FFCP PHASE1:Hg19::chr3:52529994..52530017,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_at_chr3:52529994..52530017,+ | |||
|id=chr3:52529994..52530017,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.91e-51!42;CL:0002194!5.54e-50!63;CL:0000576!5.54e-50!63;CL:0000040!5.54e-50!63;CL:0000559!5.54e-50!63;CL:0000766!1.00e-48!76;CL:0002009!5.76e-48!65;CL:0000839!1.51e-47!70;CL:0000860!4.14e-47!45;CL:0000557!1.19e-46!71;CL:0000763!9.08e-32!112;CL:0000049!9.08e-32!112;CL:0000738!5.54e-23!140;CL:0002087!1.66e-22!119;CL:0002031!5.81e-21!124;CL:0000037!3.48e-18!172;CL:0000566!3.48e-18!172;CL:0000988!4.08e-17!182;CL:0002032!6.08e-17!165;CL:0000837!6.08e-17!165;CL:0000115!8.36e-13!35;CL:0002139!5.23e-11!24;CL:0000071!2.59e-10!18;CL:0002546!2.59e-10!18;CL:0002078!4.49e-09!44 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.63e-104;33!CL:0002057;3.63e-104;33!CL:0000473;4.12e-82;39!CL:0000234;4.12e-82;39!CL:0000576;4.86e-57;48!CL:0000766;5.28e-31;69!CL:0000763;3.70e-16;100!CL:0002087;9.85e-13;104!CL:0000738;4.98e-10;136!CL:0000346;9.91e-07;3!CL:1000428;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.57e-101,42;CL:0002057,3.57e-101,42;CL:0000473,2.45e-99,48;CL:0000234,2.45e-99,48;CL:0002194,7.14e-83,59;CL:0000576,7.14e-83,59;CL:0000040,7.14e-83,59;CL:0000559,7.14e-83,59;CL:0002009,5.79e-80,61;CL:0000839,1.89e-73,66;CL:0000557,2.90e-72,67;CL:0000766,8.21e-67,72;CL:0000763,4.05e-45,108;CL:0000049,4.05e-45,108;CL:0002087,2.59e-39,115;CL:0002031,2.21e-37,120;CL:0000738,2.77e-34,136;CL:0000037,3.41e-28,168;CL:0002032,6.82e-28,161;CL:0000837,6.82e-28,161;CL:0000988,2.22e-26,177;CL:0000134,4.60e-11,354;CL:0002320,1.07e-10,361;CL:0000219,2.14e-09,386;CL:0000048,8.28e-08,427;CL:0000723,1.37e-07,433;CL:0000034,2.63e-07,441;CL:0000346,9.07e-07,3;CL:1000428,9.07e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.22e-73;42!CL:0000049;3.59e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.72e-43!112;UBERON:0002371!4.26e-43!80;UBERON:0002390!1.69e-42!102;UBERON:0003061!1.69e-42!102;UBERON:0001474!6.26e-39!86;UBERON:0002405!5.94e-34!115;UBERON:0004765!1.05e-30!101;UBERON:0001434!1.05e-30!101;UBERON:0003081!2.42e-30!216;UBERON:0002204!1.32e-14!167;UBERON:0000926!4.52e-11!448;UBERON:0004120!4.52e-11!448;UBERON:0006603!4.52e-11!448;UBERON:0001986!2.59e-10!18;UBERON:0004638!2.59e-10!18;UBERON:0004852!2.59e-10!18;UBERON:0000467!4.34e-08!625;UBERON:0000480!4.97e-08!626;UBERON:0000487!6.71e-08!22;UBERON:0000468!4.68e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;9.91e-07;3!UBERON:0001992;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.83e-63,76;UBERON:0001474,7.05e-58,82;UBERON:0004765,3.83e-52,90;UBERON:0002405,3.04e-50,93;UBERON:0002390,2.47e-47,98;UBERON:0003061,2.47e-47,98;UBERON:0001434,2.99e-46,100;UBERON:0002193,2.59e-42,108;UBERON:0003081,6.76e-27,203;UBERON:0002204,7.58e-25,167;UBERON:0000926,7.59e-18,315;UBERON:0004120,7.59e-18,315;UBERON:0006603,7.59e-18,315;UBERON:0002384,3.42e-10,371;UBERON:0000412,9.07e-07,3;UBERON:0001992,9.07e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,1.66198622559563,0.601633342410425,1.30206522429511,0.671746422719773,0.32389366601898,0.77272670290256,19.9195587128004,23.0504325650174,21.10481332334,12.551167992907,7.81218987241469,7.74265927237759,15.247696793074,16.6504459243915,10.8781825748749,3.10271112662957,3.22742341791913,0,20.1419303310587,13.3724013528344,11.4608977066993,5.50951006267625,5.77672248736969,7.03270838378945,43.8702229248332,29.5206213280015,40.4913513006059,2.61188314765726,3.40431134814684,2.4912889959823,18.0899038984855,21.9022825736485,19.9813737128707,1.21079900526674,1.84138817993782,0.949387162322653,0,0.212604299965044,0.209658645508376,0.673971786878971,1.95229960693958,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0.97364218096405,1.0447784237956,0.531831842075461,0,1.14398982156026,0,0.596287222100115,0,0,1.69592382577203,0.838998872419812,0,0.626984899610432,0.258416759169329,0,0,0,1.52054421143703,0,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,4.5994991239765,0,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,1.23108503043699,0.234004265139238,1.18904929830983,0,0,0,0,0,0,0,0,0,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4120015221269,0.850468526382578,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,2.50634477090067,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.410716136675979,0,0,0,0,0,1.43574604915363,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0.563903507879121,0.322289439867886,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0,1.33151354837103,0,0 | |||
|short_description=p@chr3:52529994..52530017,+ | |||
}} |
Revision as of 19:11, 21 January 2014
Short description: | p@chr3:52529994..52530017, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:52529994..52530017, + |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.57e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-101 | 42 |
defensive cell | 2.45e-99 | 48 |
phagocyte | 2.45e-99 | 48 |
monopoietic cell | 7.14e-83 | 59 |
monocyte | 7.14e-83 | 59 |
monoblast | 7.14e-83 | 59 |
promonocyte | 7.14e-83 | 59 |
macrophage dendritic cell progenitor | 5.79e-80 | 61 |
myeloid lineage restricted progenitor cell | 1.89e-73 | 66 |
granulocyte monocyte progenitor cell | 2.90e-72 | 67 |
myeloid leukocyte | 8.21e-67 | 72 |
myeloid cell | 4.05e-45 | 108 |
common myeloid progenitor | 4.05e-45 | 108 |
nongranular leukocyte | 2.59e-39 | 115 |
hematopoietic lineage restricted progenitor cell | 2.21e-37 | 120 |
leukocyte | 2.77e-34 | 136 |
hematopoietic stem cell | 3.41e-28 | 168 |
hematopoietic oligopotent progenitor cell | 6.82e-28 | 161 |
hematopoietic multipotent progenitor cell | 6.82e-28 | 161 |
hematopoietic cell | 2.22e-26 | 177 |
mesenchymal cell | 4.60e-11 | 354 |
connective tissue cell | 1.07e-10 | 361 |
motile cell | 2.14e-09 | 386 |
multi fate stem cell | 8.28e-08 | 427 |
somatic stem cell | 1.37e-07 | 433 |
stem cell | 2.63e-07 | 441 |
hair follicle dermal papilla cell | 9.07e-07 | 3 |
stem cell of epidermis | 9.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.83e-63 | 76 |
bone element | 7.05e-58 | 82 |
skeletal element | 3.83e-52 | 90 |
immune system | 3.04e-50 | 93 |
hematopoietic system | 2.47e-47 | 98 |
blood island | 2.47e-47 | 98 |
skeletal system | 2.99e-46 | 100 |
hemolymphoid system | 2.59e-42 | 108 |
lateral plate mesoderm | 6.76e-27 | 203 |
musculoskeletal system | 7.58e-25 | 167 |
mesoderm | 7.59e-18 | 315 |
mesoderm-derived structure | 7.59e-18 | 315 |
presumptive mesoderm | 7.59e-18 | 315 |
connective tissue | 3.42e-10 | 371 |
dermal papilla | 9.07e-07 | 3 |
papillary layer of dermis | 9.07e-07 | 3 |