FFCP PHASE1:Hg19::chr6:138423214..138423233,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_at_chr6:138423214..138423233,- | |||
|id=chr6:138423214..138423233,- | |||
|ontology_enrichment_celltype=CL:0002253!9.33e-09!2;CL:0000499!2.76e-08!27;CL:0002537!4.56e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002590;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.07e-23;1!UBERON:0010227;1.34e-23;1!UBERON:0005062;6.42e-23;4!UBERON:0007284;6.42e-23;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;4.10e-23;1!DOID:4549;4.10e-23;1!DOID:5861;4.10e-23;1!DOID:6496;4.10e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.40e-23,1;DOID:4549,6.40e-23,1;DOID:5861,6.40e-23,1;DOID:6496,6.40e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0000305!1.25e-09!7;UBERON:0007100!4.50e-09!27;UBERON:0004871!1.98e-08!8;UBERON:0004923!7.76e-08!57;UBERON:0005631!3.83e-07!14;UBERON:0000158!3.83e-07!14;UBERON:0003978!6.97e-07!3;UBERON:0009751!6.97e-07!3;UBERON:0000946!6.97e-07!3;UBERON:0002523!6.97e-07!3;UBERON:0005983!6.97e-07!3;UBERON:0002165!6.97e-07!3;UBERON:0002062!6.97e-07!3;UBERON:0007280!6.97e-07!3;UBERON:0004151!7.59e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.59e-30;3!UBERON:0000946;3.59e-30;3!UBERON:0002079;1.34e-23;1!UBERON:0002146;2.09e-23;1!UBERON:0005623;2.09e-23;1!UBERON:0002135;4.10e-23;1!UBERON:0007100;2.49e-22;25!UBERON:0000948;1.57e-16;22!UBERON:0002081;1.65e-12;2!UBERON:0002133;2.90e-12;2!UBERON:0010313;8.84e-10;10!UBERON:0004151;8.96e-09;3!UBERON:0002418;1.30e-08;3!UBERON:0004755;1.30e-08;3!UBERON:0003103;3.39e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.67e-30,3;UBERON:0009751,2.67e-30,3;UBERON:0000946,2.67e-30,3;UBERON:0002523,2.67e-30,3;UBERON:0005983,2.67e-30,3;UBERON:0002165,2.67e-30,3;UBERON:0002062,2.67e-30,3;UBERON:0007280,2.67e-30,3;UBERON:0002079,1.34e-23,1;UBERON:0002146,2.10e-23,1;UBERON:0005623,2.10e-23,1;UBERON:0002135,2.62e-23,1;UBERON:0007100,9.81e-21,27;UBERON:0000948,3.18e-15,24;UBERON:0005498,3.18e-15,24;UBERON:0004140,3.18e-15,24;UBERON:0009881,3.18e-15,24;UBERON:0004141,3.18e-15,24;UBERON:0003084,3.18e-15,24;UBERON:0007005,3.18e-15,24;UBERON:0004139,3.18e-15,24;UBERON:0004291,3.18e-15,24;UBERON:0004797,1.31e-13,7;UBERON:0002081,1.65e-12,2;UBERON:0010227,1.65e-12,2;UBERON:0002133,2.32e-12,2;UBERON:0010313,8.09e-10,10;UBERON:0002342,8.09e-10,10;UBERON:0005062,8.09e-10,10;UBERON:0004151,8.96e-09,3;UBERON:0002418,1.51e-08,3;UBERON:0004755,1.51e-08,3;UBERON:0003103,2.40e-08,68;UBERON:0001009,4.12e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.309157587715317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,1.58189712359363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,1.48482340416319,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,1.235585773681,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,2.29160424011684,0,0,0.429226048136571,4.68660060627932,10.9509060153364,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,1.26698501011437,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:138423214..138423233,- | |||
}} |
Revision as of 14:13, 22 January 2014
Short description: | p@chr6:138423214..138423233, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:138423214..138423233, - |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 2.67e-30 | 3 |
cardiac mesenchyme | 2.67e-30 | 3 |
cardial valve | 2.67e-30 | 3 |
tunica intima | 2.67e-30 | 3 |
heart layer | 2.67e-30 | 3 |
endocardium | 2.67e-30 | 3 |
endocardial cushion | 2.67e-30 | 3 |
presumptive endocardium | 2.67e-30 | 3 |
left cardiac atrium | 1.34e-23 | 1 |
pulmonary valve | 2.10e-23 | 1 |
semi-lunar valve | 2.10e-23 | 1 |
mitral valve | 2.62e-23 | 1 |
primary circulatory organ | 9.81e-21 | 27 |
heart | 3.18e-15 | 24 |
primitive heart tube | 3.18e-15 | 24 |
primary heart field | 3.18e-15 | 24 |
anterior lateral plate mesoderm | 3.18e-15 | 24 |
heart tube | 3.18e-15 | 24 |
heart primordium | 3.18e-15 | 24 |
cardiac mesoderm | 3.18e-15 | 24 |
cardiogenic plate | 3.18e-15 | 24 |
heart rudiment | 3.18e-15 | 24 |
blood vessel layer | 1.31e-13 | 7 |
cardiac atrium | 1.65e-12 | 2 |
future cardiac atrium | 1.65e-12 | 2 |
atrioventricular valve | 2.32e-12 | 2 |
neural crest-derived structure | 8.09e-10 | 10 |
neural crest | 8.09e-10 | 10 |
neural fold | 8.09e-10 | 10 |
cardiac chamber | 8.96e-09 | 3 |
cartilage tissue | 1.51e-08 | 3 |
skeletal tissue | 1.51e-08 | 3 |
compound organ | 2.40e-08 | 68 |
circulatory system | 4.12e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.40e-23 | 1 |
extraosseous chondrosarcoma | 6.40e-23 | 1 |
myxoid chondrosarcoma | 6.40e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 6.40e-23 | 1 |