FFCP PHASE1:Hg19::chr9:71735910..71735923,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9414 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11828 | |||
|TSSclassifier=weak | |||
|UniProt=B7Z2R3 | |||
|association_with_transcript=-256bp_to_NM_001170414_5end | |||
|coexpression_cluster_id=C4826 | |||
|description=CAGE_peak_16_at_TJP2_5end | |||
|id=chr9:71735910..71735923,+ | |||
|ontology_enrichment_celltype=CL:1000449!8.87e-17!16;CL:0000066!1.20e-16!254;CL:1000507!1.46e-16!12;CL:1000494!1.46e-16!12;CL:1000497!1.56e-14!18;CL:0002518!1.56e-14!18;CL:0002681!1.04e-11!13;CL:0002584!1.04e-11!13;CL:0002322!9.66e-09!5;CL:0000239!2.12e-07!3;CL:1000615!2.12e-07!3;CL:0002306!2.12e-07!3;CL:0000039!4.01e-07!7;CL:0000586!4.01e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.39e-52;10!CL:1000494;3.39e-52;10!CL:1000449;3.29e-41;15!CL:1000497;4.12e-36;17!CL:0002518;4.12e-36;17!CL:0002681;1.81e-27;12!CL:0002584;1.81e-27;12!CL:0000239;3.86e-17;3!CL:1000615;3.86e-17;3!CL:0002306;3.86e-17;3!CL:0000039;1.84e-12;7!CL:0000586;1.84e-12;7!CL:0000650;3.01e-12;2!CL:1000500;3.01e-12;2!CL:1000618;3.01e-12;2!CL:1001318;3.01e-12;2!CL:0002173;3.01e-12;2!CL:1000746;1.53e-07;7!CL:1000612;1.53e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.69e-52,10;CL:1000494,2.69e-52,10;CL:1000449,3.59e-41,15;CL:1000497,4.44e-36,17;CL:0002518,4.44e-36,17;CL:0002681,2.09e-27,12;CL:0002584,2.09e-27,12;CL:0000239,3.38e-17,3;CL:1000615,3.38e-17,3;CL:0002306,3.38e-17,3;CL:0000039,2.30e-12,7;CL:0000586,2.30e-12,7;CL:0000650,3.01e-12,2;CL:1000500,3.01e-12,2;CL:1000618,3.01e-12,2;CL:1001318,3.01e-12,2;CL:0002173,3.01e-12,2;CL:0000066,1.12e-11,253;CL:1000746,1.78e-07,7;CL:1000612,1.78e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.09e-13;10!UBERON:0005564;4.09e-13;10!UBERON:0003104;7.42e-08;31 | |||
|ontology_enrichment_disease=DOID:305!4.31e-14!106;DOID:299!1.13e-10!25;DOID:0050687!3.08e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.22e-11;2!DOID:299;2.09e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.75e-11,2;DOID:299,1.94e-09,25;DOID:305,4.22e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004211!8.87e-17!16;UBERON:0001285!8.87e-17!16;UBERON:0007684!8.87e-17!16;UBERON:0003220!8.87e-17!16;UBERON:0004208!8.87e-17!16;UBERON:0009773!1.46e-16!12;UBERON:0001231!1.46e-16!12;UBERON:0004810!1.46e-16!12;UBERON:0000058!2.99e-16!26;UBERON:0006555!1.37e-15!17;UBERON:0005103!1.37e-15!17;UBERON:0000083!1.37e-15!17;UBERON:0009201!1.37e-15!17;UBERON:0004819!1.37e-15!17;UBERON:0006553!1.37e-15!17;UBERON:0003074!1.37e-15!17;UBERON:0003060!1.37e-15!17;UBERON:0000080!1.56e-14!18;UBERON:0002120!1.56e-14!18;UBERON:0004875!1.56e-14!18;UBERON:0005721!1.56e-14!18;UBERON:0005754!1.56e-14!18;UBERON:0007297!1.56e-14!18;UBERON:0006554!2.24e-14!44;UBERON:0000489!4.17e-14!32;UBERON:0001008!6.40e-14!45;UBERON:0003887!8.40e-14!21;UBERON:0002113!9.25e-14!27;UBERON:0003918!9.25e-14!27;UBERON:0005095!9.25e-14!27;UBERON:0007687!9.25e-14!27;UBERON:0003064!6.28e-13!37;UBERON:0004876!9.62e-13!20;UBERON:0005172!7.69e-12!55;UBERON:0005173!7.69e-12!55;UBERON:0001225!1.04e-11!13;UBERON:0008987!1.04e-11!13;UBERON:0003886!1.68e-11!63;UBERON:0000466!1.71e-11!126;UBERON:0002553!1.10e-10!70;UBERON:0002417!4.55e-10!61;UBERON:0000916!4.55e-10!61;UBERON:0004921!1.65e-09!129;UBERON:0004185!1.65e-09!129;UBERON:0001851!4.16e-09!16;UBERON:0005409!6.77e-09!35;UBERON:0001007!8.39e-09!155;UBERON:0001555!8.39e-09!155;UBERON:0007026!8.39e-09!155;UBERON:0000464!1.90e-08!104;UBERON:0000353!1.90e-08!17;UBERON:0004119!2.10e-08!169;UBERON:0000925!2.10e-08!169;UBERON:0006595!2.10e-08!169;UBERON:0005177!3.73e-08!107;UBERON:0000160!6.08e-08!27;UBERON:0006853!2.12e-07!3;UBERON:0007685!2.12e-07!3;UBERON:0004134!2.12e-07!3;UBERON:0003101!8.74e-07!22;UBERON:0000079!8.74e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.39e-52;10!UBERON:0009773;3.39e-52;10!UBERON:0001231;3.39e-52;10!UBERON:0004810;3.39e-52;10!UBERON:0006555;3.29e-41;15!UBERON:0004819;3.29e-41;15!UBERON:0001285;3.29e-41;15!UBERON:0007684;3.29e-41;15!UBERON:0002113;4.57e-35;24!UBERON:0011143;4.57e-35;24!UBERON:0000489;1.50e-28;29!UBERON:0006554;1.65e-27;30!UBERON:0001008;1.65e-27;30!UBERON:0001225;1.81e-27;12!UBERON:0008987;1.81e-27;12!UBERON:0001851;9.78e-22;15!UBERON:0000353;9.78e-22;15!UBERON:0000160;2.11e-17;17!UBERON:0006853;3.86e-17;3!UBERON:0007685;3.86e-17;3!UBERON:0004134;3.86e-17;3!UBERON:0005409;7.56e-17;22!UBERON:0005172;5.72e-15;52!UBERON:0005173;5.72e-15;52!UBERON:0003567;3.01e-12;2!UBERON:0003838;3.01e-12;2!UBERON:0003586;3.01e-12;2!UBERON:0005169;3.01e-12;2!UBERON:0002321;3.01e-12;2!UBERON:0005215;3.01e-12;2!UBERON:0002303;3.01e-12;2!UBERON:0002319;3.01e-12;2!UBERON:0000059;1.31e-11;11!UBERON:0000473;6.42e-11;8!UBERON:0002417;1.05e-10;58!UBERON:0000916;1.05e-10;58!UBERON:0004921;2.51e-10;33!UBERON:0004907;5.56e-10;5!UBERON:0001155;2.74e-09;9!UBERON:0003101;4.29e-08;22!UBERON:0000079;4.29e-08;22!UBERON:0003135;5.79e-08;11!UBERON:0000074;1.53e-07;7!UBERON:0001229;1.53e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.69e-52,10;UBERON:0004211,3.59e-41,15;UBERON:0009773,3.59e-41,15;UBERON:0001231,3.59e-41,15;UBERON:0001285,3.59e-41,15;UBERON:0007684,3.59e-41,15;UBERON:0004208,3.59e-41,15;UBERON:0006555,1.82e-38,16;UBERON:0004819,1.82e-38,16;UBERON:0002113,4.23e-32,26;UBERON:0003918,4.23e-32,26;UBERON:0011143,4.23e-32,26;UBERON:0005095,4.23e-32,26;UBERON:0007687,4.23e-32,26;UBERON:0001225,2.09e-27,12;UBERON:0008987,2.09e-27,12;UBERON:0000489,1.75e-26,31;UBERON:0006554,3.49e-22,47;UBERON:0005172,3.66e-22,54;UBERON:0005173,3.66e-22,54;UBERON:0001851,1.10e-21,15;UBERON:0000353,1.10e-21,15;UBERON:0001008,1.18e-21,48;UBERON:0002417,1.36e-19,60;UBERON:0000916,1.36e-19,60;UBERON:0000160,1.56e-17,17;UBERON:0006853,3.38e-17,3;UBERON:0007685,3.38e-17,3;UBERON:0004134,3.38e-17,3;UBERON:0005409,7.52e-15,25;UBERON:0003567,3.01e-12,2;UBERON:0003838,3.01e-12,2;UBERON:0003586,3.01e-12,2;UBERON:0005169,3.01e-12,2;UBERON:0002321,3.01e-12,2;UBERON:0005215,3.01e-12,2;UBERON:0002303,3.01e-12,2;UBERON:0002319,3.01e-12,2;UBERON:0000059,1.04e-11,11;UBERON:0005177,1.13e-11,101;UBERON:0000473,7.81e-11,8;UBERON:0003103,1.30e-10,68;UBERON:0003104,3.87e-10,160;UBERON:0009142,3.87e-10,160;UBERON:0004907,3.95e-10,5;UBERON:0001155,2.40e-09,9;UBERON:0009569,6.77e-09,112;UBERON:0003101,4.93e-08,22;UBERON:0000079,4.93e-08,22;UBERON:0003135,6.66e-08,11;UBERON:0010532,1.78e-07,7;UBERON:0000074,1.78e-07,7;UBERON:0001229,1.78e-07,7;UBERON:0001230,1.78e-07,7;UBERON:0003220,1.78e-07,7;UBERON:0005749,1.78e-07,7;UBERON:0004199,1.78e-07,7;UBERON:0004209,1.78e-07,7;UBERON:0004198,1.78e-07,7;UBERON:0003914,3.29e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,1.35359883872224,1.46329140498388,2.35304930753057,4.38417673959782,1.58327443339314,1.13733384070897,0,0.215915916102139,0,3.79325012561394,3.01013864312912,2.54876273045038,3.3243040357149,2.46262230194396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23993513143015,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,1.83758992864123,0,0.995261931078505,1.06149077404007,1.83309043480088,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,2.41981432097328,0,0.063186579628488,0,0.103688191397247,0,0,0,0,2.56148591426813,0,0.520679215005393,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0.432271251462318,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,7.40561913687902,4.94495150286999,7.88621463093963,0.196854963029498,0,0,0,0.482259445395058,0.550157746388935,0.83088067605837,0,0,0.0607495566580247,0,1.33969702408637,3.77673034571986,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,1.00108261702862,0.156986185701028,0,2.80272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,1.34226518157351,1.47225350422864,1.46301509978723,0,0,0,0,0,0,0,0,0,0,2.08370226891451,2.40415516554353,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0.481448200135009,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,2.03977659483963,2.13773924212448,2.84874188558019,1.25353769646188,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0.0673520530145875,0,0,0.407016343054873,0,0,1.16772762738563,0,0.122241444182866,0,0,0,0 | |||
|short_description=p16@TJP2 | |||
}} |
Revision as of 01:35, 23 January 2014
Short description: | p16@TJP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TJP2_5end |
Coexpression cluster: | C4826_hepatocellular_Renal_kidney_adenocarcinoma_Intestinal_small_Prostate |
Association with transcript: | -256bp_to_NM_001170414_5end |
EntrezGene: | TJP2 |
HGNC: | 11828 |
UniProt: | B7Z2R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.69e-52 | 10 |
nephron tubule epithelial cell | 2.69e-52 | 10 |
epithelial cell of nephron | 3.59e-41 | 15 |
kidney cell | 4.44e-36 | 17 |
kidney epithelial cell | 4.44e-36 | 17 |
kidney cortical cell | 2.09e-27 | 12 |
renal cortical epithelial cell | 2.09e-27 | 12 |
brush border epithelial cell | 3.38e-17 | 3 |
kidney cortex tubule cell | 3.38e-17 | 3 |
epithelial cell of proximal tubule | 3.38e-17 | 3 |
germ line cell | 2.30e-12 | 7 |
germ cell | 2.30e-12 | 7 |
mesangial cell | 3.01e-12 | 2 |
kidney interstitial cell | 3.01e-12 | 2 |
juxtaglomerular complex cell | 3.01e-12 | 2 |
renal interstitial pericyte | 3.01e-12 | 2 |
extraglomerular mesangial cell | 3.01e-12 | 2 |
epithelial cell | 1.12e-11 | 253 |
glomerular cell | 1.78e-07 | 7 |
kidney corpuscule cell | 1.78e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.75e-11 | 2 |
adenocarcinoma | 1.94e-09 | 25 |
carcinoma | 4.22e-08 | 106 |