FFCP PHASE1:Hg19::chr4:54931911..54931926,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:54931911..54931926,- | |||
|id=chr4:54931911..54931926,- | |||
|ontology_enrichment_celltype=CL:0000359!4.49e-24!32;CL:0000192!3.27e-17!42;CL:0000514!3.27e-17!42;CL:0000055!2.01e-16!180;CL:0000187!2.93e-12!54;CL:0000680!3.03e-12!57;CL:0000056!3.03e-12!57;CL:0000355!3.03e-12!57;CL:0000183!1.87e-10!59;CL:0000057!3.81e-10!75;CL:0000393!3.91e-10!60;CL:0000211!3.91e-10!60;CL:0000222!7.05e-09!119;CL:0002539!1.36e-08!10;CL:0000136!4.38e-08!15;CL:0002595!4.62e-08!5;CL:0000723!2.35e-07!436;CL:0000048!3.69e-07!430;CL:0002371!8.85e-07!591;CL:0000034!9.37e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.21e-48;32!CL:0000192;2.77e-29;43!CL:0002595;3.33e-21;5!CL:0002539;1.81e-19;10!CL:0000187;1.55e-14;55!CL:0000393;3.13e-12;61!CL:0000211;3.13e-12;61!CL:1000306;7.41e-10;4!CL:0002547;7.41e-10;4!CL:0002589;1.35e-09;2!CL:0002593;3.50e-09;2!CL:0002596;4.46e-09;2!CL:0002545;1.47e-08;2!CL:1000413;6.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.11e-51,32;CL:0000192,4.40e-37,43;CL:0000514,4.40e-37,43;CL:0000680,8.97e-29,58;CL:0000056,8.97e-29,58;CL:0000355,8.97e-29,58;CL:0000187,7.96e-28,55;CL:0000393,1.45e-24,61;CL:0000211,1.45e-24,61;CL:0002595,3.87e-21,5;CL:0002539,1.84e-19,10;CL:0000222,2.53e-19,121;CL:1000306,8.25e-10,4;CL:0002547,8.25e-10,4;CL:0002589,1.20e-09,2;CL:0002596,4.12e-09,2;CL:0002593,4.12e-09,2;CL:0002545,1.04e-08,2;CL:0002321,2.61e-07,250;CL:1000413,6.38e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;2.77e-29;43!CL:0000355;1.62e-15;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.26e-34!42;UBERON:0003509!1.26e-34!42;UBERON:0004572!1.26e-34!42;UBERON:0001981!2.14e-29!60;UBERON:0007500!2.14e-29!60;UBERON:0004537!2.14e-29!60;UBERON:0006965!2.14e-29!60;UBERON:0004573!1.91e-28!33;UBERON:0004571!1.91e-28!33;UBERON:0004872!2.01e-26!84;UBERON:0000055!6.64e-25!69;UBERON:0002049!6.29e-22!79;UBERON:0007798!6.29e-22!79;UBERON:0004535!2.32e-16!110;UBERON:0001009!1.70e-15!113;UBERON:0000947!4.79e-14!21;UBERON:0010191!4.79e-14!21;UBERON:0003914!2.98e-13!118;UBERON:0001134!7.92e-11!61;UBERON:0002036!7.92e-11!61;UBERON:0003082!7.92e-11!61;UBERON:0002385!3.40e-10!63;UBERON:0001015!3.40e-10!63;UBERON:0000383!3.40e-10!63;UBERON:0004290!9.22e-10!70;UBERON:0000914!2.21e-09!83;UBERON:0002329!2.21e-09!83;UBERON:0003077!2.21e-09!83;UBERON:0003059!2.21e-09!83;UBERON:0007282!2.21e-09!83;UBERON:0009618!2.21e-09!83;UBERON:0007285!2.21e-09!83;UBERON:0004237!1.36e-08!10;UBERON:0004695!1.36e-08!10;UBERON:0002111!1.36e-08!10;UBERON:0004178!1.36e-08!10;UBERON:0000486!1.74e-08!82;UBERON:0003834!4.62e-08!5;UBERON:0001533!4.62e-08!5;UBERON:0000490!7.53e-08!138;UBERON:0003498!6.52e-07!5;UBERON:0005985!6.52e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.07e-57;33!UBERON:0004571;4.07e-57;33!UBERON:0001637;3.05e-47;42!UBERON:0003509;3.05e-47;42!UBERON:0004572;3.05e-47;42!UBERON:0000947;1.06e-29;21!UBERON:0010191;1.06e-29;21!UBERON:0007500;3.60e-27;56!UBERON:0001981;3.60e-27;56!UBERON:0004537;3.60e-27;56!UBERON:0003834;3.33e-21;5!UBERON:0001533;3.33e-21;5!UBERON:0000055;1.77e-20;65!UBERON:0004237;1.81e-19;10!UBERON:0004695;1.81e-19;10!UBERON:0002111;1.81e-19;10!UBERON:0004178;1.81e-19;10!UBERON:0002049;3.60e-16;75!UBERON:0007798;3.60e-16;75!UBERON:0003513;4.65e-15;7!UBERON:0003914;2.73e-14;74!UBERON:0001135;1.23e-12;15!UBERON:0004797;7.41e-10;4!UBERON:0000415;7.41e-10;4!UBERON:0007240;7.41e-10;4!UBERON:0005742;7.41e-10;4!UBERON:0005734;7.41e-10;4!UBERON:0004664;7.41e-10;4!UBERON:0004663;7.41e-10;4!UBERON:0001529;1.35e-09;2!UBERON:0007204;1.35e-09;2!UBERON:0000025;1.68e-09;93!UBERON:0002456;3.50e-09;2!UBERON:0005396;4.46e-09;2!UBERON:0005800;1.47e-08;2!UBERON:0001515;1.47e-08;2!UBERON:0004535;9.33e-08;109!UBERON:0001009;2.47e-07;112!UBERON:0002385;5.95e-07;31!UBERON:0001015;5.95e-07;31!UBERON:0000383;5.95e-07;31!UBERON:0003915;6.58e-07;9!UBERON:0004700;6.58e-07;9!UBERON:0001917;6.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.23e-69,42;UBERON:0003509,3.23e-69,42;UBERON:0004572,3.23e-69,42;UBERON:0004573,3.45e-66,33;UBERON:0004571,3.45e-66,33;UBERON:0007500,6.64e-51,59;UBERON:0001981,6.64e-51,59;UBERON:0004537,6.64e-51,59;UBERON:0006965,6.64e-51,59;UBERON:0000055,3.27e-43,68;UBERON:0004872,8.66e-37,83;UBERON:0002049,9.53e-37,78;UBERON:0007798,9.53e-37,78;UBERON:0000947,9.34e-30,21;UBERON:0010191,9.34e-30,21;UBERON:0001134,1.47e-26,62;UBERON:0002036,1.47e-26,62;UBERON:0003082,1.47e-26,62;UBERON:0004535,2.96e-26,109;UBERON:0003914,7.39e-26,117;UBERON:0002385,1.48e-25,64;UBERON:0001015,1.48e-25,64;UBERON:0000383,1.48e-25,64;UBERON:0001009,2.35e-25,112;UBERON:0002329,1.72e-22,71;UBERON:0003059,1.72e-22,71;UBERON:0007282,1.72e-22,71;UBERON:0004290,1.72e-22,71;UBERON:0009618,1.72e-22,71;UBERON:0003077,4.22e-22,72;UBERON:0007285,4.22e-22,72;UBERON:0007524,1.01e-21,73;UBERON:0003834,3.87e-21,5;UBERON:0001533,3.87e-21,5;UBERON:0000486,2.10e-20,83;UBERON:0007503,5.59e-20,78;UBERON:0004237,1.84e-19,10;UBERON:0004695,1.84e-19,10;UBERON:0002111,1.84e-19,10;UBERON:0004178,1.84e-19,10;UBERON:0003513,5.16e-15,7;UBERON:0003081,7.65e-14,203;UBERON:0000490,2.48e-13,148;UBERON:0000025,9.28e-13,192;UBERON:0001135,1.24e-12,15;UBERON:0005256,4.49e-12,122;UBERON:0002204,4.17e-10,167;UBERON:0000415,8.25e-10,4;UBERON:0007240,8.25e-10,4;UBERON:0005742,8.25e-10,4;UBERON:0005734,8.25e-10,4;UBERON:0004664,8.25e-10,4;UBERON:0004663,8.25e-10,4;UBERON:0003104,8.49e-10,160;UBERON:0009142,8.49e-10,160;UBERON:0001529,1.20e-09,2;UBERON:0007204,1.20e-09,2;UBERON:0004797,1.90e-09,7;UBERON:0002456,4.12e-09,2;UBERON:0005396,4.12e-09,2;UBERON:0004111,8.44e-09,240;UBERON:0005800,1.04e-08,2;UBERON:0001515,1.04e-08,2;UBERON:0002100,2.64e-08,199;UBERON:0000926,2.80e-08,315;UBERON:0004120,2.80e-08,315;UBERON:0006603,2.80e-08,315;UBERON:0003498,6.75e-08,5;UBERON:0005985,6.75e-08,5;UBERON:0003915,6.38e-07,9;UBERON:0004700,6.38e-07,9;UBERON:0001917,6.38e-07,9 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.0843174571537,1.50401373190767,0.724232594804119,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.79504962946682,0,1.38856200643038,0,0,1.10047216776027,0.208994966536811,0.516833518338658,0,0,0.805658634218294,0,0,1.47065232138347,1.62028389576352,0.714397826272638,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,2.27934920996244,3.04541115870403,3.44203944898576,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0.408308342509787,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0,0.250237039743928,0.831192346452549,0,0.30648779579902,0,0.226864366320042,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.389748020644795,0.252433774244115,0,0.161646056818812,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0,0.36669142910475,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,1.30303176000821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.892144943985809,0,2.10854546986884,0.300946099727719,0,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.767309866440312,0,0.256278298511402,0,0.64341568457443,1.48418066444991,0,0.177561725313127,0.492762936082855,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,1.39453664789186,9.4443704049192,6.970372701606,3.08033580176089,4.7907542728532,8.69932992075073,11.8607500226509,3.86437194203376,0,0.316379424718726,0,0,0,2.54562598340749,2.35484592059769,0,0,0,4.85237955775958,6.34041284692033,0.842516912477962,0,1.21856744815642,9.50851320810799,0.136499911407986,0,1.13008116620243,5.51365343546124,7.96126770289464,18.414937180658,0,0,1.21746226177622,0.30982349809975,0.281695602532241,0,0,1.78335525740625,0,2.53329162357197,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,0.921482106297696,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,3.73247505194169,0,0,0,0.197286811273867,0,6.66821940867821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,4.46601623624687,0.549585560411174,5.33034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0,0,0,0,0,0,1.80149941771202,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27134268827375,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,1.0027595760908,0.919036730290385,3.27872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.568209015825267,1.50940741051545,0,0.228840068396924,0.302461847526478,0.466311601748341,2.51353754982378,0.159296767163702,0,0,0,0.265841714557995,0.521745061811734,0,0,0.406870733204662,0,0,0,0.398095888698616,0.800055529326307,0.343395705182793,0.673498977531838,1.26184898228651,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,3.40509572140102,0.184105950251841,0.279759015438889,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.80682027481408,0,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,1.0195626881269,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0.924351257262837,1.73050624849516,0,0,0,0,0,0,0,0.757786982182394,0.803892390468535,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:54931911..54931926,- | |||
}} |
Revision as of 01:04, 22 January 2014
Short description: | p@chr4:54931911..54931926, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:54931911..54931926, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.11e-51 | 32 |
smooth muscle cell | 4.40e-37 | 43 |
smooth muscle myoblast | 4.40e-37 | 43 |
muscle precursor cell | 8.97e-29 | 58 |
myoblast | 8.97e-29 | 58 |
multi-potent skeletal muscle stem cell | 8.97e-29 | 58 |
muscle cell | 7.96e-28 | 55 |
electrically responsive cell | 1.45e-24 | 61 |
electrically active cell | 1.45e-24 | 61 |
smooth muscle cell of the subclavian artery | 3.87e-21 | 5 |
aortic smooth muscle cell | 1.84e-19 | 10 |
mesodermal cell | 2.53e-19 | 121 |
fibroblast of tunica adventitia of artery | 8.25e-10 | 4 |
fibroblast of the aortic adventitia | 8.25e-10 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 1.20e-09 | 2 |
smooth muscle cell of the carotid artery | 4.12e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 4.12e-09 | 2 |
thoracic aorta endothelial cell | 1.04e-08 | 2 |
embryonic cell | 2.61e-07 | 250 |
endothelial cell of artery | 6.38e-07 | 9 |