FFCP PHASE1:Hg19::chr7:193412..193430,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56975 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22140 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IXL6 | |||
|association_with_transcript=299bp_to_BC040074_5end | |||
|description=CAGE_peak_5_at_FAM20C_5end | |||
|id=chr7:193412..193430,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.02e-13!180;CL:0000057!4.65e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000153;4.12e-15;9!CL:0000447;4.12e-15;9!CL:0000327;8.46e-14;15!CL:0002521;1.36e-12;3!CL:0000214;2.84e-12;3!CL:0000499;2.87e-10;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.57e-15,9;CL:0000447,3.57e-15,9;CL:0000327,6.30e-14,15;CL:0002521,1.44e-12,3;CL:0000214,1.81e-12,3;CL:0000499,2.73e-10,28 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.25e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.36e-12;3!UBERON:0006915;2.84e-12;3!UBERON:0007616;2.84e-12;3!UBERON:0002217;2.84e-12;3!UBERON:0002018;2.84e-12;3!UBERON:0000941;1.25e-09;1!UBERON:0002171;1.25e-09;1!UBERON:0001785;1.25e-09;1!UBERON:0002464;1.25e-09;1!UBERON:0004904;1.25e-09;1!UBERON:0001021;1.25e-09;1!UBERON:0006518;1.25e-09;1!UBERON:0008949;1.25e-09;1!UBERON:0000101;1.25e-09;1!UBERON:0002167;1.25e-09;1!UBERON:0004457;5.66e-09;9!UBERON:0000042;5.66e-09;9!UBERON:0002067;5.66e-09;9!UBERON:0002072;6.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.44e-12,3;UBERON:0006915,1.81e-12,3;UBERON:0007616,1.81e-12,3;UBERON:0002217,1.81e-12,3;UBERON:0002018,1.81e-12,3;UBERON:0000941,8.91e-10,1;UBERON:0001785,8.91e-10,1;UBERON:0002464,8.91e-10,1;UBERON:0004904,8.91e-10,1;UBERON:0001021,8.91e-10,1;UBERON:0003902,8.91e-10,1;UBERON:0005425,8.91e-10,1;UBERON:0002171,1.36e-09,1;UBERON:0006518,1.36e-09,1;UBERON:0008949,1.36e-09,1;UBERON:0000101,1.36e-09,1;UBERON:0002167,1.36e-09,1;UBERON:0002067,4.95e-09,9;UBERON:0004016,4.95e-09,9;UBERON:0010083,4.95e-09,9;UBERON:0002072,6.97e-08,5;UBERON:0004923,4.33e-07,66;UBERON:0004457,7.33e-07,12;UBERON:0000042,7.33e-07,12 | |||
|phase1_expression=0.54503513781167,0.642301571672949,1.12763523276777,0,0,0,0,3.15859936713415,2.35067065379855,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0.447830948479849,0,0.77272670290256,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0.918251677112708,0,0,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,1.44846518960824,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,2.80944069147288,0,1.34503812496621,0.23486899728753,0,0,0.204154171254893,0.491337269247072,0.619954687054593,1.18800285728205,0.741800787835671,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,1.20190447125277,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0,0,0.37223371266318,0,0.389748020644795,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0.381988425558278,1.17217447210047,0,0,0,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0.601892199455438,4.5481500811197,0,0,0,0.173767228936166,0.391602314925481,0,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.896974044789907,0,0.321707842287215,0,0.154209693802656,0.887808626565635,0.246381468041427,0.519254429183621,0.464841513839837,0,0.40101294060657,0,0.34444334449382,0,1.04899531967539,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,1.45006077438183,0.616194468458578,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.170453254832202,0.890320356467374,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0,0.511795582622668,0,1.27281299170375,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0.7133421029625,0,2.53329162357197,1.64647446479951,0,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0.61214552326098,0,0,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0.0821154570532092,0.193978032976839,0,0,0.274083849293502,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0.170388021785422,0.113312091520126,0.293104467356165,0,0.129282956361551,0,0,0,0.106787412567695,0,1.24271716604159,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,1.66441758450784,0.189403005275089,0,0,0,0.604923695052956,0.310874401165561,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0.363697318405119,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0.244736704506468,0.71635536432595,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.6124909547064,0.192687675289379,0,0,0.205116364240755,0,0,0,1.42769420259154,0.196295437002051,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,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| |||
|short_description=p5@FAM20C | |||
}} |
Revision as of 15:19, 22 January 2014
Short description: | p5@FAM20C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM20C_5end |
Coexpression cluster: | NA |
Association with transcript: | 299bp_to_BC040074_5end |
EntrezGene: | FAM20C |
HGNC: | 22140 |
UniProt: | Q8IXL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.57e-15 | 9 |
carbohydrate secreting cell | 3.57e-15 | 9 |
extracellular matrix secreting cell | 6.30e-14 | 15 |
subcutaneous fat cell | 1.44e-12 | 3 |
synovial cell | 1.81e-12 | 3 |
stromal cell | 2.73e-10 | 28 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.44e-12 | 3 |
stratified squamous epithelium | 1.81e-12 | 3 |
layer of synovial tissue | 1.81e-12 | 3 |
synovial joint | 1.81e-12 | 3 |
synovial membrane of synovial joint | 1.81e-12 | 3 |
cranial nerve II | 8.91e-10 | 1 |
cranial nerve | 8.91e-10 | 1 |
nerve trunk | 8.91e-10 | 1 |
nerve connecting eye with brain | 8.91e-10 | 1 |
nerve | 8.91e-10 | 1 |
retinal neural layer | 8.91e-10 | 1 |
presumptive neural retina | 8.91e-10 | 1 |
lower lobe of right lung | 1.36e-09 | 1 |
right lung lobe | 1.36e-09 | 1 |
lower lobe of lung | 1.36e-09 | 1 |
lobe of lung | 1.36e-09 | 1 |
right lung | 1.36e-09 | 1 |
dermis | 4.95e-09 | 9 |
dermatome | 4.95e-09 | 9 |
future dermis | 4.95e-09 | 9 |
hypodermis | 6.97e-08 | 5 |
organ component layer | 4.33e-07 | 66 |
cavity lining | 7.33e-07 | 12 |
serous membrane | 7.33e-07 | 12 |