FFCP PHASE1:Hg19::chr6:75994025..75994057,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=55754 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16667 | |||
|TSSclassifier=strong | |||
|UniProt=E5RG19 | |||
|association_with_transcript=0bp_to_ENST00000518161_5end | |||
|description=CAGE_peak_3_at_TMEM30A_5end | |||
|id=chr6:75994025..75994057,- | |||
|ontology_enrichment_celltype=CL:0002139!1.10e-11!24;CL:0000071!1.77e-10!18;CL:0002546!1.77e-10!18;CL:0000115!4.54e-07!35;CL:1000413!5.75e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.56e-15;24!CL:0000071;1.28e-11;18!CL:0000064;1.05e-09;3!CL:0000067;1.05e-09;3!CL:0005012;1.05e-09;3!CL:0002304;1.05e-09;3!CL:0002144;1.15e-09;3!CL:0000115;2.03e-09;36!CL:0002544;4.65e-08;6!CL:1000413;6.08e-08;9!CL:0002545;4.54e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.45e-15,24;CL:0000071,1.58e-11,18;CL:0002546,1.58e-11,18;CL:0000115,7.79e-11,36;CL:0002144,1.24e-09,3;CL:0000064,1.43e-09,3;CL:0000067,1.43e-09,3;CL:0005012,1.43e-09,3;CL:0002304,1.43e-09,3;CL:0002078,4.33e-08,45;CL:0002544,8.73e-08,6;CL:1000413,1.04e-07,9;CL:0002545,7.85e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.28e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.79e-14!82;UBERON:0005743!1.93e-13!86;UBERON:0000073!5.13e-12!94;UBERON:0001016!5.13e-12!94;UBERON:0001869!1.74e-11!32;UBERON:0000487!6.70e-11!22;UBERON:0001893!9.23e-11!34;UBERON:0001986!1.77e-10!18;UBERON:0004638!1.77e-10!18;UBERON:0004852!1.77e-10!18;UBERON:0000955!1.90e-10!69;UBERON:0006238!1.90e-10!69;UBERON:0002791!3.54e-10!33;UBERON:0002780!6.06e-10!41;UBERON:0001890!6.06e-10!41;UBERON:0006240!6.06e-10!41;UBERON:0001049!1.36e-09!57;UBERON:0005068!1.36e-09!57;UBERON:0006241!1.36e-09!57;UBERON:0007135!1.36e-09!57;UBERON:0006914!1.52e-09!25;UBERON:0003080!1.95e-09!42;UBERON:0003056!2.90e-09!61;UBERON:0002020!4.77e-09!34;UBERON:0003528!4.77e-09!34;UBERON:0003075!7.13e-09!86;UBERON:0007284!7.13e-09!86;UBERON:0000025!7.44e-09!194;UBERON:0002619!8.35e-09!22;UBERON:0002616!9.57e-09!59;UBERON:0000956!1.50e-08!25;UBERON:0000203!1.50e-08!25;UBERON:0002346!3.89e-08!90;UBERON:0002049!5.54e-08!79;UBERON:0007798!5.54e-08!79;UBERON:0000119!6.58e-08!312;UBERON:0000483!6.94e-08!309;UBERON:0004111!7.21e-08!241;UBERON:0000477!1.32e-07!286;UBERON:0001950!1.46e-07!20;UBERON:0000475!4.24e-07!365;UBERON:0000055!5.53e-07!69;UBERON:0003915!5.75e-07!9;UBERON:0004700!5.75e-07!9;UBERON:0001917!5.75e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;3.33e-12;4!UBERON:0004638;1.28e-11;18!UBERON:0001986;1.28e-11;18!UBERON:0004852;1.28e-11;18!UBERON:0000487;2.36e-11;22!UBERON:0000490;3.36e-11;33!UBERON:0006914;9.56e-10;25!UBERON:0000349;9.78e-10;5!UBERON:0001778;1.05e-09;3!UBERON:0001775;1.05e-09;3!UBERON:0010523;1.15e-09;3!UBERON:0001915;1.15e-09;3!UBERON:0001982;1.15e-09;3!UBERON:0007625;4.72e-09;11!UBERON:0001869;3.44e-08;32!UBERON:0002420;3.77e-08;9!UBERON:0007245;3.77e-08;9!UBERON:0010009;3.77e-08;9!UBERON:0010011;3.77e-08;9!UBERON:0000454;3.77e-08;9!UBERON:0002203;3.89e-08;6!UBERON:0001768;3.89e-08;6!UBERON:0002200;3.89e-08;6!UBERON:0003915;6.08e-08;9!UBERON:0004700;6.08e-08;9!UBERON:0001917;6.08e-08;9!UBERON:0000369;1.42e-07;4!UBERON:0002435;1.42e-07;4!UBERON:0000204;1.42e-07;4!UBERON:0002791;2.88e-07;32!UBERON:0001893;3.19e-07;34!UBERON:0005800;4.54e-07;2!UBERON:0001515;4.54e-07;2!UBERON:0001801;5.83e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.19e-12,61;UBERON:0000488,6.74e-12,4;UBERON:0004638,1.58e-11,18;UBERON:0001986,1.58e-11,18;UBERON:0004852,1.58e-11,18;UBERON:0000487,2.45e-11,22;UBERON:0002049,5.72e-10,78;UBERON:0007798,5.72e-10,78;UBERON:0000349,5.77e-10,5;UBERON:0006914,9.88e-10,25;UBERON:0010523,1.24e-09,3;UBERON:0001915,1.24e-09,3;UBERON:0001982,1.24e-09,3;UBERON:0001778,1.43e-09,3;UBERON:0001775,1.43e-09,3;UBERON:0007625,5.52e-09,11;UBERON:0001869,1.33e-08,32;UBERON:0002420,2.45e-08,9;UBERON:0007245,2.45e-08,9;UBERON:0010009,2.45e-08,9;UBERON:0010011,2.45e-08,9;UBERON:0000454,2.45e-08,9;UBERON:0003075,5.52e-08,82;UBERON:0007284,5.52e-08,82;UBERON:0001893,5.56e-08,34;UBERON:0002203,6.13e-08,6;UBERON:0001768,6.13e-08,6;UBERON:0002200,6.13e-08,6;UBERON:0003915,1.04e-07,9;UBERON:0004700,1.04e-07,9;UBERON:0001917,1.04e-07,9;UBERON:0002780,1.42e-07,41;UBERON:0001890,1.42e-07,41;UBERON:0003080,1.42e-07,41;UBERON:0006240,1.42e-07,41;UBERON:0000369,1.42e-07,4;UBERON:0002435,1.42e-07,4;UBERON:0000204,1.42e-07,4;UBERON:0010082,1.42e-07,4;UBERON:0002346,2.03e-07,86;UBERON:0000055,2.90e-07,68;UBERON:0001017,3.13e-07,81;UBERON:0002791,3.99e-07,32;UBERON:0001876,5.02e-07,2;UBERON:0000955,5.14e-07,68;UBERON:0006238,5.14e-07,68;UBERON:0001801,6.57e-07,14;UBERON:0001871,7.15e-07,6;UBERON:0005800,7.85e-07,2;UBERON:0001515,7.85e-07,2 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.563817616383885,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,2.01697543935533,1.80808358407193,1.46062018077475,0.975865597581014,0.492484232307152,0,0,0.572471974262113,0,0.125542639594803,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.426507697462265,0.587200878669695,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,1.22895262313288,4.21285855178871,1.31752178539689,1.44076983047484,0,0,0.649094787309367,1.21890816109487,0.664789802594326,0,0.571994910780128,0,1.19257444420023,0.860234595106124,1.38856200643038,0.56530794192401,0.838998872419812,1.37559020970034,0.417989933073621,1.03366703667732,3.5576626268671,4.01664735317604,3.22263453687318,1.52054421143703,1.22031028774085,1.10298924103761,2.43042584364528,0.892997282840798,0.44905874525234,0.337834441449967,0,1.89853131913626,0.549605231791222,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.717558542755448,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,0.772921620136887,0,0,0.292311015483596,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0.609868530647977,0.132529768321485,0.116193942869518,0.829288440122964,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0.474541238222193,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,0.34779121492523,1.52631302506568,0.144366447761074,0,0.190254152234598,0,1.71697232418975,0,0.234004265139238,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0,0.508189248444927,2.60279707715243,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0,0.868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0.532685175939381,0.328508624055237,1.55776328755086,0.581051892299796,0,0,0,0.803701137152247,0.546273504020151,1.70461739447251,0,0.847168708148562,0,1.46139224653261,2.11103257785751,0,0,0.647747748306418,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.751941714077915,0.290033387828457,0,0.445160178233687,0,0,0.127612712494584,0,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0,0.429374660225974,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,1.97859703341646,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0.731140468893853,0,0.545999645631943,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,5.77487913158015,0,0.371606350251437,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22896305723383,0.447352215784832,1.00109485027145,0,0.278406173895242,0,0,0,0,0,0,0.606802608747567,0.222886768554957,0,0.23874448473769,0.296964680832639,0,1.9882952955326,1.40669416410513,0,0,1.47787785689595,0.398495976502139,0.276283915531148,0,5.62477753761851,0.123084805461069,0.622079175323615,0.0898683511473268,0,0,0,0,0,1.93866549219044,0.649376687132959,0,0.520855522170466,0,0,0.227586896570999,0.762760950878299,0,0,0,0.347249989866585,2.65722415744152,0.964771509003264,0,0.221158519862449,0.591095237907095,2.19385397153973,0.10893846351899,0,0,0,0,0.0897576444097721,0,0.31900115973192,0.366390373607449,0,0,0.31396051279005,0,0,0,0.167821586975843,0.189753732724185,0,0.210998064528027,4.08082020397869,0.141353071433941,0,0,0.176915129006678,0,0.296521128680622,0.494255755786011,0.208843899010911,0.067401132980677,0,0.937057782901357,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.126373159256976,0.901940516486955,0.311064574191741,0,0,0,0,0,0,1.04135843001079,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0.451961481561065,0.137041924646751,0.19871461170299,0.569797163602908,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0.114536596165916,0,0,1.36677789121976,0,0.271808412147228,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,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| |||
|short_description=p3@TMEM30A | |||
}} |
Revision as of 12:44, 22 January 2014
Short description: | p3@TMEM30A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TMEM30A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518161_5end |
EntrezGene: | TMEM30A |
HGNC: | 16667 |
UniProt: | E5RG19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.45e-15 | 24 |
blood vessel endothelial cell | 1.58e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.58e-11 | 18 |
endothelial cell | 7.79e-11 | 36 |
capillary endothelial cell | 1.24e-09 | 3 |
ciliated cell | 1.43e-09 | 3 |
ciliated epithelial cell | 1.43e-09 | 3 |
multi-ciliated epithelial cell | 1.43e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.43e-09 | 3 |
meso-epithelial cell | 4.33e-08 | 45 |
aortic endothelial cell | 8.73e-08 | 6 |
endothelial cell of artery | 1.04e-07 | 9 |
thoracic aorta endothelial cell | 7.85e-07 | 2 |