FFCP PHASE1:Hg19::chr6:3752171..3752174,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21361 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TGL8 | |||
|association_with_transcript=71bp_to_NM_183373,uc003mvt.2_5end | |||
|description=CAGE_peak_4_at_PXDC1_5end | |||
|id=chr6:3752171..3752174,- | |||
|ontology_enrichment_celltype=CL:0000222!1.13e-16!119;CL:0000220!8.99e-14!246;CL:0002321!2.62e-13!248;CL:0000213!5.79e-13!57;CL:0000215!5.79e-13!57;CL:0000055!8.55e-13!180;CL:0000115!1.43e-11!35;CL:0002078!1.76e-10!44;CL:0002139!2.60e-10!24;CL:0000071!3.16e-09!18;CL:0002546!3.16e-09!18;CL:0000066!1.27e-08!254;CL:0000076!1.12e-07!62;CL:0000057!3.10e-07!75;CL:0000183!3.43e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.04e-13;36!CL:0002139;2.10e-12;24!CL:0000071;1.10e-10;18!CL:0002078;4.90e-10;45!CL:1000413;4.33e-09;9!CL:0000182;4.01e-08;12!CL:0000213;7.27e-08;58!CL:0000215;7.27e-08;58!CL:1000746;4.57e-07;7!CL:1000612;4.57e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.13e-16,36;CL:0000213,2.78e-15,58;CL:0000215,2.78e-15,58;CL:0002078,7.29e-14,45;CL:0002139,2.49e-12,24;CL:0000222,3.25e-12,121;CL:0000071,1.23e-10,18;CL:0002546,1.23e-10,18;CL:0002321,6.93e-09,250;CL:1000413,7.01e-09,9;CL:0000182,5.95e-08,12;CL:0000066,9.40e-08,253;CL:1000746,3.79e-07,7;CL:1000612,3.79e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.10e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.14e-23!118;UBERON:0000490!9.37e-18!138;UBERON:0000119!7.42e-17!312;UBERON:0000477!1.08e-16!286;UBERON:0000483!3.53e-16!309;UBERON:0004872!5.93e-16!84;UBERON:0005256!3.63e-15!143;UBERON:0002049!8.45e-15!79;UBERON:0007798!8.45e-15!79;UBERON:0000481!1.63e-13!347;UBERON:0004111!3.50e-13!241;UBERON:0000055!9.15e-13!69;UBERON:0002100!9.51e-13!216;UBERON:0001981!1.23e-12!60;UBERON:0007500!1.23e-12!60;UBERON:0004537!1.23e-12!60;UBERON:0006965!1.23e-12!60;UBERON:0000025!2.64e-12!194;UBERON:0003104!4.06e-12!238;UBERON:0009142!4.06e-12!238;UBERON:0000468!5.03e-12!659;UBERON:0004535!3.75e-11!110;UBERON:0001009!4.70e-11!113;UBERON:0000475!6.80e-11!365;UBERON:0000467!7.46e-11!625;UBERON:0000480!1.25e-10!626;UBERON:0002417!2.04e-09!61;UBERON:0000916!2.04e-09!61;UBERON:0001986!3.16e-09!18;UBERON:0004638!3.16e-09!18;UBERON:0004852!3.16e-09!18;UBERON:0002107!1.20e-08!19;UBERON:0006925!1.20e-08!19;UBERON:0008836!1.20e-08!19;UBERON:0000926!2.21e-08!448;UBERON:0004120!2.21e-08!448;UBERON:0006603!2.21e-08!448;UBERON:0001637!4.05e-08!42;UBERON:0003509!4.05e-08!42;UBERON:0004572!4.05e-08!42;UBERON:0002050!4.07e-08!605;UBERON:0005423!4.07e-08!605;UBERON:0005172!5.01e-08!55;UBERON:0005173!5.01e-08!55;UBERON:0000923!6.29e-08!604;UBERON:0005291!6.29e-08!604;UBERON:0006598!6.29e-08!604;UBERON:0002532!6.29e-08!604;UBERON:0000487!6.75e-08!22;UBERON:0000922!8.90e-08!612;UBERON:0001048!1.17e-07!168;UBERON:0006914!1.24e-07!25;UBERON:0009497!2.08e-07!25;UBERON:0000015!2.08e-07!25;UBERON:0002423!2.08e-07!25;UBERON:0006235!2.08e-07!25;UBERON:0004161!2.08e-07!25;UBERON:0008835!4.53e-07!22;UBERON:0003894!4.53e-07!22;UBERON:0009569!4.93e-07!113;UBERON:0009854!6.01e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.10e-10;18!UBERON:0001986;1.10e-10;18!UBERON:0004852;1.10e-10;18!UBERON:0002107;5.46e-10;19!UBERON:0006925;5.46e-10;19!UBERON:0006914;1.17e-09;25!UBERON:0000487;2.59e-09;22!UBERON:0003915;4.33e-09;9!UBERON:0004700;4.33e-09;9!UBERON:0001917;4.33e-09;9!UBERON:0000490;1.68e-08;33!UBERON:0002423;2.34e-07;25!UBERON:0000074;4.57e-07;7!UBERON:0001229;4.57e-07;7!UBERON:0000353;9.03e-07;15!UBERON:0001637;9.61e-07;42!UBERON:0003509;9.61e-07;42!UBERON:0004572;9.61e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.38e-20,117;UBERON:0004872,7.54e-14,83;UBERON:0002049,1.73e-12,78;UBERON:0007798,1.73e-12,78;UBERON:0000490,8.95e-12,148;UBERON:0004535,2.86e-11,109;UBERON:0004638,1.23e-10,18;UBERON:0001986,1.23e-10,18;UBERON:0004852,1.23e-10,18;UBERON:0001009,1.50e-10,112;UBERON:0000055,2.59e-10,68;UBERON:0002107,5.22e-10,19;UBERON:0006925,5.22e-10,19;UBERON:0008836,5.22e-10,19;UBERON:0007500,1.30e-09,59;UBERON:0001981,1.30e-09,59;UBERON:0004537,1.30e-09,59;UBERON:0006965,1.30e-09,59;UBERON:0000119,1.37e-09,309;UBERON:0006914,1.67e-09,25;UBERON:0000487,2.90e-09,22;UBERON:0000483,3.81e-09,306;UBERON:0000025,5.98e-09,192;UBERON:0003915,7.01e-09,9;UBERON:0004700,7.01e-09,9;UBERON:0001917,7.01e-09,9;UBERON:0002417,8.29e-09,60;UBERON:0000916,8.29e-09,60;UBERON:0004111,2.28e-08,240;UBERON:0008835,5.69e-08,22;UBERON:0003894,5.69e-08,22;UBERON:0009854,2.03e-07,23;UBERON:0009497,2.09e-07,25;UBERON:0000015,2.09e-07,25;UBERON:0002423,2.09e-07,25;UBERON:0006235,2.09e-07,25;UBERON:0004161,2.09e-07,25;UBERON:0003104,2.75e-07,160;UBERON:0009142,2.75e-07,160;UBERON:0005172,3.63e-07,54;UBERON:0005173,3.63e-07,54;UBERON:0010532,3.79e-07,7;UBERON:0000074,3.79e-07,7;UBERON:0001229,3.79e-07,7;UBERON:0001230,3.79e-07,7;UBERON:0003220,3.79e-07,7;UBERON:0005749,3.79e-07,7;UBERON:0004199,3.79e-07,7;UBERON:0004209,3.79e-07,7;UBERON:0004198,3.79e-07,7;UBERON:0001637,3.92e-07,42;UBERON:0003509,3.92e-07,42;UBERON:0004572,3.92e-07,42;UBERON:0000353,5.89e-07,15;UBERON:0005256,6.92e-07,122 | |||
|phase1_expression=1.2717486548939,1.07050261945492,1.26858963686374,1.0007329835313,3.12872766099101,2.61701557230111,0,0.631719873426831,0.522371256399677,0,2.79120467188971,0.873765488520689,2.11013582582763,0.247532705920093,1.65698687863958,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,1.47745269692145,2.24400760368678,3.76145665773705,1.14494394852423,0.958120975510189,2.13422487311165,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0.32389366601898,0.515151135268373,0,0.377875943688809,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.511450247374121,0,0.50133791063589,1.44846518960824,0.795285947051099,1.45990461090791,0.189069634328136,1.55210578223795,1.58102614247627,0.327447688744282,0.364295288292542,0.741568885568859,0,0.348259474598534,0.26591592103773,0,0,0.371457501329565,1.19257444420023,3.4409383804245,2.42998351125316,2.26123176769604,3.77549492588915,3.85165258716094,1.67195973229448,1.55050055501597,1.06729878806013,0.33472061276467,2.81980521976403,0.760272105718513,5.6134273236079,1.10298924103761,4.86085168729056,1.42879565254528,2.02076435363553,0.900891843866578,1.53316637465883,0.949265659568129,2.5648244150257,0,0,0,0.993943903390637,1.13967460498122,0.529636723252875,0.573673241497627,1.06400514659507,2.24271040056923,1.06748995729705,2.4666754841716,0.311211035399766,1.61652806483626,1.9615428373615,0.454072282934794,1.15235184896,0.937285727335186,0.312160076830321,0.570471821544449,0.448346041655403,1.40921398372518,2.42809416552197,1.40450806702248,0.61246251376468,0.737005903870608,1.44656093646072,1.18800285728205,3.21447008062124,0,0.718618141816238,0.841680569770331,0.500474079487857,0.277064115484183,0.877955241761676,1.22595118319608,1.65261864797256,1.13432183160021,0.538168907066586,1.49490172172997,1.27159140695737,0.300091096084402,0.721367704669072,0.515281080091258,0.558350568994769,0,1.46155507741798,0.252433774244115,0.368199594569197,0.646584227275248,1.42003837006646,0.906768884048762,1.01736355386293,0,0,0.573609190778008,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,1.18306800039844,1.01150814046861,0.723033089650446,0.55146986366197,1.74303555273925,2.13543557199987,0.674156540800822,0.784885860501384,1.53898862778556,5.16708818237254,2.80483547606892,0.8231480226628,2.94017422771084,1.26755034821831,6.87979051674338,1.18157981336281,0,1.47586126251736,0.686271241194102,0.439001141634502,1.1240175325762,0.603173834469785,0.370353780634118,3.58389135841357,0,2.88662684050547,0.231860809950154,0.352226082707465,1.01056513432752,1.85194205030644,1.52203321787679,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.503946384596579,0,0.358234090811393,0.290633938513962,1.91691339582606,0,0,1.03664057770386,0.720599767084807,1.2624243342638,0.571481048629521,0,0,1.71072446022705,1.02827492703324,0.901029173531752,0.857479297891735,1.79409734952577,1.30788020649984,0.66004457238855,0.646358578788889,0,0,1.32969058292435,2.08014873822732,1.28603687131071,0,0.266422179016099,1.28680194292333,4.88359444852299,1.64648067356154,0.977208552881205,0.710783897485092,0.791951872933429,0.904318131178758,0,1.3996218765488,0,0.502257091432126,0,0.718874566474748,4.59447743336456,0,0.434343920002738,1.43833425785268,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0.837581326671744,0,0,0,0,0.736148950314839,0.500170521059677,1.08506009479894,2.28767947683888,1.96271887676878,1.57702415033935,1.05427273493442,1.50473049863859,2.27407504055985,1.03473071292505,1.99267679560631,2.02806085395873,0.60818530127658,1.95801157462741,1.02943027143257,0,0,0.106727557803444,2.72814814301633,0,3.93107381328584,0.248107807818777,0.460385919864187,2.24528075546459,1.02511319404561,0.511707249066704,1.93024705372329,2.96836132889982,0.771048469013278,0.532685175939381,0.328508624055237,1.03850885836724,0.581051892299796,1.32945394550784,0.601519410909855,0.736647911487171,0.803701137152247,1.45672934405374,1.18011973463482,2.25599806453706,0.693138033939733,4.70609861506113,2.92278449306521,0.422206515571503,1.13733384070897,2.38131187387122,1.94324324491925,9.25363516141736,1.35473218771926,4.01351819083883,0.509752546090077,0,0.671624264166535,0,0,0.769350375349168,2.95213181129735,2.60302715731442,0.824328093181778,0.366277859273374,0.165018999841176,0.574265537996172,1.30012049207304,3.21367859688319,0.580024309752732,0.462145851343933,0.614014698904518,0.827019434907183,0.214840489736547,0.435050081742686,1.10794615640931,0.623224249527161,0.165284915360978,0.384380134730212,0.127612712494584,0.6069466851333,1.85938219718914,0.944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| |||
|short_description=p4@PXDC1 | |||
}} |
Revision as of 09:44, 22 January 2014
Short description: | p4@PXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_NM_183373, uc003mvt.2_5end |
EntrezGene: | PXDC1 |
HGNC: | 21361 |
UniProt: | Q5TGL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.13e-16 | 36 |
lining cell | 2.78e-15 | 58 |
barrier cell | 2.78e-15 | 58 |
meso-epithelial cell | 7.29e-14 | 45 |
endothelial cell of vascular tree | 2.49e-12 | 24 |
mesodermal cell | 3.25e-12 | 121 |
blood vessel endothelial cell | 1.23e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.23e-10 | 18 |
embryonic cell | 6.93e-09 | 250 |
endothelial cell of artery | 7.01e-09 | 9 |
hepatocyte | 5.95e-08 | 12 |
epithelial cell | 9.40e-08 | 253 |
glomerular cell | 3.79e-07 | 7 |
kidney corpuscule cell | 3.79e-07 | 7 |