FFCP PHASE1:Hg19::chrX:86773039..86773065,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=142bp_to_AB385497_5end | |||
|description=CAGE_peak_2_at_AB385497_5end | |||
|id=chrX:86773039..86773065,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.92e-21!24;CL:0000071!1.44e-16!18;CL:0002546!1.44e-16!18;CL:0000115!3.18e-15!35;CL:0000213!5.00e-14!57;CL:0000215!5.00e-14!57;CL:0000222!1.22e-13!119;CL:0002078!3.70e-12!44;CL:0002321!3.53e-11!248;CL:0000220!1.21e-10!246;CL:1000413!3.10e-09!9;CL:0002543!6.90e-07!6;CL:0002494!7.36e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.73e-43;24!CL:0000071;3.82e-35;18!CL:0000115;7.17e-30;36!CL:0002078;1.45e-21;45!CL:1000413;1.22e-20;9!CL:0002543;1.40e-14;6!CL:0000213;1.75e-14;58!CL:0000215;1.75e-14;58!CL:0002548;3.10e-14;6!CL:0002544;4.73e-14;6!CL:0002138;8.49e-10;6!CL:0002494;1.18e-08;16!CL:0002618;1.19e-08;3!CL:0000064;1.19e-07;3!CL:0000067;1.19e-07;3!CL:0005012;1.19e-07;3!CL:0002304;1.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.80e-43,24;CL:0000071,2.21e-35,18;CL:0002546,2.21e-35,18;CL:0000115,5.11e-35,36;CL:0002078,1.76e-31,45;CL:0000213,1.07e-22,58;CL:0000215,1.07e-22,58;CL:1000413,9.35e-21,9;CL:0002543,6.76e-15,6;CL:0000222,1.79e-14,121;CL:0002544,3.17e-14,6;CL:0002548,3.33e-14,6;CL:0005020,9.41e-10,6;CL:0002138,9.41e-10,6;CL:0005022,9.41e-10,6;CL:0000076,5.32e-09,63;CL:0002618,1.15e-08,3;CL:0002494,1.21e-08,16;CL:0002321,1.74e-08,250;CL:0000064,8.05e-08,3;CL:0000067,8.05e-08,3;CL:0005012,8.05e-08,3;CL:0002304,8.05e-08,3;CL:0000066,8.83e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;3.82e-35;18!CL:0005022;8.49e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.73e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.06e-18!84;UBERON:0002049!9.56e-17!79;UBERON:0007798!9.56e-17!79;UBERON:0001986!1.44e-16!18;UBERON:0004638!1.44e-16!18;UBERON:0004852!1.44e-16!18;UBERON:0004535!2.67e-16!110;UBERON:0001009!2.87e-15!113;UBERON:0000487!8.28e-15!22;UBERON:0000477!1.37e-14!286;UBERON:0000119!5.52e-14!312;UBERON:0000025!1.46e-13!194;UBERON:0006914!1.48e-13!25;UBERON:0000483!2.15e-13!309;UBERON:0000055!4.15e-13!69;UBERON:0003914!1.04e-12!118;UBERON:0004111!1.77e-12!241;UBERON:0001981!5.28e-11!60;UBERON:0007500!5.28e-11!60;UBERON:0004537!5.28e-11!60;UBERON:0006965!5.28e-11!60;UBERON:0000490!1.64e-09!138;UBERON:0003915!3.10e-09!9;UBERON:0004700!3.10e-09!9;UBERON:0001917!3.10e-09!9;UBERON:0000922!8.10e-08!612;UBERON:0001017!8.98e-08!82;UBERON:0005743!3.27e-07!86;UBERON:0000073!8.93e-07!94;UBERON:0001016!8.93e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.82e-35;18!UBERON:0001986;3.82e-35;18!UBERON:0004852;3.82e-35;18!UBERON:0000487;7.31e-28;22!UBERON:0006914;7.57e-27;25!UBERON:0000490;1.77e-21;33!UBERON:0003915;1.22e-20;9!UBERON:0004700;1.22e-20;9!UBERON:0001917;1.22e-20;9!UBERON:0002049;3.79e-13;75!UBERON:0007798;3.79e-13;75!UBERON:0001638;1.09e-12;9!UBERON:0003920;1.09e-12;9!UBERON:0004582;1.09e-12;9!UBERON:0000055;8.69e-12;65!UBERON:0004535;1.28e-10;109!UBERON:0000488;5.88e-10;4!UBERON:0007500;7.79e-10;56!UBERON:0001981;7.79e-10;56!UBERON:0004537;7.79e-10;56!UBERON:0007625;1.16e-09;11!UBERON:0001801;1.94e-09;14!UBERON:0001009;3.77e-09;112!UBERON:0002066;1.44e-08;5!UBERON:0000992;5.32e-08;13!UBERON:0001637;8.88e-08;42!UBERON:0003509;8.88e-08;42!UBERON:0004572;8.88e-08;42!UBERON:0001778;1.19e-07;3!UBERON:0001775;1.19e-07;3!UBERON:0000947;1.84e-07;21!UBERON:0010191;1.84e-07;21!UBERON:0003914;1.88e-07;74!UBERON:0001473;3.05e-07;8!UBERON:0004536;3.05e-07;8!UBERON:0006558;3.05e-07;8!UBERON:0006876;3.40e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.21e-35,18;UBERON:0001986,2.21e-35,18;UBERON:0004852,2.21e-35,18;UBERON:0004535,3.63e-29,109;UBERON:0001009,4.66e-28,112;UBERON:0000487,4.71e-28,22;UBERON:0002049,6.36e-28,78;UBERON:0007798,6.36e-28,78;UBERON:0006914,5.58e-27,25;UBERON:0004872,1.26e-22,83;UBERON:0000055,1.40e-21,68;UBERON:0003915,9.35e-21,9;UBERON:0004700,9.35e-21,9;UBERON:0001917,9.35e-21,9;UBERON:0007500,6.80e-17,59;UBERON:0001981,6.80e-17,59;UBERON:0004537,6.80e-17,59;UBERON:0006965,6.80e-17,59;UBERON:0003914,1.50e-16,117;UBERON:0001638,6.88e-13,9;UBERON:0003920,6.88e-13,9;UBERON:0004582,6.88e-13,9;UBERON:0000488,4.31e-10,4;UBERON:0007625,1.03e-09,11;UBERON:0001801,2.20e-09,14;UBERON:0002066,1.55e-08,5;UBERON:0000992,4.17e-08,13;UBERON:0000490,7.29e-08,148;UBERON:0001778,8.05e-08,3;UBERON:0001775,8.05e-08,3;UBERON:0001637,8.46e-08,42;UBERON:0003509,8.46e-08,42;UBERON:0004572,8.46e-08,42;UBERON:0000947,1.96e-07,21;UBERON:0010191,1.96e-07,21;UBERON:0006876,2.81e-07,11;UBERON:0001473,3.28e-07,8;UBERON:0004536,3.28e-07,8;UBERON:0006558,3.28e-07,8;UBERON:0000025,4.46e-07,192;UBERON:0003081,7.21e-07,203;UBERON:0000948,8.57e-07,24;UBERON:0005498,8.57e-07,24;UBERON:0004140,8.57e-07,24;UBERON:0009881,8.57e-07,24;UBERON:0004141,8.57e-07,24;UBERON:0003084,8.57e-07,24;UBERON:0007005,8.57e-07,24;UBERON:0004139,8.57e-07,24;UBERON:0004291,8.57e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.52908960491121,0.263766978228454,0.37129905888014,0,0,1.20538905604795,0,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.38981203585091,3.58015173161885,0,0,0,0,0,2.26883561193763,2.4390233720882,1.75669571386252,0.130979075497713,0,0,0,0,0,0,0,0,6.95668425783468,1.72046919021225,4.51282652089873,4.52246353539208,2.09749718104953,4.40188867104108,3.34391946458897,2.58416759169329,2.49036383880697,2.34304428935269,2.01414658554573,0.760272105718513,1.22031028774085,1.10298924103761,1.62028389576352,8.75137337183982,4.26605807989723,3.94140181691628,1.53316637465883,1.89853131913626,5.67925406184263,0,0,0,0,0.633152558322899,0.529636723252875,1.14734648299525,3.19201543978521,1.68203280042692,1.06748995729705,1.48000529050296,6.22422070799533,5.52313755485721,7.68270944633256,0.454072282934794,2.30470369792,0,0,1.1409436430889,0,0.352303495931295,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,9.64173556860179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.243947412259191,0.927708378250397,1.39432731443422,0.725627385107593,2.01856680700503,1.82488679537915,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,2.21446636387394,0,1.2347220339942,0,0,0,0.590789906681404,0,0,4.11762744716461,0,0,0,0,0.325808305310325,1.03993478527958,1.44331342025273,1.27523445472584,4.22671299248958,1.01056513432752,0.462985512576611,2.66355813128438,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.560655421726804,0,4.6936502925408,0,0,1.690605505112,0,0,0,1.41849132023278,0,0.714889968290738,0,0,0.325736184293735,2.48774364119782,0,0.602878754119172,0,0.99972991182057,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0.336255431980582,0,0,0,3.30323011489202,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0.542530047399471,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0.195801157462741,0,0,0,0,0.606255142892519,3.32870879020994,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,1.51141141271498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0.460511024178389,0.275673144969061,0.214840489736547,0,0.340906509664404,0,0,0,0,0.2023155617111,0,0,0,0.308033580176089,0.532306030317022,0,1.11194531462352,0.858749320451947,1.48863347743867,0,0.38126038784765,0,0,0.636406495851874,0,0,1.64722217841633,0.824686816419805,0.202182481573316,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,2.15117028306077,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0.80719882876419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,2.96964680832639,0,0,0.281338832821026,0.779160935160341,0,0,0,0,0,6.54519568013791,0,0,0,0,0,0.197286811273867,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0,0,0.438770794307945,0,0,0.307801034015188,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.505492637027904,0,0,0,0.330991955875499,0.313932918407225,0,0,0.277349346026277,0,0,0,0,3.61170668190395,0,0,0,0,17.2982008315341,0,1.37041924646751,0,0.316553979779393,0,0.0801588202515337,0.426905989478705,0.599428828746391,0,0,0,0,0,0,0,0,0.305994652908965,4.6232094384243,0,0.273810757783986,0,4.29765441419957,0,0.558564802544508,0,0,0,0,0,0.940568614814168,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.482259445395058,0.275078873194468,1.24632101408756,0,0,0.242998226632099,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0.25426853765475,2.71499800876856,0,1.30634944043764,0,0,0.170388021785422,0,0.439656701034247,0,0.258565912723101,0.26446520348538,0.855434189421647,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.244052529803926,0.500763722825999,0.573409195690071,0,0.372578417648301,0,0.499921631848426,0.303298235083296,0,2.35265819698172,0,0,0.149254802886874,0.233713309847224,1.10961172300523,0,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0.591420599958536,0.159296767163702,0,1.70789252563885,7.87941794897625,1.06336685823198,0,1.50257608997218,0.761610424337591,0.813741466409323,0.181848659202559,1.39633724155235,2.32016879939247,1.59238355479446,0.400027764663154,0,0,0,0,0,0.782982875895635,0.680117776536817,0.463044948647668,0,0.358177682162975,0.308801447160972,0.657852148736121,0.176689145945881,0,6.41981274481676,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0.754773679776773,0.943595651135378,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.41023272848151,0,0.207471757392654,0.161475645631851,0,0,0,0,0.115525666150338,0,0.690359926060101,0,1.27857558193737,0,0,0,0.163771917510097,0,0.202612753855184,0,0.413373593002368,0.317079050969534,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.230467975111559,0.514464028312255,0.475788130837822,0.394636641377094,0,0.111231401892069,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0.751871343838829,0.709036767709349,0,0,0,1.36410323371586,0,0,0.286679166302903,1.26217249754548,0.135982980381829,0.436350690340377,0,0,0,0,12.742808908343,4.04282616265674,0.253397002022874,0.509944148709909,0.26721740526556,0.459474497674225,0,0.303114792872958,0,0,0.20686599172379,0,0.714193294391221,0,0.0620747142958579,0,0.0636471582781649,0.606351566874658,0.217716747896961,0.684466602170562,0.134704106029175,0.0717222053926763,0,0,0.106727345877715,0,0.179650404213174,0,0.611207220914332,0.813792356631477,0.665756774185513,0,0 | |||
|short_description=p2@AB385497 | |||
}} |
Revision as of 06:14, 23 January 2014
Short description: | p2@AB385497 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB385497_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_AB385497_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.80e-43 | 24 |
blood vessel endothelial cell | 2.21e-35 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.21e-35 | 18 |
endothelial cell | 5.11e-35 | 36 |
meso-epithelial cell | 1.76e-31 | 45 |
lining cell | 1.07e-22 | 58 |
barrier cell | 1.07e-22 | 58 |
endothelial cell of artery | 9.35e-21 | 9 |
vein endothelial cell | 6.76e-15 | 6 |
mesodermal cell | 1.79e-14 | 121 |
aortic endothelial cell | 3.17e-14 | 6 |
cardiac fibroblast | 3.33e-14 | 6 |
lymphangioblast | 9.41e-10 | 6 |
endothelial cell of lymphatic vessel | 9.41e-10 | 6 |
vascular lymphangioblast | 9.41e-10 | 6 |
squamous epithelial cell | 5.32e-09 | 63 |
endothelial cell of umbilical vein | 1.15e-08 | 3 |
cardiocyte | 1.21e-08 | 16 |
embryonic cell | 1.74e-08 | 250 |
ciliated cell | 8.05e-08 | 3 |
ciliated epithelial cell | 8.05e-08 | 3 |
multi-ciliated epithelial cell | 8.05e-08 | 3 |
non-pigmented ciliary epithelial cell | 8.05e-08 | 3 |
epithelial cell | 8.83e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.14e-07 | 14 |