FFCP PHASE1:Hg19::chr3:191047287..191047298,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152137 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18111 | |||
|TSSclassifier=weak | |||
|UniProt=Q8IVM0 | |||
|association_with_transcript=413bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | |||
|coexpression_cluster_id=C158 | |||
|description=CAGE_peak_11_at_CCDC50_5end | |||
|id=chr3:191047287..191047298,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.01e-15;3!CL:0000167;8.62e-12;1!CL:0000164;8.62e-12;1!CL:0000502;8.62e-12;1!CL:0000172;8.62e-12;1!CL:0000228;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0000173;8.62e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.68e-15,3;CL:0000167,6.26e-12,1;CL:0000164,6.26e-12,1;CL:0000502,6.26e-12,1;CL:0000172,6.26e-12,1;CL:0000173,6.26e-12,1;CL:0002351,6.26e-12,1;CL:0000228,7.76e-12,1;CL:0002372,7.76e-12,1 | |||
|ontology_enrichment_development_v019=CL:0002351;8.62e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;8.62e-12;1!DOID:4549;8.62e-12;1!DOID:5861;8.62e-12;1!DOID:6496;8.62e-12;1!DOID:12603;8.62e-12;1!DOID:4430;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.05e-12,1;DOID:4430,6.26e-12,1;DOID:3371,8.64e-12,1;DOID:4549,8.64e-12,1;DOID:5861,8.64e-12,1;DOID:6496,8.64e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.24e-10;10!UBERON:0000478;3.05e-07;24!UBERON:0000178;6.77e-07;15!UBERON:0000179;6.77e-07;15!UBERON:0000463;6.77e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.52e-10,10;UBERON:0000358,4.52e-10,10;UBERON:0000307,4.52e-10,10;UBERON:0000091,4.52e-10,10;UBERON:0000087,4.52e-10,10;UBERON:0007010,4.52e-10,10;UBERON:0007806,4.52e-10,10;UBERON:0008780,4.52e-10,10;UBERON:0005728,4.52e-10,10;UBERON:0000478,3.54e-07,24;UBERON:0000178,7.05e-07,15;UBERON:0000179,7.05e-07,15;UBERON:0000463,7.05e-07,15 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.305653622991805,0.57470412614962,0.393553906568396,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0.800791974072025,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0,0,0,0,0,0,1.66943437013739,1.14398982156026,0.74291500265913,0.596287222100115,0,1.04142150482278,0,0,0,1.04497483268405,0.516833518338658,0.71153252537342,0.66944122552934,0,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.2933531432838,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0.715624433709956,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0.811641507850816,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.46612069646205,0.445773537109913,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0.503865495708552,0,0.246169610922139,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.455768223388005,0.23056390438806,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.176915129006678,0,1.48260564340311,1.11207545051853,2.08843899010911,0.202203398942031,0,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0.171986032471617,0.387025325156341,0.511625219603299,0.574808199372465,0,1.412098027064,0.225980740780532,0.137041924646751,0,0.189932387867636,0,0,0.213452994739353,0,0,0,2.4023299700675,0,0.248505071130865,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.630265458457789,0.247247575143499,0.13480708770837,0,0.76205998859206,0,0,0.160753148465019,0.275078873194468,0.83088067605837,0.2249738915515,0,0,0,0,0.104909176269996,0.528001682597033,0.179287339332845,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0.983617892129413,0.157054096250234,0,0.244052529803926,0.1251909307065,0.573409195690071,0.332787154610557,0.248385611765534,0,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0.521745061811734,0,0,0.813741466409323,0.545545977607678,0,0,0,0,0,0,0,0.192619830407303,0,0.521988583930423,0.226705925512272,0.463044948647668,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0.194860308839388,0,0,0.327609848846413,0,0.422624246717254,0.79994958341972,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0,0,0.342976018874837,0.203909198930495,0.1315455471256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| |||
|short_description=p11@CCDC50 | |||
}} |
Revision as of 23:19, 21 January 2014
Short description: | p11@CCDC50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CCDC50_5end |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | 413bp_to_ENST00000392456, NM_174908, NM_178335, uc003fsv.2, uc003fsw.2_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | Q8IVM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.68e-15 | 3 |
peptide hormone secreting cell | 6.26e-12 | 1 |
enteroendocrine cell | 6.26e-12 | 1 |
type D enteroendocrine cell | 6.26e-12 | 1 |
somatostatin secreting cell | 6.26e-12 | 1 |
pancreatic D cell | 6.26e-12 | 1 |
progenitor cell of endocrine pancreas | 6.26e-12 | 1 |
multinucleate cell | 7.76e-12 | 1 |
myotube | 7.76e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.52e-10 | 10 |
blastocyst | 4.52e-10 | 10 |
blastula | 4.52e-10 | 10 |
bilaminar disc | 4.52e-10 | 10 |
inner cell mass | 4.52e-10 | 10 |
cleaving embryo | 4.52e-10 | 10 |
connecting stalk | 4.52e-10 | 10 |
inner cell mass derived epiblast | 4.52e-10 | 10 |
extraembryonic mesoderm | 4.52e-10 | 10 |
extraembryonic structure | 3.54e-07 | 24 |
blood | 7.05e-07 | 15 |
haemolymphatic fluid | 7.05e-07 | 15 |
organism substance | 7.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.05e-12 | 1 |
somatostatinoma | 6.26e-12 | 1 |
chondrosarcoma | 8.64e-12 | 1 |
extraosseous chondrosarcoma | 8.64e-12 | 1 |
myxoid chondrosarcoma | 8.64e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 8.64e-12 | 1 |