.47266929278557,0.910161361938026,2.15585442544872,0.168336113954066,0.625592599359821,0,0.877955241761676,0.612975591598039,3.45547535485173,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0.412210116953756,0,0.37223371266318,0.168776332241266,0.389748020644795,0,0.736399189138395,0.323292113637624,1.06502877754984,0.302256294682921,0,0.57978255948989,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,1.7662459561294,0,0,0,0,2.3218396401599,1.44375896333917,0.236613600079688,0.168584690078102,0,0.441175890929576,0.435758888184812,0,0.539325232640658,0,0,0,0,0.4115740113314,1.47008711385542,0,2.94848165003288,2.36315962672562,0,0.122988438543114,0.514703430895577,0.878002283269004,0,0.301586917234893,0,1.3032332212413,1.03993478527958,1.44331342025273,0.231860809950154,0.469634776943287,0.144366447761074,0.462985512576611,0.190254152234598,0,0.858486162094873,1.23108503043699,3.97807250736704,3.12125440806329,0.93733833986777,0.16798212819886,0,2.05984602216551,0.581267877027924,1.15014803749563,0,0.088048434013226,0,0.576479813667846,0.37872730027914,0.317489471460845,0,0,0,0.102827492703324,0,0.285826432630578,0.784917590417525,0.87192013766656,0.1466765716419,1.42198887333556,3.57656445851882,0,1.59562869950922,0,0.257207374262142,0,0.799266537048298,1.71573592389777,4.34097284313154,0.823240336780769,0.325736184293735,2.13235169245527,0.791951872933429,5.12446941001296,4.35766729300147,4.99864955910285,1.2162378064119,1.50677127429638,4.21667878966063,0.958499421966331,1.14861935834114,0,0.723906533337896,0.61642896765115,1.25342674267927,0.560425719967636,0.591092280605782,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,5.24304916763028,5.9832291840805,6.21623270154053,1.71768088406796,1.50051156317903,1.62759014219841,1.24782516918484,1.24900292158013,0.946214490203608,0.585707074963566,0.300946099727719,15.9185252839189,1.03473071292505,0,0.921845842708516,0.868836144680828,3.32861967686659,0.343143423810856,1.44737618286021,2.37285620900479,1.81436848265855,0,1.66435439510497,0.604780586659361,2.23297027036899,0.767309866440312,1.12264037773229,3.20347873139252,0.511707249066704,0.482561763430822,0,0.308419387605311,1.06537035187876,0.9033987161519,1.03850885836724,0.348631135379878,0.241718899183244,0.40101294060657,1.19705285616665,0.803701137152247,0.364182336013434,1.44236856455367,0,0.385076685522074,1.56869953835371,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0.219259876645935,0,0,0.328014645699706,1.30151357865721,2.67906630284078,0.0915694648183434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| |||
|short_description=p9@CEBPB | |||
}} |
Revision as of 12:01, 21 January 2014
Short description: | p9@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CEBPB_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 272bp_to_uc002xvh.2_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.53e-45 | 48 |
phagocyte | 4.53e-45 | 48 |
classical monocyte | 5.89e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.89e-42 | 42 |
myeloid leukocyte | 1.42e-37 | 72 |
monopoietic cell | 2.38e-35 | 59 |
monocyte | 2.38e-35 | 59 |
monoblast | 2.38e-35 | 59 |
promonocyte | 2.38e-35 | 59 |
macrophage dendritic cell progenitor | 1.74e-33 | 61 |
myeloid lineage restricted progenitor cell | 2.41e-29 | 66 |
granulocyte monocyte progenitor cell | 1.35e-28 | 67 |
myeloid cell | 2.45e-17 | 108 |
common myeloid progenitor | 2.45e-17 | 108 |
connective tissue cell | 1.07e-12 | 361 |
leukocyte | 2.22e-11 | 136 |
mesenchymal cell | 5.51e-11 | 354 |
nongranular leukocyte | 1.01e-10 | 115 |
intermediate monocyte | 1.68e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.68e-09 | 9 |
motile cell | 3.88e-09 | 386 |
multi fate stem cell | 1.19e-08 | 427 |
fat cell | 2.82e-08 | 15 |
granulocyte | 3.75e-08 | 8 |
somatic stem cell | 4.92e-08 | 433 |
hematopoietic lineage restricted progenitor cell | 5.03e-08 | 120 |
stem cell | 7.77e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.00e-25 | 76 |
skeletal element | 1.38e-23 | 90 |
bone element | 1.39e-22 | 82 |
skeletal system | 8.13e-21 | 100 |
hematopoietic system | 8.16e-21 | 98 |
blood island | 8.16e-21 | 98 |
hemolymphoid system | 9.89e-18 | 108 |
immune system | 1.14e-17 | 93 |
musculoskeletal system | 1.39e-13 | 167 |
connective tissue | 1.30e-12 | 371 |
mesoderm | 3.54e-09 | 315 |
mesoderm-derived structure | 3.54e-09 | 315 |
presumptive mesoderm | 3.54e-09 | 315 |
lateral plate mesoderm | 2.20e-08 | 203 |