FFCP PHASE1:Hg19::chr5:54206351..54206382,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:54206351..54206382,- | |||
|id=chr5:54206351..54206382,- | |||
|ontology_enrichment_celltype=CL:0002139!2.58e-14!24;CL:0000115!6.87e-14!35;CL:0000222!8.53e-12!119;CL:0002078!1.37e-11!44;CL:0000071!1.39e-11!18;CL:0002546!1.39e-11!18;CL:0002543!7.60e-10!6;CL:0000213!6.23e-08!57;CL:0000215!6.23e-08!57;CL:0002618!7.89e-08!3;CL:0002552!2.23e-07!5;CL:0002504!6.55e-07!3;CL:1000279!6.55e-07!3;CL:1000280!6.55e-07!3;CL:0000192!6.70e-07!42;CL:0000514!6.70e-07!42;CL:0002544!8.34e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;5.26e-19;6!CL:0002139;3.35e-18;24!CL:0000115;3.26e-16;36!CL:0002078;7.89e-12;45!CL:0002188;5.43e-11;5!CL:0000213;1.80e-10;58!CL:0000215;1.80e-10;58!CL:1000746;4.19e-08;7!CL:1000612;4.19e-08;7!CL:0002545;1.87e-07;2!CL:0000071;8.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.51e-21,36;CL:0005020,6.74e-19,6;CL:0002138,6.74e-19,6;CL:0005022,6.74e-19,6;CL:0002139,3.85e-18,24;CL:0002078,8.45e-17,45;CL:0000213,7.33e-13,58;CL:0000215,7.33e-13,58;CL:0002188,4.55e-11,5;CL:1000746,3.70e-08,7;CL:1000612,3.70e-08,7;CL:0002545,1.75e-07,2;CL:0000222,2.85e-07,121;CL:0000071,8.67e-07,18;CL:0002546,8.67e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;5.26e-19;6!CL:0002546;8.58e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;1.23e-07;2!DOID:1907;1.23e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,1.20e-07,2;DOID:1907,1.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004535!1.18e-14!110;UBERON:0000055!3.94e-14!69;UBERON:0001009!5.09e-14!113;UBERON:0002049!8.35e-14!79;UBERON:0007798!8.35e-14!79;UBERON:0004872!1.28e-13!84;UBERON:0001981!1.46e-12!60;UBERON:0007500!1.46e-12!60;UBERON:0004537!1.46e-12!60;UBERON:0006965!1.46e-12!60;UBERON:0003914!7.05e-12!118;UBERON:0000477!7.17e-12!286;UBERON:0001986!1.39e-11!18;UBERON:0004638!1.39e-11!18;UBERON:0004852!1.39e-11!18;UBERON:0002119!4.09e-10!4;UBERON:0004531!4.09e-10!4;UBERON:0000490!9.26e-10!138;UBERON:0004111!1.70e-09!241;UBERON:0000119!2.45e-09!312;UBERON:0006914!2.53e-09!25;UBERON:0000487!4.74e-09!22;UBERON:0000483!5.03e-09!309;UBERON:0004573!8.10e-09!33;UBERON:0004571!8.10e-09!33;UBERON:0001638!1.02e-08!9;UBERON:0003920!1.02e-08!9;UBERON:0004582!1.02e-08!9;UBERON:0002066!1.58e-07!5;UBERON:0001637!2.41e-07!42;UBERON:0003509!2.41e-07!42;UBERON:0004572!2.41e-07!42;UBERON:0000025!2.61e-07!194;UBERON:0000914!6.48e-07!83;UBERON:0002329!6.48e-07!83;UBERON:0003077!6.48e-07!83;UBERON:0003059!6.48e-07!83;UBERON:0007282!6.48e-07!83;UBERON:0009618!6.48e-07!83;UBERON:0007285!6.48e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.85e-25;2!UBERON:0001473;2.03e-14;8!UBERON:0004536;2.03e-14;8!UBERON:0006558;2.03e-14;8!UBERON:0003296;3.02e-13;4!UBERON:0010133;3.02e-13;4!UBERON:0002465;1.17e-11;10!UBERON:0000074;4.19e-08;7!UBERON:0001229;4.19e-08;7!UBERON:0001894;5.86e-08;7!UBERON:0005800;1.87e-07;2!UBERON:0001515;1.87e-07;2!UBERON:0000055;7.81e-07;65!UBERON:0004638;8.58e-07;18!UBERON:0001986;8.58e-07;18!UBERON:0004852;8.58e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.12e-25,2;UBERON:0001473,2.44e-14,8;UBERON:0004536,2.44e-14,8;UBERON:0006558,2.44e-14,8;UBERON:0003296,2.35e-13,4;UBERON:0010133,2.35e-13,4;UBERON:0002465,1.36e-11,10;UBERON:0000055,2.56e-08,68;UBERON:0010532,3.70e-08,7;UBERON:0000074,3.70e-08,7;UBERON:0001229,3.70e-08,7;UBERON:0001230,3.70e-08,7;UBERON:0003220,3.70e-08,7;UBERON:0005749,3.70e-08,7;UBERON:0004199,3.70e-08,7;UBERON:0004209,3.70e-08,7;UBERON:0004198,3.70e-08,7;UBERON:0001894,5.10e-08,7;UBERON:0006222,5.10e-08,7;UBERON:0005800,1.75e-07,2;UBERON:0001515,1.75e-07,2;UBERON:0005103,3.05e-07,8;UBERON:0000083,3.05e-07,8;UBERON:0009201,3.05e-07,8;UBERON:0006553,3.05e-07,8;UBERON:0003074,3.05e-07,8;UBERON:0003060,3.05e-07,8;UBERON:0002049,3.58e-07,78;UBERON:0007798,3.58e-07,78;UBERON:0004111,4.48e-07,240;UBERON:0004638,8.67e-07,18;UBERON:0001986,8.67e-07,18;UBERON:0004852,8.67e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0,0,0,0,0,0,1.67360306382335,0,3.04108842287405,0,0,1.62028389576352,0.803697554556718,0.44905874525234,0.788280363383256,1.53316637465883,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.817309515567294,0,0,0,0,0.570471821544449,0,0,0,0,0.816616685019573,0.245668634623536,0.516628905878827,0,0.247266929278557,0,0,0.505008341862199,0,0.277064115484183,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,1.01056513432752,0,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,1.72732732881711,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,2.2054613741845,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0.709522128141196,0.422215270595328,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51002275065983,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0.568209015825267,0,0,0,0.151230923763239,0.932623203496683,4.73136479966829,2.23015474029183,0.449803112163605,0.621051827505038,0.829412415681711,0,0,0,0,0,0,0.429642228169954,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39337735327393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82089681270989,1.59363533945908,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:54206351..54206382,- | |||
}} |
Revision as of 05:25, 22 January 2014
Short description: | p@chr5:54206351..54206382, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:54206351..54206382, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.51e-21 | 36 |
lymphangioblast | 6.74e-19 | 6 |
endothelial cell of lymphatic vessel | 6.74e-19 | 6 |
vascular lymphangioblast | 6.74e-19 | 6 |
endothelial cell of vascular tree | 3.85e-18 | 24 |
meso-epithelial cell | 8.45e-17 | 45 |
lining cell | 7.33e-13 | 58 |
barrier cell | 7.33e-13 | 58 |
glomerular endothelial cell | 4.55e-11 | 5 |
glomerular cell | 3.70e-08 | 7 |
kidney corpuscule cell | 3.70e-08 | 7 |
thoracic aorta endothelial cell | 1.75e-07 | 2 |
mesodermal cell | 2.85e-07 | 121 |
blood vessel endothelial cell | 8.67e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.67e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.12e-25 | 2 |
lymphatic vessel | 2.44e-14 | 8 |
lymph vasculature | 2.44e-14 | 8 |
lymphatic part of lymphoid system | 2.44e-14 | 8 |
gland of diencephalon | 2.35e-13 | 4 |
neuroendocrine gland | 2.35e-13 | 4 |
lymphoid system | 1.36e-11 | 10 |
vessel | 2.56e-08 | 68 |
primitive nephron | 3.70e-08 | 7 |
renal glomerulus | 3.70e-08 | 7 |
renal corpuscle | 3.70e-08 | 7 |
glomerular capsule | 3.70e-08 | 7 |
metanephric mesenchyme | 3.70e-08 | 7 |
glomerular tuft | 3.70e-08 | 7 |
S-shaped body | 3.70e-08 | 7 |
renal vesicle | 3.70e-08 | 7 |
comma-shaped body | 3.70e-08 | 7 |
diencephalon | 5.10e-08 | 7 |
future diencephalon | 5.10e-08 | 7 |
segment of aorta | 1.75e-07 | 2 |
thoracic aorta | 1.75e-07 | 2 |
mesonephric epithelium | 3.05e-07 | 8 |
mesonephric tubule | 3.05e-07 | 8 |
nephric duct | 3.05e-07 | 8 |
renal duct | 3.05e-07 | 8 |
mesonephric duct | 3.05e-07 | 8 |
pronephric duct | 3.05e-07 | 8 |
vasculature | 3.58e-07 | 78 |
vascular system | 3.58e-07 | 78 |
anatomical conduit | 4.48e-07 | 240 |
blood vessel endothelium | 8.67e-07 | 18 |
endothelium | 8.67e-07 | 18 |
cardiovascular system endothelium | 8.67e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.20e-07 | 2 |
malignant fibroxanthoma | 1.20e-07 | 2 |