FFCP PHASE1:Hg19::chr8:145642267..145642278,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55630 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17129 | |||
|TSSclassifier=strong | |||
|UniProt=Q6P5W5 | |||
|association_with_transcript=0bp_to_ENST00000301305,NM_130849,uc003zcq.2_5end | |||
|description=CAGE_peak_4_at_SLC39A4_5end | |||
|id=chr8:145642267..145642278,- | |||
|ontology_enrichment_celltype=CL:0000039!2.58e-13!7;CL:0000586!2.58e-13!7;CL:1000507!2.97e-10!12;CL:1000494!2.97e-10!12;CL:0000066!4.52e-10!254;CL:1000449!1.40e-09!16;CL:1000497!2.38e-08!18;CL:0002518!2.38e-08!18;CL:0002322!8.46e-08!5;CL:0000223!1.17e-07!59;CL:0002681!5.11e-07!13;CL:0002584!5.11e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.40e-21;10!CL:1000494;1.40e-21;10!CL:1000449;3.12e-14;15!CL:0000182;2.60e-13;12!CL:0002681;1.14e-12;12!CL:0002584;1.14e-12;12!CL:1000497;1.69e-12;17!CL:0002518;1.69e-12;17!CL:0000239;4.92e-09;3!CL:1000615;4.92e-09;3!CL:0002306;4.92e-09;3!CL:0000039;1.29e-08;7!CL:0000586;1.29e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.95e-21,10;CL:1000494,1.95e-21,10;CL:1000449,3.88e-14,15;CL:0000182,2.67e-13,12;CL:0002681,1.46e-12,12;CL:0002584,1.46e-12,12;CL:1000497,2.04e-12,17;CL:0002518,2.04e-12,17;CL:0000239,5.35e-09,3;CL:1000615,5.35e-09,3;CL:0002306,5.35e-09,3;CL:0000039,1.17e-08,7;CL:0000586,1.17e-08,7;CL:0000066,1.61e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.61e-12;31!UBERON:0004161;9.70e-10;11!UBERON:0009497;2.98e-08;13!UBERON:0001041;2.32e-07;30 | |||
|ontology_enrichment_disease=DOID:305!4.82e-09!106;DOID:3095!1.23e-07!22;DOID:2994!1.23e-07!22;DOID:0050687!4.05e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.09e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000466!5.15e-14!126;UBERON:0005177!3.43e-13!107;UBERON:0005172!4.73e-13!55;UBERON:0005173!4.73e-13!55;UBERON:0000160!1.92e-11!27;UBERON:0004119!1.99e-11!169;UBERON:0000925!1.99e-11!169;UBERON:0006595!1.99e-11!169;UBERON:0002417!2.82e-11!61;UBERON:0000916!2.82e-11!61;UBERON:0009569!4.62e-11!113;UBERON:0005911!5.41e-11!82;UBERON:0009773!2.97e-10!12;UBERON:0001231!2.97e-10!12;UBERON:0004810!2.97e-10!12;UBERON:0000464!4.22e-10!104;UBERON:0002113!6.66e-10!27;UBERON:0003918!6.66e-10!27;UBERON:0005095!6.66e-10!27;UBERON:0007687!6.66e-10!27;UBERON:0005409!8.18e-10!35;UBERON:0001007!8.57e-10!155;UBERON:0001555!8.57e-10!155;UBERON:0007026!8.57e-10!155;UBERON:0004211!1.40e-09!16;UBERON:0001285!1.40e-09!16;UBERON:0007684!1.40e-09!16;UBERON:0003220!1.40e-09!16;UBERON:0004208!1.40e-09!16;UBERON:0004921!1.45e-09!129;UBERON:0004185!1.45e-09!129;UBERON:0006555!6.29e-09!17;UBERON:0005103!6.29e-09!17;UBERON:0000083!6.29e-09!17;UBERON:0009201!6.29e-09!17;UBERON:0004819!6.29e-09!17;UBERON:0006553!6.29e-09!17;UBERON:0003074!6.29e-09!17;UBERON:0003060!6.29e-09!17;UBERON:0009856!1.40e-08!26;UBERON:0000058!1.60e-08!26;UBERON:0000059!2.12e-08!11;UBERON:0000080!2.38e-08!18;UBERON:0002120!2.38e-08!18;UBERON:0004875!2.38e-08!18;UBERON:0005721!2.38e-08!18;UBERON:0005754!2.38e-08!18;UBERON:0007297!2.38e-08!18;UBERON:0000489!5.68e-08!32;UBERON:0001155!2.14e-07!9;UBERON:0007499!2.25e-07!25;UBERON:0004876!2.28e-07!20;UBERON:0006554!2.30e-07!44;UBERON:0009497!2.43e-07!25;UBERON:0000015!2.43e-07!25;UBERON:0002423!2.43e-07!25;UBERON:0006235!2.43e-07!25;UBERON:0004161!2.43e-07!25;UBERON:0001008!3.88e-07!45;UBERON:0001225!5.11e-07!13;UBERON:0008987!5.11e-07!13;UBERON:0003887!6.00e-07!21;UBERON:0003886!6.74e-07!63;UBERON:0000077!7.18e-07!130;UBERON:0002553!9.81e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.40e-21;10!UBERON:0009773;1.40e-21;10!UBERON:0001231;1.40e-21;10!UBERON:0004810;1.40e-21;10!UBERON:0000160;2.59e-21;17!UBERON:0002113;3.22e-19;24!UBERON:0011143;3.22e-19;24!UBERON:0005409;1.97e-16;22!UBERON:0000489;1.16e-15;29!UBERON:0005172;1.33e-15;52!UBERON:0005173;1.33e-15;52!UBERON:0006554;4.29e-15;30!UBERON:0001008;4.29e-15;30!UBERON:0006555;3.12e-14;15!UBERON:0004819;3.12e-14;15!UBERON:0001285;3.12e-14;15!UBERON:0007684;3.12e-14;15!UBERON:0002417;1.96e-13;58!UBERON:0000916;1.96e-13;58!UBERON:0001225;1.14e-12;12!UBERON:0008987;1.14e-12;12!UBERON:0002108;3.58e-12;4!UBERON:0002423;1.07e-11;25!UBERON:0004921;3.85e-10;33!UBERON:0001851;4.24e-10;15!UBERON:0000353;4.24e-10;15!UBERON:0000059;2.19e-09;11!UBERON:0006853;4.92e-09;3!UBERON:0007685;4.92e-09;3!UBERON:0004134;4.92e-09;3!UBERON:0002107;2.55e-08;19!UBERON:0006925;2.55e-08;19!UBERON:0005177;1.15e-07;99!UBERON:0000473;1.35e-07;8!UBERON:0004913;2.17e-07;1!UBERON:0003703;2.17e-07;1!UBERON:0001174;2.17e-07;1!UBERON:0004914;2.17e-07;1!UBERON:0001155;6.12e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.44e-23,54;UBERON:0005173,6.44e-23,54;UBERON:0004810,1.95e-21,10;UBERON:0000160,2.23e-21,17;UBERON:0002417,2.53e-20,60;UBERON:0000916,2.53e-20,60;UBERON:0002113,1.32e-17,26;UBERON:0003918,1.32e-17,26;UBERON:0011143,1.32e-17,26;UBERON:0005095,1.32e-17,26;UBERON:0007687,1.32e-17,26;UBERON:0000489,1.54e-14,31;UBERON:0005177,1.86e-14,101;UBERON:0005409,1.90e-14,25;UBERON:0004211,3.88e-14,15;UBERON:0009773,3.88e-14,15;UBERON:0001231,3.88e-14,15;UBERON:0001285,3.88e-14,15;UBERON:0007684,3.88e-14,15;UBERON:0004208,3.88e-14,15;UBERON:0006555,3.18e-13,16;UBERON:0004819,3.18e-13,16;UBERON:0009569,1.07e-12,112;UBERON:0001225,1.46e-12,12;UBERON:0008987,1.46e-12,12;UBERON:0002108,3.32e-12,4;UBERON:0007499,9.78e-12,25;UBERON:0009497,1.03e-11,25;UBERON:0000015,1.03e-11,25;UBERON:0002423,1.03e-11,25;UBERON:0006235,1.03e-11,25;UBERON:0004161,1.03e-11,25;UBERON:0009856,2.99e-11,26;UBERON:0006554,3.01e-11,47;UBERON:0001008,5.60e-11,48;UBERON:0001851,5.16e-10,15;UBERON:0000353,5.16e-10,15;UBERON:0008835,5.93e-10,22;UBERON:0003894,5.93e-10,22;UBERON:0009854,1.70e-09,23;UBERON:0000059,2.22e-09,11;UBERON:0004921,4.89e-09,118;UBERON:0006853,5.35e-09,3;UBERON:0007685,5.35e-09,3;UBERON:0004134,5.35e-09,3;UBERON:0002107,2.60e-08,19;UBERON:0006925,2.60e-08,19;UBERON:0008836,2.60e-08,19;UBERON:0001007,6.07e-08,145;UBERON:0001555,6.07e-08,145;UBERON:0007026,6.07e-08,145;UBERON:0004119,6.08e-08,160;UBERON:0000925,6.08e-08,160;UBERON:0006595,6.08e-08,160;UBERON:0003104,9.11e-08,160;UBERON:0009142,9.11e-08,160;UBERON:0003914,1.03e-07,117;UBERON:0000473,1.25e-07,8;UBERON:0004913,1.91e-07,1;UBERON:0003703,1.91e-07,1;UBERON:0001174,1.91e-07,1;UBERON:0004914,1.91e-07,1;UBERON:0001155,6.18e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,2.62129646556207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,2.25599806453706,1.00119938235739,1.56869953835371,0,0.422206515571503,0,0,0,0,0,2.00675909541941,1.01950509218015,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15313141053959,14.1832609060762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.565412285735763,0,3.98104772431402,20.610612529278,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71547627196126,0,0.640358984218058,0,0,0,0,0,0.99402028452346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,3.49487848582361,9.29641551225239,9.31299199707181,9.57130322729425,0,0,0,0,0,0.137539436597234,0,0,0,0,0,1.81253126788156,2.7800931711549,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.640724475406168,0,0.414239055347196,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,1.6264169483875,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,1.40136081656895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0.98150233615243,3.53561982448581,0,0,0,0,0,0,0,0,0,0.301925687133347,18.5217979459067,6.33822725461476,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,3.3656313814854,1.87052183685892,2.11358268930143,0,0,0,0,0,0.213233981900981,0,0,0,0,0.509177266225319,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SLC39A4 | |||
}} |
Revision as of 00:28, 23 January 2014
Short description: | p4@SLC39A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC39A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000301305, NM_130849, uc003zcq.2_5end |
EntrezGene: | SLC39A4 |
HGNC: | 17129 |
UniProt: | Q6P5W5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.95e-21 | 10 |
nephron tubule epithelial cell | 1.95e-21 | 10 |
epithelial cell of nephron | 3.88e-14 | 15 |
hepatocyte | 2.67e-13 | 12 |
kidney cortical cell | 1.46e-12 | 12 |
renal cortical epithelial cell | 1.46e-12 | 12 |
kidney cell | 2.04e-12 | 17 |
kidney epithelial cell | 2.04e-12 | 17 |
brush border epithelial cell | 5.35e-09 | 3 |
kidney cortex tubule cell | 5.35e-09 | 3 |
epithelial cell of proximal tubule | 5.35e-09 | 3 |
germ line cell | 1.17e-08 | 7 |
germ cell | 1.17e-08 | 7 |
epithelial cell | 1.61e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.09e-07 | 106 |