FFCP PHASE1:Hg19::chr4:75250303..75250307,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr4:75250303..75250307,+ | |||
|id=chr4:75250303..75250307,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.12e-46!42;CL:0000860!7.50e-43!45;CL:0002009!7.32e-32!65;CL:0000557!3.08e-30!71;CL:0002194!4.49e-29!63;CL:0000576!4.49e-29!63;CL:0000040!4.49e-29!63;CL:0000559!4.49e-29!63;CL:0000766!1.51e-27!76;CL:0000839!3.60e-25!70;CL:0000763!4.42e-20!112;CL:0000049!4.42e-20!112;CL:0000738!8.24e-17!140;CL:0002087!6.27e-16!119;CL:0000037!5.62e-14!172;CL:0000566!5.62e-14!172;CL:0002031!8.82e-14!124;CL:0000988!2.65e-13!182;CL:0002032!1.24e-11!165;CL:0000837!1.24e-11!165;CL:0000842!3.64e-07!3;CL:0000767!4.13e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.76e-68;33!CL:0002057;2.76e-68;33!CL:0000473;2.10e-45;39!CL:0000234;2.10e-45;39!CL:0000576;5.83e-42;48!CL:0000766;2.03e-29;69!CL:0000763;3.33e-14;100!CL:0002087;7.36e-13;104!CL:0002393;5.30e-10;6!CL:0002397;5.30e-10;6!CL:0000738;2.57e-09;136!CL:0000767;1.19e-08;3!CL:0002032;4.20e-07;1!CL:0000557;4.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.61e-77,42;CL:0002057,1.61e-77,42;CL:0000473,3.16e-67,48;CL:0000234,3.16e-67,48;CL:0002194,1.72e-57,59;CL:0000576,1.72e-57,59;CL:0000040,1.72e-57,59;CL:0000559,1.72e-57,59;CL:0002009,1.79e-55,61;CL:0000557,2.20e-54,67;CL:0000766,2.25e-54,72;CL:0000839,5.82e-51,66;CL:0000763,1.62e-37,108;CL:0000049,1.62e-37,108;CL:0002087,2.82e-32,115;CL:0000738,4.63e-31,136;CL:0002031,2.83e-28,120;CL:0000037,4.33e-26,168;CL:0002032,2.08e-25,161;CL:0000837,2.08e-25,161;CL:0000988,1.74e-24,177;CL:0000134,2.13e-09,354;CL:0002320,4.20e-09,361;CL:0000767,1.89e-08,3;CL:0000219,4.62e-08,386;CL:0000048,1.49e-07,427;CL:0000723,2.30e-07,433;CL:0000034,4.03e-07,441;CL:0002393,8.39e-07,9;CL:0002397,8.39e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-56;42!CL:0000049;1.43e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.20e-07;1!DOID:3165;4.20e-07;1!DOID:0060121;4.20e-07;1!DOID:2438;4.20e-07;1!DOID:4418;4.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.85e-07,1;DOID:3165,3.85e-07,1;DOID:0060121,3.85e-07,1;DOID:2438,3.85e-07,1;DOID:4418,3.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.21e-27!80;UBERON:0001474!1.52e-24!86;UBERON:0002390!1.70e-24!102;UBERON:0003061!1.70e-24!102;UBERON:0002193!3.15e-21!112;UBERON:0004765!2.84e-19!101;UBERON:0001434!2.84e-19!101;UBERON:0002405!9.40e-18!115;UBERON:0002204!2.85e-08!167;UBERON:0003081!6.51e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;2.22e-07;1!UBERON:0005056;2.22e-07;1!UBERON:0004176;2.22e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.99e-47,76;UBERON:0001474,1.25e-43,82;UBERON:0004765,2.44e-39,90;UBERON:0002390,9.32e-39,98;UBERON:0003061,9.32e-39,98;UBERON:0002405,6.43e-38,93;UBERON:0001434,6.24e-35,100;UBERON:0002193,1.03e-34,108;UBERON:0002204,6.51e-19,167;UBERON:0003081,4.77e-16,203;UBERON:0000926,2.30e-09,315;UBERON:0004120,2.30e-09,315;UBERON:0006603,2.30e-09,315;UBERON:0002384,1.06e-08,371;UBERON:0000997,2.23e-07,1;UBERON:0005056,2.23e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,1.18009283054671,1.15148819429164,0.464448369948228,0,0,0,0,0,0.293600439334847,12.7418943962332,9.02450013615638,4.55722828503289,0,0,0,0.436194716338694,0,0,3.48643555358527,1.6446715520873,1.23882548358041,3.45230870786581,1.5369642391746,1.41889337933151,3.10271112662957,0.645484683583826,1.35426486594342,1.12945403725563,1.36453075028923,0.674170453335254,5.20342617030534,1.60464513538047,8.31138263538754,0.329851300186716,0,0,10.447532590629,5.6738522469114,6.85104473895132,1.50749199154046,1.5644487552606,0.434377689410233,3.63239701580021,1.84138817993782,5.06339819905415,0,0.212604299965044,0,0.44931452458598,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,1.01701460117107,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,1.94224303627274,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05784034570193,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,1.39100228192093,0,0,0,0,0,0,0.114536596165916,0,0.432164393964449,0,0.707082103850386,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0.342976018874837,0,0,0.709163045303809,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p@chr4:75250303..75250307,+ | |||
}} |
Revision as of 01:38, 22 January 2014
Short description: | p@chr4:75250303..75250307, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:75250303..75250307, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.99e-47 | 76 |
bone element | 1.25e-43 | 82 |
skeletal element | 2.44e-39 | 90 |
hematopoietic system | 9.32e-39 | 98 |
blood island | 9.32e-39 | 98 |
immune system | 6.43e-38 | 93 |
skeletal system | 6.24e-35 | 100 |
hemolymphoid system | 1.03e-34 | 108 |
musculoskeletal system | 6.51e-19 | 167 |
lateral plate mesoderm | 4.77e-16 | 203 |
mesoderm | 2.30e-09 | 315 |
mesoderm-derived structure | 2.30e-09 | 315 |
presumptive mesoderm | 2.30e-09 | 315 |
connective tissue | 1.06e-08 | 371 |
mammalian vulva | 2.23e-07 | 1 |
external female genitalia | 2.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.85e-07 | 1 |
skin benign neoplasm | 3.85e-07 | 1 |
integumentary system benign neoplasm | 3.85e-07 | 1 |
dermis tumor | 3.85e-07 | 1 |
cutaneous fibrous histiocytoma | 3.85e-07 | 1 |