FFCP PHASE1:Hg19::chr7:129932994..129933010,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15740 | |||
|TSSclassifier=not | |||
|UniProt=F8WF19,C9J6N7,C9J3P4,B7Z5J4,F5H0B9 | |||
|association_with_transcript=0bp_to_ENST00000470542,ENST00000473956,ENST00000474254,ENST00000490117,ENST00000492072,ENST00000493259,ENST00000497388,ENST00000538687_5end | |||
|description=CAGE_peak_1_at_CPA4_5end | |||
|id=chr7:129932994..129933010,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.28e-25!180;CL:0000548!3.42e-18!679;CL:0000004!3.42e-18!679;CL:0000255!3.42e-18!679;CL:0000220!4.26e-18!246;CL:0002321!1.94e-17!248;CL:0000012!1.98e-17!682;CL:0000192!1.63e-14!42;CL:0000514!1.63e-14!42;CL:0000183!4.12e-14!59;CL:0000680!1.35e-13!57;CL:0000056!1.35e-13!57;CL:0000355!1.35e-13!57;CL:0000144!3.70e-13!625;CL:0000222!3.77e-13!119;CL:0000187!9.15e-13!54;CL:0000066!9.53e-13!254;CL:0000359!1.58e-12!32;CL:0000057!1.72e-12!75;CL:0002371!5.93e-10!591;CL:0000393!9.43e-10!60;CL:0000211!9.43e-10!60;CL:0000077!3.02e-09!19;CL:0000003!3.53e-09!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.87e-13;32!CL:0000192;2.98e-11;43!CL:0000077;1.23e-09;19!CL:0000187;3.66e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.18e-15,43;CL:0000514,2.18e-15,43;CL:0002321,8.96e-15,250;CL:0000359,1.14e-13,32;CL:0000222,2.69e-13,121;CL:0000680,5.00e-13,58;CL:0000056,5.00e-13,58;CL:0000355,5.00e-13,58;CL:0000057,5.61e-13,76;CL:0000187,3.92e-12,55;CL:0000066,1.37e-10,253;CL:0000077,1.23e-09,19;CL:0000393,2.62e-09,61;CL:0000211,2.62e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.98e-11;43!CL:0000355;4.50e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.21e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.07e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.41e-16!143;UBERON:0003104!1.07e-14!238;UBERON:0009142!1.07e-14!238;UBERON:0000914!1.24e-13!83;UBERON:0002329!1.24e-13!83;UBERON:0003077!1.24e-13!83;UBERON:0003059!1.24e-13!83;UBERON:0007282!1.24e-13!83;UBERON:0009618!1.24e-13!83;UBERON:0007285!1.24e-13!83;UBERON:0000475!4.66e-13!365;UBERON:0000486!5.20e-13!82;UBERON:0000481!9.72e-13!347;UBERON:0002100!9.50e-12!216;UBERON:0001134!1.00e-11!61;UBERON:0002036!1.00e-11!61;UBERON:0003082!1.00e-11!61;UBERON:0004290!3.11e-11!70;UBERON:0002385!6.02e-11!63;UBERON:0001015!6.02e-11!63;UBERON:0000383!6.02e-11!63;UBERON:0003102!4.32e-09!95;UBERON:0000119!1.44e-08!312;UBERON:0001637!1.57e-08!42;UBERON:0003509!1.57e-08!42;UBERON:0004572!1.57e-08!42;UBERON:0003914!6.75e-08!118;UBERON:0000483!7.58e-08!309;UBERON:0000490!1.16e-07!138;UBERON:0002049!1.54e-07!79;UBERON:0007798!1.54e-07!79;UBERON:0001048!1.75e-07!168;UBERON:0002200!3.12e-07!11;UBERON:0006876!3.12e-07!11;UBERON:0001444!3.90e-07!48;UBERON:0007625!4.31e-07!11;UBERON:0004573!5.52e-07!33;UBERON:0004571!5.52e-07!33;UBERON:0005085!6.57e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;7.57e-08;11!UBERON:0007625;1.17e-07;11!UBERON:0010371;1.50e-07;31!UBERON:0001637;8.02e-07;42!UBERON:0003509;8.02e-07;42!UBERON:0004572;8.02e-07;42!UBERON:0001801;8.59e-07;14!UBERON:0004573;9.88e-07;33!UBERON:0004571;9.88e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.54e-12,83;UBERON:0007503,9.84e-12,78;UBERON:0001134,1.88e-11,62;UBERON:0002036,1.88e-11,62;UBERON:0003082,1.88e-11,62;UBERON:0003104,5.40e-11,160;UBERON:0009142,5.40e-11,160;UBERON:0002385,1.54e-10,64;UBERON:0001015,1.54e-10,64;UBERON:0000383,1.54e-10,64;UBERON:0002329,1.60e-10,71;UBERON:0003059,1.60e-10,71;UBERON:0007282,1.60e-10,71;UBERON:0004290,1.60e-10,71;UBERON:0009618,1.60e-10,71;UBERON:0007524,2.47e-10,73;UBERON:0005256,3.86e-10,122;UBERON:0003077,4.03e-10,72;UBERON:0007285,4.03e-10,72;UBERON:0001637,2.12e-09,42;UBERON:0003509,2.12e-09,42;UBERON:0004572,2.12e-09,42;UBERON:0003102,6.35e-09,99;UBERON:0002049,1.49e-08,78;UBERON:0007798,1.49e-08,78;UBERON:0000119,1.50e-08,309;UBERON:0003914,3.87e-08,117;UBERON:0006876,7.97e-08,11;UBERON:0000483,8.58e-08,306;UBERON:0002100,9.74e-08,199;UBERON:0007625,1.14e-07,11;UBERON:0004573,1.34e-07,33;UBERON:0004571,1.34e-07,33;UBERON:0001048,3.01e-07,160;UBERON:0000033,4.15e-07,56;UBERON:0000490,4.61e-07,148;UBERON:0005085,4.84e-07,31;UBERON:0004872,8.48e-07,83;UBERON:0001801,9.19e-07,14 | |||
|phase1_expression=0.54503513781167,1.2846031433459,0.140954404095971,2.00146596706261,0.893922188854576,5.23403114460221,0,0,0.261185628199839,2.45733936501509,2.09340350391728,0.436882744260345,2.90143676051299,26.2384668275299,40.4304798388057,18.8251041006497,27.121253761079,29.2124036154949,12.1983199697627,36.1975910745756,175.032593087569,13.7920077450359,0.85870796139317,4.10623275218653,2.76193807108566,0,0,0,0,0,0,21.1466881630153,3.614471025339,5.9160641626686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,46.9255601965756,68.311999800683,42.1123844934147,160.05540345171,0,12.6525066278685,96.2364438730211,327.937778847132,234.60671258634,0.327447688744282,66.6660377575352,57.1008041888021,0,0,0,0,0,0,0,0,0,6.21838736116411,5.87299210693868,0,1.04497483268405,0,0.35576626268671,1.00416183829401,0,0,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0.366403487860815,0,0,38.376276588543,15.9031024542502,41.1549162909884,208.014823057567,170.954625966293,24.826786753885,132.319913633584,11.7423895302675,98.1736842700297,19.6062952301853,7.40908696383284,5.39424280274414,207.813748156491,57.0414165235199,5.15507150034353,0.312160076830321,2.2818872861778,0.597794722207204,5.16711794032565,3.39933183173076,5.05622904128095,4.89970011011744,7.73856199064138,0.826606249406124,0,0,30.0353249439549,50.3032699271367,3.03005005117319,6.50616303334214,18.2862316219561,10.5354629011401,6.12975591598039,0.300476117813194,49.1161353082891,34.0840307808838,23.2777553812239,35.1806955924873,31.5095650888622,25.1448171341791,125.986224082313,61.6046794457562,16.7088568918854,6.04109431999431,15.6508940031351,26.3262710116976,176.032555875686,37.6310168067611,7.85866366175594,42.8988298545534,10.0495643644914,18.8194823207676,20.0763216772303,0,0,0,0.621966330092223,0.504641701751257,0,0,5.78916844373597,1.38134921352481,3.25057549622385,2.16563844500876,18.8107812063352,13.31819051617,18.3168382711446,19.0808572827042,22.005823853333,23.2525206728875,12.8089742752156,11.5770664423954,11.9271618653381,0,18.231430594448,51.0351774050936,64.6838330096385,0,0,0.590789906681404,0,0.860919069801795,435.953805968553,257.693670139453,14.6122279234905,7.94178882051884,11.2032018641821,3.25808305310325,0,135.671461503757,6.37617227362923,1005.48805743558,1.01056513432752,0,0,0,0,0,0.234004265139238,0,81.548435568496,343.859416423065,68.3355968708303,28.1213761286944,41.2700192689826,92.3952256788159,0,0,0.621984346622316,0,0.12624243342638,0.380987365753014,0.381988425558278,0,5.13217338068116,1.13110241973656,1.20137223137567,0,82.1920848251494,85.0122134224896,34.8356857649513,188.736705006356,0,0,10.9034627799797,13.5209667984776,117.029355289275,173.055941068399,65.8062782169766,9.15059159412144,19.5343777940919,69.9754286263653,0,11.727934308504,1.58390374586686,520.887243558965,447.096664261951,674.517771505339,0,0,0,27.556858381532,27.5668646001873,0,16.6498502667716,29.3831141247048,10.3855358679139,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,14.4775960228585,19.5066503213274,40.9610185786601,8.7347761842939,34.6152238266494,15.1394318432577,25.6539698834042,96.9046441123255,2.27407504055985,22.7640756843511,71.0721390432917,135.142600541068,8.51459421787212,21.146525005976,6.51972505240626,0,0,0,0.303127571446259,3.32870879020994,5.14063498660456,3.72161711728165,2.455391572609,2.24528075546459,2.43464383585832,5.11707249066703,6.59501076688791,16.325987308949,1.3878872442239,6.39222211127257,3.12083192852475,2.59627214591811,1.85936605535935,0.120859449591622,75.7914457746417,4.05156351317944,27.7850964558348,25.6748546889471,12.981317080983,8.57279264524082,21.6413097263405,97.2593713779301,16.0753147118587,12.6661954671451,3.4120015221269,0.340187410553031,37.3534534856701,6.16909010761157,243.038954476836,157.530588990424,9.17554582962138,29.9187363214341,34.7005869819376,0,0,8.97575437907362,102.668584104008,30.9109474931088,0.618246069886334,0.27470839445503,0.082509499920588,53.406695033644,102.70951887377,22.4957501781823,0.96670718292122,6.77813915304435,2.6095624703442,0.551346289938122,0.537101224341368,0.725083469571143,3.23861184181183,3.73934549716297,2.97512847649761,0.768760269460425,13.6545602369205,0.2023155617111,5.11330104227014,160.869109230457,2.0911118104818,20.0221827114458,76.1197623353341,5.21959795245044,14.0846406518979,93.0311763822943,101.22707646583,102.506933608867,63.6704847705575,79.0724175152022,5.13526785640705,5.72765846266686,21.9785619255784,6.29553601541602,9.88333307049797,10.7209286134575,64.9005765850344,220.329346430481,1.68503382495592,30.7209255626442,21.2030735979217,19.017026416216,22.5224853823177,8.34292048526905,5.65040583101214,6.61638412255349,90.2277006328059,173.62655056049,38.7779607958681,3.9353685122798,66.5546036437669,19.828703878384,70.9872918381248,54.4963138375396,563.4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| |||
|short_description=p1@CPA4 | |||
}} |
Revision as of 19:15, 22 January 2014
Short description: | p1@CPA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000470542, ENST00000473956, ENST00000474254, ENST00000490117, ENST00000492072, ENST00000493259, ENST00000497388, ENST00000538687_5end |
EntrezGene: | CPA4 |
HGNC: | 15740 |
UniProt: | F8WF19C9J6N7C9J3P4B7Z5J4F5H0B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.18e-15 | 43 |
smooth muscle myoblast | 2.18e-15 | 43 |
embryonic cell | 8.96e-15 | 250 |
vascular associated smooth muscle cell | 1.14e-13 | 32 |
mesodermal cell | 2.69e-13 | 121 |
muscle precursor cell | 5.00e-13 | 58 |
myoblast | 5.00e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.00e-13 | 58 |
fibroblast | 5.61e-13 | 76 |
muscle cell | 3.92e-12 | 55 |
epithelial cell | 1.37e-10 | 253 |
mesothelial cell | 1.23e-09 | 19 |
electrically responsive cell | 2.62e-09 | 61 |
electrically active cell | 2.62e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.07e-07 | 14 |