FFCP PHASE1:Hg19::chr19:44100155..44100211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=126298 | |EntrezGene=entrezgene:126298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=24868 | |HGNC=HGNC:24868 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q8WZA9 | |UniProt=uniprot:Q8WZA9 | ||
|association_with_transcript=75bp_to_ENST00000422989,NM_001007561,uc010eiv.2_5end | |association_with_transcript=75bp_to_ENST00000422989,NM_001007561,uc010eiv.2_5end | ||
|cluster_id=chr19:44100155..44100211,- | |||
|description=CAGE_peak_1_at_IRGQ_5end | |description=CAGE_peak_1_at_IRGQ_5end | ||
|id=chr19:44100155..44100211,- | |id=chr19:44100155..44100211,- | ||
Revision as of 14:28, 27 July 2015
| Short description: | p1@IRGQ |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_IRGQ_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 75bp_to_ENST00000422989, NM_001007561, uc010eiv.2_5end |
| EntrezGene: | 126298 |
| HGNC: | 24868 |
| UniProt: | Q8WZA9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@IRGQ |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 5.41e-08 | 121 |
| endothelial cell | 3.02e-07 | 36 |
| meso-epithelial cell | 5.21e-07 | 45 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| tube | 1.14e-29 | 192 |
| anatomical conduit | 7.65e-28 | 240 |
| epithelium | 2.50e-26 | 306 |
| cell layer | 4.04e-26 | 309 |
| developing anatomical structure | 1.19e-24 | 581 |
| neural tube | 3.26e-24 | 56 |
| neural rod | 3.26e-24 | 56 |
| future spinal cord | 3.26e-24 | 56 |
| neural keel | 3.26e-24 | 56 |
| neural plate | 3.61e-23 | 82 |
Showing 1 to 10 of 64 entries
