FFCP PHASE1:Hg19::chr8:27168988..27169021,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9612 | |||
|TSSclassifier=strong | |||
|UniProt=Q14289,Q6PID4 | |||
|association_with_transcript=0bp_to_ENST00000338238,ENST00000397501,ENST00000539100,ENST00000544172,NM_173174,uc003xfn.1,uc003xfo.1_5end | |||
|description=CAGE_peak_4_at_PTK2B_5end | |||
|id=chr8:27168988..27169021,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.78e-21!182;CL:0000037!4.76e-21!172;CL:0000566!4.76e-21!172;CL:0002032!1.47e-18!165;CL:0000837!1.47e-18!165;CL:0000738!7.54e-18!140;CL:0000838!8.16e-16!52;CL:0000542!1.05e-15!53;CL:0000051!1.05e-15!53;CL:0002031!1.07e-14!124;CL:0002087!7.15e-13!119;CL:0000084!5.07e-09!25;CL:0000827!5.07e-09!25;CL:0000945!2.67e-07!24;CL:0000826!2.67e-07!24;CL:0000791!5.96e-07!18;CL:0000789!5.96e-07!18;CL:0002420!5.96e-07!18;CL:0002419!5.96e-07!18;CL:0000790!5.96e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.00e-10;53!CL:0000084;6.58e-10;25!CL:0000236;4.26e-07;13!CL:0000945;4.39e-07;24!CL:0000791;7.76e-07;18!CL:0000789;7.76e-07;18!CL:0002419;7.76e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.30e-23,177;CL:0000037,7.44e-23,168;CL:0000738,1.37e-20,136;CL:0002032,7.50e-20,161;CL:0000837,7.50e-20,161;CL:0000838,7.04e-17,52;CL:0002031,8.98e-17,120;CL:0000542,3.20e-16,53;CL:0000051,3.20e-16,53;CL:0002087,4.76e-14,115;CL:0000084,6.01e-10,25;CL:0000827,6.01e-10,25;CL:0000236,1.25e-07,14;CL:0000791,2.56e-07,18;CL:0000789,2.56e-07,18;CL:0002420,2.56e-07,18;CL:0002419,2.56e-07,18;CL:0000790,2.56e-07,18;CL:0000945,2.93e-07,24;CL:0000826,2.93e-07,24;CL:0000763,7.50e-07,108;CL:0000049,7.50e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;4.00e-10;53!CL:0000790;7.76e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.66e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.00e-07;15!UBERON:0000179;4.00e-07;15!UBERON:0000463;4.00e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.71e-11,114;UBERON:0002390,2.83e-08,98;UBERON:0003061,2.83e-08,98;UBERON:0002193,2.37e-07,108;UBERON:0000178,3.90e-07,15;UBERON:0000179,3.90e-07,15;UBERON:0000463,3.90e-07,15 | |||
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| |||
|short_description=p4@PTK2B | |||
}} |
Revision as of 21:22, 22 January 2014
Short description: | p4@PTK2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTK2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338238, ENST00000397501, ENST00000539100, ENST00000544172, NM_173174, uc003xfn.1, uc003xfo.1_5end |
EntrezGene: | PTK2B |
HGNC: | 9612 |
UniProt: | Q14289Q6PID4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.30e-23 | 177 |
hematopoietic stem cell | 7.44e-23 | 168 |
leukocyte | 1.37e-20 | 136 |
hematopoietic oligopotent progenitor cell | 7.50e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.50e-20 | 161 |
lymphoid lineage restricted progenitor cell | 7.04e-17 | 52 |
hematopoietic lineage restricted progenitor cell | 8.98e-17 | 120 |
lymphocyte | 3.20e-16 | 53 |
common lymphoid progenitor | 3.20e-16 | 53 |
nongranular leukocyte | 4.76e-14 | 115 |
T cell | 6.01e-10 | 25 |
pro-T cell | 6.01e-10 | 25 |
B cell | 1.25e-07 | 14 |
mature alpha-beta T cell | 2.56e-07 | 18 |
alpha-beta T cell | 2.56e-07 | 18 |
immature T cell | 2.56e-07 | 18 |
mature T cell | 2.56e-07 | 18 |
immature alpha-beta T cell | 2.56e-07 | 18 |
lymphocyte of B lineage | 2.93e-07 | 24 |
pro-B cell | 2.93e-07 | 24 |
myeloid cell | 7.50e-07 | 108 |
common myeloid progenitor | 7.50e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.71e-11 | 114 |
hematopoietic system | 2.83e-08 | 98 |
blood island | 2.83e-08 | 98 |
hemolymphoid system | 2.37e-07 | 108 |
blood | 3.90e-07 | 15 |
haemolymphatic fluid | 3.90e-07 | 15 |
organism substance | 3.90e-07 | 15 |