FFCP PHASE1:Hg19::chr9:126692219..126692274,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57706 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29324 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TEH3 | |||
|association_with_transcript=111bp_to_ENST00000373624_5end | |||
|description=CAGE_peak_2_at_DENND1A_5end | |||
|id=chr9:126692219..126692274,- | |||
|ontology_enrichment_celltype=CL:0000766!4.90e-28!76;CL:0002194!1.33e-26!63;CL:0000576!1.33e-26!63;CL:0000040!1.33e-26!63;CL:0000559!1.33e-26!63;CL:0000763!1.94e-26!112;CL:0000049!1.94e-26!112;CL:0000860!5.69e-25!45;CL:0002009!8.53e-25!65;CL:0000839!1.54e-24!70;CL:0000557!5.25e-24!71;CL:0002057!1.30e-23!42;CL:0000988!7.44e-21!182;CL:0000037!2.63e-20!172;CL:0000566!2.63e-20!172;CL:0002032!1.04e-19!165;CL:0000837!1.04e-19!165;CL:0000738!4.08e-19!140;CL:0002087!1.41e-17!119;CL:0000134!2.15e-15!358;CL:0002320!8.15e-15!365;CL:0002031!1.47e-14!124;CL:0000048!7.76e-14!430;CL:0000723!4.27e-12!436;CL:0000034!6.96e-12!444;CL:0000219!3.90e-11!390;CL:0002393!6.20e-07!9;CL:0002397!6.20e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.16e-17;48!CL:0000860;9.77e-17;33!CL:0002057;9.77e-17;33!CL:0000473;4.16e-15;39!CL:0000234;4.16e-15;39!CL:0000766;1.25e-12;69!CL:0000763;1.92e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.48e-27,72;CL:0002194,5.53e-26,59;CL:0000576,5.53e-26,59;CL:0000040,5.53e-26,59;CL:0000559,5.53e-26,59;CL:0000763,1.36e-25,108;CL:0000049,1.36e-25,108;CL:0002009,3.95e-24,61;CL:0000473,5.34e-24,48;CL:0000234,5.34e-24,48;CL:0000839,7.78e-24,66;CL:0000860,1.28e-23,42;CL:0002057,1.28e-23,42;CL:0000557,2.73e-23,67;CL:0000988,4.10e-20,177;CL:0000037,2.01e-19,168;CL:0002032,7.82e-19,161;CL:0000837,7.82e-19,161;CL:0000738,3.00e-18,136;CL:0002087,9.99e-17,115;CL:0000134,1.65e-14,354;CL:0002320,6.01e-14,361;CL:0002031,9.38e-14,120;CL:0000048,6.43e-13,427;CL:0000723,3.26e-11,433;CL:0000034,5.23e-11,441;CL:0000219,1.85e-10,386;CL:0002393,6.17e-07,9;CL:0002397,6.17e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-17;42!CL:0000049;1.48e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.20e-25!112;UBERON:0002405!5.18e-25!115;UBERON:0002390!5.54e-25!102;UBERON:0003061!5.54e-25!102;UBERON:0002371!3.75e-22!80;UBERON:0001474!5.28e-21!86;UBERON:0004765!1.91e-18!101;UBERON:0001434!1.91e-18!101;UBERON:0003081!4.47e-15!216;UBERON:0002384!1.38e-14!375;UBERON:0002204!1.25e-13!167;UBERON:0000479!5.68e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.31e-25,108;UBERON:0002390,3.67e-24,98;UBERON:0003061,3.67e-24,98;UBERON:0002405,2.30e-22,93;UBERON:0002371,2.20e-21,76;UBERON:0001474,3.24e-20,82;UBERON:0001434,7.30e-17,100;UBERON:0004765,1.15e-16,90;UBERON:0003081,2.06e-14,203;UBERON:0002384,9.60e-14,371;UBERON:0002204,2.34e-12,167;UBERON:0000926,2.81e-09,315;UBERON:0004120,2.81e-09,315;UBERON:0006603,2.81e-09,315;UBERON:0000479,9.68e-07,773 | |||
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| |||
|short_description=p2@DENND1A | |||
}} |
Revision as of 03:13, 23 January 2014
Short description: | p2@DENND1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DENND1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 111bp_to_ENST00000373624_5end |
EntrezGene: | DENND1A |
HGNC: | 29324 |
UniProt: | Q8TEH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.48e-27 | 72 |
monopoietic cell | 5.53e-26 | 59 |
monocyte | 5.53e-26 | 59 |
monoblast | 5.53e-26 | 59 |
promonocyte | 5.53e-26 | 59 |
myeloid cell | 1.36e-25 | 108 |
common myeloid progenitor | 1.36e-25 | 108 |
macrophage dendritic cell progenitor | 3.95e-24 | 61 |
defensive cell | 5.34e-24 | 48 |
phagocyte | 5.34e-24 | 48 |
myeloid lineage restricted progenitor cell | 7.78e-24 | 66 |
classical monocyte | 1.28e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-23 | 42 |
granulocyte monocyte progenitor cell | 2.73e-23 | 67 |
hematopoietic cell | 4.10e-20 | 177 |
hematopoietic stem cell | 2.01e-19 | 168 |
hematopoietic oligopotent progenitor cell | 7.82e-19 | 161 |
hematopoietic multipotent progenitor cell | 7.82e-19 | 161 |
leukocyte | 3.00e-18 | 136 |
nongranular leukocyte | 9.99e-17 | 115 |
mesenchymal cell | 1.65e-14 | 354 |
connective tissue cell | 6.01e-14 | 361 |
hematopoietic lineage restricted progenitor cell | 9.38e-14 | 120 |
multi fate stem cell | 6.43e-13 | 427 |
somatic stem cell | 3.26e-11 | 433 |
stem cell | 5.23e-11 | 441 |
motile cell | 1.85e-10 | 386 |
intermediate monocyte | 6.17e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.17e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.31e-25 | 108 |
hematopoietic system | 3.67e-24 | 98 |
blood island | 3.67e-24 | 98 |
immune system | 2.30e-22 | 93 |
bone marrow | 2.20e-21 | 76 |
bone element | 3.24e-20 | 82 |
skeletal system | 7.30e-17 | 100 |
skeletal element | 1.15e-16 | 90 |
lateral plate mesoderm | 2.06e-14 | 203 |
connective tissue | 9.60e-14 | 371 |
musculoskeletal system | 2.34e-12 | 167 |
mesoderm | 2.81e-09 | 315 |
mesoderm-derived structure | 2.81e-09 | 315 |
presumptive mesoderm | 2.81e-09 | 315 |
tissue | 9.68e-07 | 773 |