FFCP PHASE1:Hg19::chr5:52083886..52083895,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53918 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8829 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=99bp_to_ENST00000506949_5end | |||
|coexpression_cluster_id=C2823 | |||
|description=CAGE_peak_10_at_PELO_5end | |||
|id=chr5:52083886..52083895,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002504;4.37e-14;3!CL:1000279;4.37e-14;3!CL:1000280;4.37e-14;3!CL:0002195;2.41e-10;2!CL:0002571;2.41e-10;2!CL:0000134;8.50e-09;55!CL:0000048;1.01e-07;58!CL:0002541;6.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,3.50e-14,3;CL:1000279,3.50e-14,3;CL:1000280,3.50e-14,3;CL:0002195,3.21e-10,2;CL:0002571,3.21e-10,2;CL:0002541,6.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.94e-09;29 | |||
|ontology_enrichment_disease=DOID:2394!4.31e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.45e-12;14!DOID:193;3.18e-09;29!DOID:120;1.13e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.42e-12,14;DOID:193,3.82e-09,29;DOID:120,1.31e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001007!4.88e-13!155;UBERON:0001555!4.88e-13!155;UBERON:0007026!4.88e-13!155;UBERON:0004921!9.17e-13!129;UBERON:0004185!9.17e-13!129;UBERON:0004119!2.55e-12!169;UBERON:0000925!2.55e-12!169;UBERON:0006595!2.55e-12!169;UBERON:0001737!2.20e-10!9;UBERON:0009856!7.83e-10!26;UBERON:0007499!2.41e-09!25;UBERON:0000077!3.94e-09!130;UBERON:0009854!6.39e-09!23;UBERON:0000468!1.01e-08!659;UBERON:0008835!1.96e-08!22;UBERON:0003894!1.96e-08!22;UBERON:0009497!5.16e-08!25;UBERON:0000015!5.16e-08!25;UBERON:0002423!5.16e-08!25;UBERON:0006235!5.16e-08!25;UBERON:0004161!5.16e-08!25;UBERON:0003929!1.26e-07!54;UBERON:0000481!1.39e-07!347;UBERON:0001041!2.76e-07!98;UBERON:0002107!3.02e-07!19;UBERON:0006925!3.02e-07!19;UBERON:0008836!3.02e-07!19;UBERON:0005911!5.96e-07!82;UBERON:0003104!6.64e-07!238;UBERON:0009142!6.64e-07!238;UBERON:0000062!7.89e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.89e-18;9!UBERON:0001557;2.89e-18;9!UBERON:0000160;1.60e-11;17!UBERON:0002118;5.51e-09;5!UBERON:0000992;6.31e-09;13!UBERON:0005409;8.14e-09;22!UBERON:0002107;3.33e-08;19!UBERON:0006925;3.33e-08;19!UBERON:0001155;3.73e-08;9!UBERON:0005631;1.73e-07;10!UBERON:0000158;1.73e-07;10!UBERON:0001280;3.07e-07;3!UBERON:0004647;3.07e-07;3!UBERON:0002106;6.50e-07;3!UBERON:0003124;6.50e-07;3!UBERON:0000920;6.50e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.03e-18,9;UBERON:0004921,4.16e-15,118;UBERON:0005409,1.38e-12,25;UBERON:0000160,1.32e-11,17;UBERON:0001007,2.40e-11,145;UBERON:0001555,2.40e-11,145;UBERON:0007026,2.40e-11,145;UBERON:0001041,5.45e-10,87;UBERON:0004119,8.22e-10,160;UBERON:0000925,8.22e-10,160;UBERON:0006595,8.22e-10,160;UBERON:0002118,4.82e-09,5;UBERON:0000992,6.23e-09,13;UBERON:0001557,2.15e-08,19;UBERON:0001155,2.74e-08,9;UBERON:0007499,3.34e-08,25;UBERON:0002107,3.89e-08,19;UBERON:0006925,3.89e-08,19;UBERON:0008836,3.89e-08,19;UBERON:0001048,5.80e-08,160;UBERON:0009856,7.51e-08,26;UBERON:0001280,2.60e-07,3;UBERON:0004647,2.60e-07,3;UBERON:0005171,2.60e-07,3;UBERON:0008835,6.07e-07,22;UBERON:0003894,6.07e-07,22;UBERON:0000920,6.93e-07,3;UBERON:0000059,8.62e-07,11;UBERON:0002106,9.07e-07,3;UBERON:0004854,9.07e-07,3;UBERON:0009034,9.07e-07,3;UBERON:0002095,9.07e-07,3;UBERON:0004782,9.07e-07,3;UBERON:0003281,9.07e-07,3;UBERON:0009664,9.07e-07,3;UBERON:0002296,9.07e-07,3;UBERON:0005602,9.07e-07,3;UBERON:0001179,9.07e-07,3;UBERON:0006293,9.07e-07,3;UBERON:0008947,9.52e-07,38;UBERON:0003258,9.52e-07,38 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.572471974262113,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0,1.97328599257748,0.640672166455702,0,0,0,0.772921620136887,1.48893485065272,0,0.292311015483596,0,0.0920498986422993,0,2.13005755509969,0.705264687593482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,2.19160097101532,0.964044119533928,1.8749975364507,1.30727666455444,0.949082476444386,1.34831308160164,2.35465758150415,4.61696588335668,1.4763109092493,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0,0.614942192715568,0.514703430895577,0,0,0,0,0,0,0,0,0.587043471179108,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,0.845302752556,2.6593811658487,1.04007436911366,0,0,0,2.57360388584666,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0,0.315404830067869,0,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0.37064843820784,0.429374660225974,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,1.97859703341646,1.09814811894422,1.29593642580255,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0.405820753925408,0,0,0.286822704408103,0.491245205065606,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,8.52408440419239,0,0,0,0,0,0.333926115068718,0,0,0.597743964753209,0.276283915531148,1.0077309914171,0,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,3.98797195464504,0.23056390438806,0.179515288819544,0,0.31900115973192,1.55715908783166,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.796118080530053,1.83309043480088,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0.661983911750998,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0,0.146178634172371,0.246346371159628,0.290967049465258,0,0.451961481561065,0.137041924646751,0,0,0,0,0.85381197895741,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0,0,0,2.14882720709979,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0.470284307407084,0,0,0.551482276150566,0.659326867049332,0.808842526250219,1.08270229666224,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.786818822024972,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0.906496732161005,0.732761168390412,0,0.129282956361551,0,0,0,0.533937062838473,1.57204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0.314108192500469,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,2.23015474029183,0.449803112163605,2.01841843939137,0,0.265841714557995,3.1304703708704,0.150257608997218,0.380805212168795,1.22061219961398,1.63663793282303,0.644463342254931,0.464033759878494,9.55430132876678,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0.106691729694141,0,0,0,0,1.24415452006595,0.127894371303652,0.107824811396682,0,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0.705351887381368,5.8186640697108,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,1.3807198521202,0,0,0,0,0,0.49131575253029,0.147856086217045,0.0675375846183947,0,0.413373593002368,0,0,0,0.992422356778588,0,0.127762427639595,0,0.336283722218824,0,0,0.620916591138472,0,0.171488009437418,0,0,0,0.444925607568277,0.549451649953598,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.430227358820278,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0.121917924982269,0,0.102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| |||
|short_description=p10@PELO | |||
}} |
Revision as of 05:21, 22 January 2014
Short description: | p10@PELO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PELO_5end |
Coexpression cluster: | C2823_mesenchymal_alveolar_spleen_Smooth_normal_mesodermal_Mesenchymal |
Association with transcript: | 99bp_to_ENST00000506949_5end |
EntrezGene: | PELO |
HGNC: | 8829 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 3.50e-14 | 3 |
smooth muscle cell of large intestine | 3.50e-14 | 3 |
smooth muscle cell of colon | 3.50e-14 | 3 |
hepatic stem cell | 3.21e-10 | 2 |
hepatic mesenchymal stem cell | 3.21e-10 | 2 |
chorionic membrane mesenchymal stem cell | 6.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.42e-12 | 14 |
reproductive organ cancer | 3.82e-09 | 29 |
female reproductive organ cancer | 1.31e-07 | 27 |