FFCP PHASE1:Hg19::chr5:138534047..138534064,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64374 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24624 | |||
|TSSclassifier=strong | |||
|UniProt=F5H0H2,Q9H173 | |||
|association_with_transcript=0bp_to_ENST00000537511,NM_001037633,NM_022464,uc003ldo.2,uc003ldp.2_5end | |||
|coexpression_cluster_id=C4467 | |||
|description=CAGE_peak_2_at_SIL1_5end | |||
|id=chr5:138534047..138534064,- | |||
|ontology_enrichment_celltype=CL:0000055!1.50e-16!180;CL:0000222!5.40e-16!119;CL:0000192!2.52e-14!42;CL:0000514!2.52e-14!42;CL:0000183!2.61e-14!59;CL:0000680!4.87e-14!57;CL:0000056!4.87e-14!57;CL:0000355!4.87e-14!57;CL:0000187!3.44e-13!54;CL:0000220!1.13e-12!246;CL:0002321!7.06e-12!248;CL:0000359!1.27e-11!32;CL:0000144!3.92e-10!625;CL:0000393!2.61e-09!60;CL:0000211!2.61e-09!60;CL:0002371!5.27e-09!591;CL:0000012!2.26e-07!682;CL:0000548!2.43e-07!679;CL:0000004!2.43e-07!679;CL:0000255!2.43e-07!679;CL:0000057!5.31e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.95e-11;32!CL:0000192;1.16e-09;43!CL:0000187;5.78e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.45e-15,121;CL:0000192,1.79e-13,43;CL:0000514,1.79e-13,43;CL:0000680,2.40e-13,58;CL:0000056,2.40e-13,58;CL:0000355,2.40e-13,58;CL:0000187,1.66e-12,55;CL:0002321,1.11e-11,250;CL:0000359,1.27e-11,32;CL:0000393,8.24e-09,61;CL:0000211,8.24e-09,61;CL:0000057,2.39e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.16e-09;43!CL:0000355;5.71e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!9.28e-17!143;UBERON:0002100!1.27e-14!216;UBERON:0003914!2.20e-14!118;UBERON:0002049!9.46e-14!79;UBERON:0007798!9.46e-14!79;UBERON:0001134!7.67e-13!61;UBERON:0002036!7.67e-13!61;UBERON:0003082!7.67e-13!61;UBERON:0000486!8.44e-13!82;UBERON:0004290!9.86e-13!70;UBERON:0000914!1.30e-12!83;UBERON:0002329!1.30e-12!83;UBERON:0003077!1.30e-12!83;UBERON:0003059!1.30e-12!83;UBERON:0007282!1.30e-12!83;UBERON:0009618!1.30e-12!83;UBERON:0007285!1.30e-12!83;UBERON:0002385!2.38e-12!63;UBERON:0001015!2.38e-12!63;UBERON:0000383!2.38e-12!63;UBERON:0000490!4.84e-12!138;UBERON:0000055!5.22e-12!69;UBERON:0003104!7.91e-12!238;UBERON:0009142!7.91e-12!238;UBERON:0004872!9.89e-12!84;UBERON:0001637!1.05e-11!42;UBERON:0003509!1.05e-11!42;UBERON:0004572!1.05e-11!42;UBERON:0001981!3.54e-11!60;UBERON:0007500!3.54e-11!60;UBERON:0004537!3.54e-11!60;UBERON:0006965!3.54e-11!60;UBERON:0000926!7.95e-11!448;UBERON:0004120!7.95e-11!448;UBERON:0006603!7.95e-11!448;UBERON:0009569!3.86e-09!113;UBERON:0004573!7.24e-09!33;UBERON:0004571!7.24e-09!33;UBERON:0001009!1.49e-08!113;UBERON:0004535!1.59e-08!110;UBERON:0000468!5.39e-08!659;UBERON:0000475!1.16e-07!365;UBERON:0000481!1.28e-07!347;UBERON:0000483!3.34e-07!309;UBERON:0000480!3.53e-07!626;UBERON:0002417!3.82e-07!61;UBERON:0000916!3.82e-07!61;UBERON:0000119!3.96e-07!312;UBERON:0000467!5.89e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.88e-09;42!UBERON:0003509;2.88e-09;42!UBERON:0004572;2.88e-09;42!UBERON:0004573;3.52e-08;33!UBERON:0004571;3.52e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.59e-16,122;UBERON:0003104,2.31e-16,160;UBERON:0009142,2.31e-16,160;UBERON:0003914,7.47e-15,117;UBERON:0002100,2.07e-14,199;UBERON:0007503,5.34e-14,78;UBERON:0002049,2.67e-13,78;UBERON:0007798,2.67e-13,78;UBERON:0000486,2.80e-12,83;UBERON:0001134,3.22e-12,62;UBERON:0002036,3.22e-12,62;UBERON:0003082,3.22e-12,62;UBERON:0002329,3.66e-12,71;UBERON:0003059,3.66e-12,71;UBERON:0007282,3.66e-12,71;UBERON:0004290,3.66e-12,71;UBERON:0009618,3.66e-12,71;UBERON:0007524,4.48e-12,73;UBERON:0000490,4.94e-12,148;UBERON:0002385,9.33e-12,64;UBERON:0001015,9.33e-12,64;UBERON:0000383,9.33e-12,64;UBERON:0001637,1.05e-11,42;UBERON:0003509,1.05e-11,42;UBERON:0004572,1.05e-11,42;UBERON:0003077,1.40e-11,72;UBERON:0007285,1.40e-11,72;UBERON:0000055,1.45e-11,68;UBERON:0004872,2.58e-11,83;UBERON:0007500,9.92e-11,59;UBERON:0001981,9.92e-11,59;UBERON:0004537,9.92e-11,59;UBERON:0006965,9.92e-11,59;UBERON:0009569,5.60e-09,112;UBERON:0000926,6.33e-09,315;UBERON:0004120,6.33e-09,315;UBERON:0006603,6.33e-09,315;UBERON:0004573,7.24e-09,33;UBERON:0004571,7.24e-09,33;UBERON:0001009,3.18e-08,112;UBERON:0004535,3.39e-08,109;UBERON:0002417,1.42e-07,60;UBERON:0000916,1.42e-07,60;UBERON:0005423,3.17e-07,581;UBERON:0000483,5.04e-07,306;UBERON:0000119,5.97e-07,309 | |||
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| |||
|short_description=p2@SIL1 | |||
}} |
Revision as of 07:43, 22 January 2014
Short description: | p2@SIL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIL1_5end |
Coexpression cluster: | C4467_Smooth_Fibroblast_Hepatocyte_pancreas_Mesenchymal_somatostatinoma_Adipocyte |
Association with transcript: | 0bp_to_ENST00000537511, NM_001037633, NM_022464, uc003ldo.2, uc003ldp.2_5end |
EntrezGene: | SIL1 |
HGNC: | 24624 |
UniProt: | F5H0H2Q9H173 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.45e-15 | 121 |
smooth muscle cell | 1.79e-13 | 43 |
smooth muscle myoblast | 1.79e-13 | 43 |
muscle precursor cell | 2.40e-13 | 58 |
myoblast | 2.40e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.40e-13 | 58 |
muscle cell | 1.66e-12 | 55 |
embryonic cell | 1.11e-11 | 250 |
vascular associated smooth muscle cell | 1.27e-11 | 32 |
electrically responsive cell | 8.24e-09 | 61 |
electrically active cell | 8.24e-09 | 61 |
fibroblast | 2.39e-07 | 76 |