FFCP PHASE1:Hg19::chr4:34041528..34041540,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENST00000505018,uc003gsn.2_5end | |||
|description=CAGE_peak_1_at_ENST00000505018_5end,CAGE_peak_1_at_uc003gsn.2_5end | |||
|id=chr4:34041528..34041540,- | |||
|ontology_enrichment_celltype=CL:0000313!6.97e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000313;4.07e-12;1!CL:0000054;5.57e-07;2!CL:0000137;5.57e-07;2!CL:0000092;5.57e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.45e-12,1;CL:0000054,5.41e-07,2;CL:0000137,5.41e-07,2;CL:0000092,5.41e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.00e-10;10!UBERON:0005564;2.00e-10;10 | |||
|ontology_enrichment_disease=DOID:1036!1.52e-20!8;DOID:162!2.05e-12!235;DOID:14566!4.68e-12!239;DOID:2531!4.06e-11!51;DOID:0060083!4.06e-11!51;DOID:1240!1.36e-09!39;DOID:8692!1.41e-09!31;DOID:0060085!3.32e-08!1;DOID:3165!3.32e-08!1;DOID:0060121!3.32e-08!1;DOID:2438!3.32e-08!1;DOID:4418!3.32e-08!1;DOID:2152!6.97e-08!1;DOID:4960!8.51e-08!1;DOID:0070004!8.51e-08!1;DOID:0050686!1.29e-07!137;DOID:0050687!3.74e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.88e-22;8!DOID:0060085;1.05e-12;1!DOID:3165;1.05e-12;1!DOID:0060121;1.05e-12;1!DOID:2438;1.05e-12;1!DOID:4418;1.05e-12;1!DOID:4960;4.07e-12;1!DOID:2152;4.07e-12;1!DOID:0070004;4.07e-12;1!DOID:8692;3.51e-09;31!DOID:201;2.29e-08;6!DOID:0060100;2.29e-08;6!DOID:2531;3.46e-07;51!DOID:0060083;3.46e-07;51!DOID:3493;5.11e-07;2!DOID:200;5.57e-07;2!DOID:4305;5.57e-07;2!DOID:4231;9.02e-07;2!DOID:1907;9.02e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.83e-22,8;DOID:0060085,9.92e-13,1;DOID:3165,9.92e-13,1;DOID:0060121,9.92e-13,1;DOID:2438,9.92e-13,1;DOID:4418,9.92e-13,1;DOID:2152,3.45e-12,1;DOID:4960,4.81e-12,1;DOID:0070004,4.81e-12,1;DOID:2531,5.23e-10,51;DOID:0060083,5.23e-10,51;DOID:8692,6.95e-09,31;DOID:201,2.34e-08,6;DOID:0060100,2.34e-08,6;DOID:162,3.24e-07,235;DOID:1240,4.92e-07,39;DOID:14566,5.06e-07,239;DOID:3493,5.11e-07,2;DOID:200,5.41e-07,2;DOID:4305,5.41e-07,2;DOID:4231,9.54e-07,2;DOID:1907,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007195!3.55e-08!1;UBERON:0004911!6.97e-08!1;UBERON:0000473!7.31e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.05e-12;1!UBERON:0004911;4.07e-12;1!UBERON:0002371;6.09e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.11e-12,1;UBERON:0004911,3.45e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34087408674291,0,0.811367035427949,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66821940867821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,5.18870019419516,2.54881294613061,4.86682602229944,0.37950746544837,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,6.95501140960464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.906574442192831,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11951578847488,0,4.19254738624465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20550485762571,0,2.02516545277025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61364054962816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90154234056247,7.95016892283468,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,18.9267174921997,16.2331640989218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,2.19758224832894,3.48353369203032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000505018,p1@uc003gsn.2 | |||
}} |
Revision as of 00:37, 22 January 2014
Short description: | p1@ENST00000505018, p1@uc003gsn.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000505018_5end, CAGE_peak_1_at_uc003gsn.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000505018, uc003gsn.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.45e-12 | 1 |
bone matrix secreting cell | 5.41e-07 | 2 |
osteocyte | 5.41e-07 | 2 |
osteoclast | 5.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.11e-12 | 1 |
epithelium of female gonad | 3.45e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.83e-22 | 8 |
organ system benign neoplasm | 9.92e-13 | 1 |
skin benign neoplasm | 9.92e-13 | 1 |
integumentary system benign neoplasm | 9.92e-13 | 1 |
dermis tumor | 9.92e-13 | 1 |
cutaneous fibrous histiocytoma | 9.92e-13 | 1 |
ovary epithelial cancer | 3.45e-12 | 1 |
bone marrow cancer | 4.81e-12 | 1 |
myeloma | 4.81e-12 | 1 |
hematologic cancer | 5.23e-10 | 51 |
immune system cancer | 5.23e-10 | 51 |
myeloid leukemia | 6.95e-09 | 31 |
connective tissue cancer | 2.34e-08 | 6 |
musculoskeletal system cancer | 2.34e-08 | 6 |
cancer | 3.24e-07 | 235 |
leukemia | 4.92e-07 | 39 |
disease of cellular proliferation | 5.06e-07 | 239 |
signet ring cell adenocarcinoma | 5.11e-07 | 2 |
giant cell tumor | 5.41e-07 | 2 |
bone giant cell tumor | 5.41e-07 | 2 |
histiocytoma | 9.54e-07 | 2 |
malignant fibroxanthoma | 9.54e-07 | 2 |