FFCP PHASE1:Hg19::chr3:71834168..71834182,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18455 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HC23 | |||
|association_with_transcript=5bp_to_AF182069_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_PROK2_5end | |||
|id=chr3:71834168..71834182,- | |||
|ontology_enrichment_celltype=CL:0000037!2.18e-32!172;CL:0000566!2.18e-32!172;CL:0002057!2.26e-31!42;CL:0002032!7.56e-30!165;CL:0000837!7.56e-30!165;CL:0000988!2.00e-29!182;CL:0000860!1.39e-28!45;CL:0000738!3.00e-28!140;CL:0000766!2.92e-25!76;CL:0000763!4.91e-25!112;CL:0000049!4.91e-25!112;CL:0002087!2.28e-24!119;CL:0002031!1.68e-20!124;CL:0002194!1.86e-18!63;CL:0000576!1.86e-18!63;CL:0000040!1.86e-18!63;CL:0000559!1.86e-18!63;CL:0002009!1.35e-17!65;CL:0000839!8.04e-17!70;CL:0000557!2.58e-15!71;CL:0000094!7.41e-15!8;CL:0000791!6.04e-11!18;CL:0000789!6.04e-11!18;CL:0002420!6.04e-11!18;CL:0002419!6.04e-11!18;CL:0000790!6.04e-11!18;CL:0000081!2.97e-10!11;CL:0000625!3.87e-09!11;CL:0000084!2.11e-08!25;CL:0000827!2.11e-08!25;CL:0000775!6.66e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;5.66e-29;8!CL:0000860;9.48e-25;33!CL:0002057;9.48e-25;33!CL:0000081;8.27e-21;11!CL:0000473;1.61e-18;39!CL:0000234;1.61e-18;39!CL:0000775;1.08e-15;3!CL:0000576;3.28e-14;48!CL:0000625;3.82e-14;11!CL:0000766;1.33e-11;69!CL:0000771;6.70e-11;2!CL:0000791;2.03e-08;18!CL:0000789;2.03e-08;18!CL:0002419;2.03e-08;18!CL:0002087;2.75e-08;104!CL:0000763;3.03e-08;100!CL:0000767;4.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.07e-30,72;CL:0000094,7.30e-29,8;CL:0000860,4.09e-27,42;CL:0002057,4.09e-27,42;CL:0000738,4.53e-25,136;CL:0002032,1.98e-23,161;CL:0000837,1.98e-23,161;CL:0000473,3.08e-23,48;CL:0000234,3.08e-23,48;CL:0000763,1.82e-22,108;CL:0000049,1.82e-22,108;CL:0000037,3.68e-22,168;CL:0000081,9.93e-21,11;CL:0000988,1.13e-20,177;CL:0002194,8.15e-18,59;CL:0000576,8.15e-18,59;CL:0000040,8.15e-18,59;CL:0000559,8.15e-18,59;CL:0002009,4.07e-17,61;CL:0002087,1.19e-16,115;CL:0002031,9.77e-16,120;CL:0000775,1.08e-15,3;CL:0000839,1.49e-15,66;CL:0000557,2.87e-15,67;CL:0000625,7.20e-14,11;CL:0000771,6.72e-11,2;CL:0000791,2.94e-08,18;CL:0000789,2.94e-08,18;CL:0002420,2.94e-08,18;CL:0002419,2.94e-08,18;CL:0000790,2.94e-08,18;CL:0000767,5.61e-07,3;CL:0000134,8.16e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.09e-19;42!CL:0000790;2.03e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.13e-26!102;UBERON:0003061!1.13e-26!102;UBERON:0002193!6.00e-23!112;UBERON:0000178!9.48e-16!15;UBERON:0000179!9.48e-16!15;UBERON:0000463!9.48e-16!15;UBERON:0002371!1.46e-13!80;UBERON:0001474!5.40e-13!86;UBERON:0004765!2.03e-10!101;UBERON:0001434!2.03e-10!101;UBERON:0002405!3.76e-10!115;UBERON:0007023!1.72e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.97e-25;15!UBERON:0000179;6.97e-25;15!UBERON:0000463;6.97e-25;15!UBERON:0002390;6.22e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.25e-25,98;UBERON:0003061,1.25e-25,98;UBERON:0000178,7.03e-25,15;UBERON:0000179,7.03e-25,15;UBERON:0000463,7.03e-25,15;UBERON:0002193,1.01e-22,108;UBERON:0002371,4.84e-13,76;UBERON:0001474,7.92e-12,82;UBERON:0004765,1.84e-10,90;UBERON:0002405,5.19e-10,93;UBERON:0003081,2.17e-09,203;UBERON:0001434,4.58e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,3.83829398097213,1.23852898652861,0,0,0,0,0,0.293600439334847,1.66198622559563,2.00544447470142,0.434021741431704,0,0.32389366601898,0,1.01778767145695,0,0.727752183563449,1.85943229524548,0.822335776043652,1.23882548358041,1.43846196161075,0.256160706529101,2.12834006899727,4.82643953031266,1.29096936716765,1.35426486594342,1.69418105588344,0,0.224723484445085,3.67300670845083,0.641858054152187,1.91801137739712,0,0.199463657621632,0.426224750532694,1.7412554317715,0,0.622822248995575,1.25624332628372,0,1.95469960234605,0,0,0.632924774881769,0.211255286311942,0.425208599930087,0,0.786300418025466,1.20141514273205,0.964353520182481,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0.589211814949674,0.664601683750863,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0.766440987203842,0,0,0,0,0,1.20460095262218,1.15187950038977,1.24930726552346,1.65744076430812,2.46338399076314,0.403213486449465,1.06976078313403,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,1.50939302401662,0.128343036279748,0,0,0,0,0,29.2112739339401,17.9496875522415,78.7389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,14.7159806677329,15.2927441428475,18.2287099895732,5.47933083552915,8.63860773481008,33.0721388708286,14.040817368191,13.4831279970026,0,0,0,0,0,0,0,0.199579371432817,0,0,0,1.96558024679421,0,0.156679895773023,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,1.2558420511602,0.664846727600626,0,0,0,0,0.476809736941136,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.961086713109252,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28030075632969,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879356221798103,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.939839179798536,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.833565680400634,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0,0,0,0.190941474834495,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,1.33151354837103,0,0 | |||
|short_description=p4@PROK2 | |||
}} |
Revision as of 19:48, 21 January 2014
Short description: | p4@PROK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PROK2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 5bp_to_AF182069_5end |
EntrezGene: | PROK2 |
HGNC: | 18455 |
UniProt: | Q9HC23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.25e-25 | 98 |
blood island | 1.25e-25 | 98 |
blood | 7.03e-25 | 15 |
haemolymphatic fluid | 7.03e-25 | 15 |
organism substance | 7.03e-25 | 15 |
hemolymphoid system | 1.01e-22 | 108 |
bone marrow | 4.84e-13 | 76 |
bone element | 7.92e-12 | 82 |
skeletal element | 1.84e-10 | 90 |
immune system | 5.19e-10 | 93 |
lateral plate mesoderm | 2.17e-09 | 203 |
skeletal system | 4.58e-09 | 100 |