FFCP PHASE1:Hg19::chr4:78078343..78078406,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=901 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1593 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N5D4,Q16589,Q6FGC6 | |||
|association_with_transcript=0bp_to_ENST00000354403,ENST00000497512,ENST00000502280,NM_004354,uc003hkn.3,uc003hkq.3_5end | |||
|description=CAGE_peak_1_at_CCNG2_5end | |||
|id=chr4:78078343..78078406,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.79e-16!115;UBERON:0001893!5.28e-10!34;UBERON:0003080!6.30e-10!42;UBERON:0001869!6.57e-10!32;UBERON:0002791!1.04e-09!33;UBERON:0002780!1.59e-09!41;UBERON:0001890!1.59e-09!41;UBERON:0006240!1.59e-09!41;UBERON:0001049!2.27e-09!57;UBERON:0005068!2.27e-09!57;UBERON:0006241!2.27e-09!57;UBERON:0007135!2.27e-09!57;UBERON:0002616!7.77e-09!59;UBERON:0002020!9.37e-09!34;UBERON:0003528!9.37e-09!34;UBERON:0002619!9.69e-09!22;UBERON:0001950!1.56e-08!20;UBERON:0000956!6.27e-08!25;UBERON:0000203!6.27e-08!25;UBERON:0000153!9.97e-08!129;UBERON:0007811!9.97e-08!129;UBERON:0001017!1.36e-07!82;UBERON:0000955!1.57e-07!69;UBERON:0006238!1.57e-07!69;UBERON:0005743!2.79e-07!86;UBERON:0004121!5.98e-07!169;UBERON:0000033!6.84e-07!123;UBERON:0003056!7.10e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.26e-09;32!UBERON:0002791;7.96e-09;32!UBERON:0001893;1.01e-08;34!UBERON:0002619;1.26e-08;22!UBERON:0001950;2.34e-08;20!UBERON:0003528;6.27e-08;34!UBERON:0002020;6.27e-08;34!UBERON:0000956;6.43e-08;25!UBERON:0000203;6.43e-08;25!UBERON:0002780;1.41e-07;41!UBERON:0001890;1.41e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-15,114;UBERON:0001893,5.27e-10,34;UBERON:0001869,6.57e-10,32;UBERON:0002791,1.48e-09,32;UBERON:0002780,1.59e-09,41;UBERON:0001890,1.59e-09,41;UBERON:0003080,1.59e-09,41;UBERON:0006240,1.59e-09,41;UBERON:0001049,5.27e-09,56;UBERON:0005068,5.27e-09,56;UBERON:0006241,5.27e-09,56;UBERON:0007135,5.27e-09,56;UBERON:0000073,5.60e-09,53;UBERON:0002616,5.60e-09,53;UBERON:0003528,9.37e-09,34;UBERON:0002020,9.37e-09,34;UBERON:0002619,9.69e-09,22;UBERON:0001950,1.56e-08,20;UBERON:0000956,6.26e-08,25;UBERON:0000203,6.26e-08,25;UBERON:0001017,2.72e-07,81;UBERON:0000955,3.24e-07,68;UBERON:0006238,3.24e-07,68;UBERON:0010371,4.24e-07,104;UBERON:0004121,4.88e-07,171;UBERON:0000924,4.88e-07,171;UBERON:0006601,4.88e-07,171 | |||
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| |||
|short_description=p1@CCNG2 | |||
}} |
Revision as of 01:46, 22 January 2014
Short description: | p1@CCNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354403, ENST00000497512, ENST00000502280, NM_004354, uc003hkn.3, uc003hkq.3_5end |
EntrezGene: | CCNG2 |
HGNC: | 1593 |
UniProt: | Q8N5D4Q16589Q6FGC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.17e-15 | 114 |
telencephalon | 5.27e-10 | 34 |
cerebral hemisphere | 6.57e-10 | 32 |
regional part of telencephalon | 1.48e-09 | 32 |
regional part of forebrain | 1.59e-09 | 41 |
forebrain | 1.59e-09 | 41 |
anterior neural tube | 1.59e-09 | 41 |
future forebrain | 1.59e-09 | 41 |
neural tube | 5.27e-09 | 56 |
neural rod | 5.27e-09 | 56 |
future spinal cord | 5.27e-09 | 56 |
neural keel | 5.27e-09 | 56 |
regional part of nervous system | 5.60e-09 | 53 |
regional part of brain | 5.60e-09 | 53 |
brain grey matter | 9.37e-09 | 34 |
gray matter | 9.37e-09 | 34 |
regional part of cerebral cortex | 9.69e-09 | 22 |
neocortex | 1.56e-08 | 20 |
cerebral cortex | 6.26e-08 | 25 |
pallium | 6.26e-08 | 25 |
central nervous system | 2.72e-07 | 81 |
brain | 3.24e-07 | 68 |
future brain | 3.24e-07 | 68 |
ecto-epithelium | 4.24e-07 | 104 |
ectoderm-derived structure | 4.88e-07 | 171 |
ectoderm | 4.88e-07 | 171 |
presumptive ectoderm | 4.88e-07 | 171 |