FFCP PHASE1:Hg19::chr3:190953512..190953525,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:190953512..190953525,- | |||
|id=chr3:190953512..190953525,- | |||
|ontology_enrichment_celltype=CL:0000359!3.85e-23!32;CL:0000192!5.44e-20!42;CL:0000514!5.44e-20!42;CL:0000055!2.72e-19!180;CL:0000680!2.74e-17!57;CL:0000056!2.74e-17!57;CL:0000355!2.74e-17!57;CL:0000187!1.91e-15!54;CL:0000183!1.43e-13!59;CL:0000393!3.10e-13!60;CL:0000211!3.10e-13!60;CL:0000048!1.55e-10!430;CL:0000723!3.94e-10!436;CL:0002539!4.88e-10!10;CL:0002594!7.08e-10!4;CL:0000034!1.31e-09!444;CL:0000057!2.16e-09!75;CL:0002595!9.32e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.40e-37;32!CL:0002594;6.29e-28;4!CL:0002595;4.22e-22;5!CL:0000192;6.78e-21;43!CL:0002593;2.22e-14;2!CL:0000187;5.76e-11;55!CL:0002592;2.91e-10;3!CL:0000945;4.52e-10;24!CL:0000393;5.22e-09;61!CL:0000211;5.22e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.60e-39,32;CL:0000192,9.74e-29,43;CL:0000514,9.74e-29,43;CL:0002594,6.75e-28,4;CL:0000680,7.54e-24,58;CL:0000056,7.54e-24,58;CL:0000355,7.54e-24,58;CL:0002595,4.85e-22,5;CL:0000187,6.91e-22,55;CL:0000393,1.80e-19,61;CL:0000211,1.80e-19,61;CL:0002593,2.73e-14,2;CL:0002592,2.98e-10,3;CL:0000945,4.20e-10,24;CL:0000826,4.20e-10,24;CL:0000222,6.32e-10,121;CL:0002539,9.25e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;6.78e-21;43!CL:0000355;1.31e-12;58 | |||
|ontology_enrichment_disease=DOID:0060084!3.39e-07!3;DOID:127!3.39e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:2513;1.05e-08;1!DOID:630;2.02e-08;1!DOID:0050177;2.02e-08;1!DOID:0050427;2.02e-08;1!DOID:2355;2.02e-08;1!DOID:4235;2.69e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.05e-08,1;DOID:2355,1.88e-08,1;DOID:630,2.17e-08,1;DOID:0050177,2.17e-08,1;DOID:0050427,2.17e-08,1;DOID:4235,3.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.34e-21!42;UBERON:0003509!1.34e-21!42;UBERON:0004572!1.34e-21!42;UBERON:0004573!6.39e-17!33;UBERON:0004571!6.39e-17!33;UBERON:0001981!7.16e-16!60;UBERON:0007500!7.16e-16!60;UBERON:0004537!7.16e-16!60;UBERON:0006965!7.16e-16!60;UBERON:0001134!1.14e-15!61;UBERON:0002036!1.14e-15!61;UBERON:0003082!1.14e-15!61;UBERON:0004290!3.05e-15!70;UBERON:0002385!6.08e-15!63;UBERON:0001015!6.08e-15!63;UBERON:0000383!6.08e-15!63;UBERON:0000914!6.02e-14!83;UBERON:0002329!6.02e-14!83;UBERON:0003077!6.02e-14!83;UBERON:0003059!6.02e-14!83;UBERON:0007282!6.02e-14!83;UBERON:0009618!6.02e-14!83;UBERON:0007285!6.02e-14!83;UBERON:0004872!1.58e-13!84;UBERON:0000055!7.22e-13!69;UBERON:0000486!6.78e-12!82;UBERON:0002049!2.27e-10!79;UBERON:0007798!2.27e-10!79;UBERON:0004237!4.88e-10!10;UBERON:0004695!4.88e-10!10;UBERON:0002111!4.88e-10!10;UBERON:0004178!4.88e-10!10;UBERON:0001310!7.08e-10!4;UBERON:0005256!1.44e-09!143;UBERON:0004535!3.09e-09!110;UBERON:0001009!8.67e-09!113;UBERON:0003102!1.05e-08!95;UBERON:0003914!3.14e-08!118;UBERON:0003834!9.32e-08!5;UBERON:0001533!9.32e-08!5;UBERON:0003513!5.30e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;6.29e-28;4!UBERON:0003834;4.22e-22;5!UBERON:0001533;4.22e-22;5!UBERON:0001637;1.45e-17;42!UBERON:0003509;1.45e-17;42!UBERON:0004572;1.45e-17;42!UBERON:0004573;3.36e-16;33!UBERON:0004571;3.36e-16;33!UBERON:0003513;7.39e-16;7!UBERON:0002456;2.22e-14;2!UBERON:0010260;1.53e-12;9!UBERON:0007500;5.99e-11;56!UBERON:0001981;5.99e-11;56!UBERON:0004537;5.99e-11;56!UBERON:0003498;2.91e-10;3!UBERON:0005985;2.91e-10;3!UBERON:0001621;2.91e-10;3!UBERON:0002049;1.02e-09;75!UBERON:0007798;1.02e-09;75!UBERON:0001301;2.69e-08;1!UBERON:0000055;2.93e-08;65!UBERON:0003914;2.53e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.74e-29,42;UBERON:0003509,1.74e-29,42;UBERON:0004572,1.74e-29,42;UBERON:0001310,6.75e-28,4;UBERON:0001134,4.01e-22,62;UBERON:0002036,4.01e-22,62;UBERON:0003082,4.01e-22,62;UBERON:0003834,4.85e-22,5;UBERON:0001533,4.85e-22,5;UBERON:0002385,2.43e-21,64;UBERON:0001015,2.43e-21,64;UBERON:0000383,2.43e-21,64;UBERON:0007500,3.20e-20,59;UBERON:0001981,3.20e-20,59;UBERON:0004537,3.20e-20,59;UBERON:0006965,3.20e-20,59;UBERON:0004573,2.99e-19,33;UBERON:0004571,2.99e-19,33;UBERON:0002329,5.95e-19,71;UBERON:0003059,5.95e-19,71;UBERON:0007282,5.95e-19,71;UBERON:0004290,5.95e-19,71;UBERON:0009618,5.95e-19,71;UBERON:0003077,1.20e-18,72;UBERON:0007285,1.20e-18,72;UBERON:0007524,2.36e-18,73;UBERON:0000055,3.43e-17,68;UBERON:0007503,5.45e-17,78;UBERON:0003513,8.16e-16,7;UBERON:0000486,8.60e-16,83;UBERON:0004872,1.01e-15,83;UBERON:0002049,1.21e-14,78;UBERON:0007798,1.21e-14,78;UBERON:0002456,2.73e-14,2;UBERON:0005256,4.56e-13,122;UBERON:0010260,1.58e-12,9;UBERON:0003914,6.41e-12,117;UBERON:0004535,2.78e-11,109;UBERON:0001009,6.66e-11,112;UBERON:0003104,1.81e-10,160;UBERON:0009142,1.81e-10,160;UBERON:0001621,2.98e-10,3;UBERON:0001301,2.89e-08,1;UBERON:0000490,1.35e-07,148;UBERON:0004237,9.25e-07,10;UBERON:0004695,9.25e-07,10;UBERON:0002111,9.25e-07,10;UBERON:0004178,9.25e-07,10;UBERON:0002100,9.69e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,1.34465029290355,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0,0,3.51501666440576,5.25443772479653,5.82459781721226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0.408308342509787,1.10550885580591,0.103325781175765,0,0,0,0,0.505008341862199,0,0.831192346452549,0,0,0,0.340296549480063,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0.403008392910561,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,2.17171960001369,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0.464841513839837,0,0,0,0.68888668898764,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,4.64845549297286,1.88887408098384,0,0,0.532306030317022,0.869932992075073,0.18532421910392,22.6137321052346,0,0,0,0,0,0,0.78494864019923,0,0,0,1.2130948894399,9.5106192703805,0,0,1.46228093778771,1.05650146756755,0.818999468447914,0.565621727814851,0,0,1.32687795048244,10.0843703608365,0,0,2.63783490051515,4.64735247149625,1.12678241012897,0,0,2.1400263088875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7719706097028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6001024709939,17.1071773213994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,2.09672001890436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,3.8102999429603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0.591420599958536,0.318593534327405,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0391253762538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0.402547587182052,3.20568492303233 | |||
|short_description=p@chr3:190953512..190953525,- | |||
}} |
Revision as of 23:19, 21 January 2014
Short description: | p@chr3:190953512..190953525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:190953512..190953525, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.60e-39 | 32 |
smooth muscle cell | 9.74e-29 | 43 |
smooth muscle myoblast | 9.74e-29 | 43 |
smooth muscle cell of the umbilical artery | 6.75e-28 | 4 |
muscle precursor cell | 7.54e-24 | 58 |
myoblast | 7.54e-24 | 58 |
multi-potent skeletal muscle stem cell | 7.54e-24 | 58 |
smooth muscle cell of the subclavian artery | 4.85e-22 | 5 |
muscle cell | 6.91e-22 | 55 |
electrically responsive cell | 1.80e-19 | 61 |
electrically active cell | 1.80e-19 | 61 |
smooth muscle cell of the internal thoracic artery | 2.73e-14 | 2 |
smooth muscle cell of the coronary artery | 2.98e-10 | 3 |
lymphocyte of B lineage | 4.20e-10 | 24 |
pro-B cell | 4.20e-10 | 24 |
mesodermal cell | 6.32e-10 | 121 |
aortic smooth muscle cell | 9.25e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.05e-08 | 1 |
anemia | 1.88e-08 | 1 |
genetic disease | 2.17e-08 | 1 |
monogenic disease | 2.17e-08 | 1 |
xeroderma pigmentosum | 2.17e-08 | 1 |
spindle cell sarcoma | 3.10e-08 | 1 |