FFCP PHASE1:Hg19::chr4:156536620..156536641,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_at_chr4:156536620..156536641,+ | |||
|id=chr4:156536620..156536641,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.70e-27;3!CL:0002032;5.71e-21;1!CL:0000557;5.71e-21;1!CL:0000451;3.20e-08;10!CL:0002144;7.02e-08;3!CL:0000307;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.39e-27,3;CL:0000451,3.03e-08,10;CL:0002144,7.76e-08,3;CL:0000068,8.29e-08,3;CL:0000069,8.29e-08,3;CL:0000307,8.29e-08,3;CL:0000377,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.30e-21;1!UBERON:0003056;5.18e-08;3!CL:0000377;7.02e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005383!4.26e-09!3;UBERON:0005382!4.26e-09!3;UBERON:0000369!6.46e-07!4;UBERON:0002435!6.46e-07!4;UBERON:0000204!6.46e-07!4;UBERON:0010082!6.46e-07!4;UBERON:0005162!8.96e-07!2;UBERON:0000122!8.96e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.30e-21;1!UBERON:0001785;2.30e-21;1!UBERON:0002464;2.30e-21;1!UBERON:0004904;2.30e-21;1!UBERON:0001021;2.30e-21;1!UBERON:0003714;2.23e-11;2!UBERON:0005162;2.23e-11;2!UBERON:0000122;2.23e-11;2!UBERON:0010523;7.02e-08;3!UBERON:0001915;7.02e-08;3!UBERON:0001982;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.88e-21,1;UBERON:0001785,1.88e-21,1;UBERON:0002464,1.88e-21,1;UBERON:0004904,1.88e-21,1;UBERON:0001021,1.88e-21,1;UBERON:0003902,1.88e-21,1;UBERON:0005425,1.88e-21,1;UBERON:0003714,2.02e-11,2;UBERON:0005162,2.02e-11,2;UBERON:0000122,2.02e-11,2;UBERON:0010523,7.76e-08,3;UBERON:0001915,7.76e-08,3;UBERON:0001982,7.76e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.246301768349837,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0.587200878669695,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43094374583205,0,45.3178151622069,0,0,0,0,0,0,0,0,0,0,1.20848795132744,0,0,0.735326160691737,0,0,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0,2.50634477090067,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.628817220398664,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0.345701962667338,0,0.135939465953663,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |||
|short_description=p@chr4:156536620..156536641,+ | |||
}} |
Revision as of 03:38, 22 January 2014
Short description: | p@chr4:156536620..156536641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:156536620..156536641, + |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.39e-27 | 3 |
dendritic cell | 3.03e-08 | 10 |
capillary endothelial cell | 7.76e-08 | 3 |
duct epithelial cell | 8.29e-08 | 3 |
branched duct epithelial cell | 8.29e-08 | 3 |
tracheal epithelial cell | 8.29e-08 | 3 |
tracheoblast | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.88e-21 | 1 |
cranial nerve | 1.88e-21 | 1 |
nerve trunk | 1.88e-21 | 1 |
nerve connecting eye with brain | 1.88e-21 | 1 |
nerve | 1.88e-21 | 1 |
retinal neural layer | 1.88e-21 | 1 |
presumptive neural retina | 1.88e-21 | 1 |
neural tissue | 2.02e-11 | 2 |
multi cell component structure | 2.02e-11 | 2 |
neuron projection bundle | 2.02e-11 | 2 |
microcirculatory vessel | 7.76e-08 | 3 |
endothelium of capillary | 7.76e-08 | 3 |
capillary | 7.76e-08 | 3 |