FFCP PHASE1:Hg19::chrX:49121165..49121179,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=50943 | |EntrezGene=entrezgene:50943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6106 | |HGNC=HGNC:6106 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9BZS1 | |UniProt=uniprot:Q9BZS1 | ||
|association_with_transcript=108bp_to_ENST00000376199,ENST00000376207,NM_001114377,NM_014009,uc004dne.3,uc004dnf.3_5end | |association_with_transcript=108bp_to_ENST00000376199,ENST00000376207,NM_001114377,NM_014009,uc004dne.3,uc004dnf.3_5end | ||
|cluster_id=chrX:49121165..49121179,- | |||
|coexpression_cluster_id=C144 | |coexpression_cluster_id=C144 | ||
|description=CAGE_peak_1_at_FOXP3_5end | |description=CAGE_peak_1_at_FOXP3_5end | ||
Revision as of 08:41, 1 August 2015
| Short description: | p1@FOXP3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_FOXP3_5end |
| Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
| Association with transcript: | 108bp_to_ENST00000376199, ENST00000376207, NM_001114377, NM_014009, uc004dne.3, uc004dnf.3_5end |
| EntrezGene: | 50943 |
| HGNC: | 6106 |
| UniProt: | Q9BZS1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@FOXP3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 2.93e-25 | 18 |
| alpha-beta T cell | 2.93e-25 | 18 |
| immature T cell | 2.93e-25 | 18 |
| mature T cell | 2.93e-25 | 18 |
| immature alpha-beta T cell | 2.93e-25 | 18 |
| CD4-positive, alpha-beta T cell | 3.35e-18 | 6 |
| T cell | 2.97e-17 | 25 |
| pro-T cell | 2.97e-17 | 25 |
| CD8-positive, alpha-beta T cell | 3.67e-12 | 11 |
| leukocyte | 2.06e-11 | 136 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 4.41e-24 | 15 |
| haemolymphatic fluid | 4.41e-24 | 15 |
| organism substance | 4.41e-24 | 15 |
| hemopoietic organ | 2.77e-10 | 7 |
| immune organ | 2.77e-10 | 7 |
| hemolymphoid system | 2.77e-10 | 108 |
| hematopoietic system | 1.17e-09 | 98 |
| blood island | 1.17e-09 | 98 |
| thymus | 2.68e-07 | 4 |
| hemolymphoid system gland | 2.68e-07 | 4 |
Showing 1 to 10 of 14 entries
