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FFCP PHASE1:Mm9::chr14:32019968..32020001,-: Difference between revisions

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{{FFCP|EntrezGene=64652|HGNC=|MCL_coexpression_id=240|UniProt=Q80TM9|association_with_transcript=0bp_to_ENSMUST00000022469_5end|description=CAGE_peak_2_at_Nisch_5end|id=chr14:32019968..32020001,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.54e-13!50;UBERON:0006238!1.54e-13!50;UBERON:0002616!1.69e-13!49;UBERON:0002791!5.52e-12!29;UBERON:0003528!5.52e-12!29;UBERON:0001893!5.52e-12!29;UBERON:0001049!9.68e-11!52;UBERON:0005068!9.68e-11!52;UBERON:0006241!9.68e-11!52;UBERON:0007135!9.68e-11!52;UBERON:0002020!6.74e-10!34;UBERON:0003080!1.39e-09!40;UBERON:0002780!3.99e-09!39;UBERON:0001890!3.99e-09!39;UBERON:0006240!3.99e-09!39;UBERON:0000956!8.03e-09!21;UBERON:0001869!8.03e-09!21;UBERON:0000203!8.03e-09!21;UBERON:0000033!1.43e-08!63;UBERON:0002619!4.50e-08!17;UBERON:0001017!1.88e-07!73;UBERON:0005743!1.88e-07!73;UBERON:0000073!2.18e-07!75;UBERON:0001016!2.18e-07!75;UBERON:0002021!7.61e-07!10;UBERON:0000411!7.61e-07!10;UBERON:0001950!7.61e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.51e-12,29;UBERON:0002791,5.51e-12,29;UBERON:0001893,5.51e-12,29;UBERON:0000073,6.17e-12,54;UBERON:0000955,9.29e-12,47;UBERON:0006238,9.29e-12,47;UBERON:0002616,1.03e-11,46;UBERON:0001049,9.67e-11,52;UBERON:0005068,9.67e-11,52;UBERON:0006241,9.67e-11,52;UBERON:0007135,9.67e-11,52;UBERON:0002020,6.73e-10,34;UBERON:0003080,1.39e-09,40;UBERON:0002780,3.98e-09,39;UBERON:0001890,3.98e-09,39;UBERON:0006240,3.98e-09,39;UBERON:0000956,8.02e-09,21;UBERON:0001869,8.02e-09,21;UBERON:0000203,8.02e-09,21;UBERON:0002619,4.50e-08,17;UBERON:0001017,1.84e-07,73;UBERON:0001016,2.13e-07,75;UBERON:0000160,2.47e-07,31;UBERON:0002021,7.61e-07,10;UBERON:0000411,7.61e-07,10;UBERON:0001950,7.61e-07,10|phase1_expression=2.7225304007815,40.1321718785265,41.4049307844478,58.9805212048319,58.6048004037226,27.1964420497261,23.3612640595526,4.9066862907799,0.985521055061667,0.936258105287974,0.34243593645101,0.717949430958028,6.33442700745461,7.16847299835779,7.32841475994458,6.88415909125408,6.29605690315332,4.10100814965709,3.29074640653773,4.2438965179803,13.6069264241712,1.19149141441062,0.783599367416806,11.1994695955385,10.782236210157,30.4342940980961,21.5380998079537,17.453169847557,12.1614988452079,20.6664706403143,6.65191531965914,5.08024538767705,6.76571266343027,0,19.3530585233354,13.4650062740379,15.7210404322024,14.2300754450549,14.0640362014284,18.8468547830567,28.8233429135197,29.3709558532132,22.8189865924642,6.04304726282771,5.87986201073184,4.22157529971868,14.0830441982647,7.41285531693518,10.3252505885202,13.026803237977,13.8586557409109,11.5002051491977,3.6912173332702,6.5282592781021,2.35265659399725,4.88792928468299,5.44413535883638,5.15672092277442,7.89034197352431,7.40587370980846,10.1413024560989,13.2149367506962,21.3430751066673,13.498495759221,17.7995945262055,17.7620028736525,13.1824048628098,12.6792040756113,10.2652716185393,12.0155285115205,11.3575479129746,8.56952953211411,5.52171352379034,16.9037302916637,12.0765293482978,11.0306254393203,30.8324466798288,49.9257491913084,45.3139273105918,17.2771036926554,14.6380229763855,15.106487746146,39.6439858581961,25.3243174514256,35.1435969886663,4.41942878210502,4.8406371471695,6.15118171223492,4.92220256665696,11.1090193356975,8.40607017234866,35.2773789562368,18.3592260101093,33.4615978815447,23.3919510281161,29.1217476613268,12.4995533917259,4.26075806445144,3.37721805983729,4.94675404314476,2.53518155598025,7.69958864485907,7.64415719119937,14.2213340630666,4.32982082022428,3.29367825117628,5.05524445014783,13.0169622879728,5.69663344023778,6.97678053604676,2.94925055502431,3.34912026143355,4.84292544237723,4.82312449768392,4.11560474974967,11.8126595849895,8.65182387070309,13.5923395504717,4.42305275974937,5.01477234836968,6.40440403535141,8.24287930329878,16.775258509631,30.7419836862124,35.8153868651008,17.6265368093928,0.958520996047362,2.39961092397363,2.1601938602421,27.7112682898922,24.2475319493872,12.062817802835,35.2863369990321,35.8001640262463,35.9473317088039,28.5544622999253,2.34230536855727,6.09594155989456,5.81262344397452,25.0425808504904,1.43132487258974,3.21862946206862,1.62055916824814,2.56198190320716,2.65342346690179,1.40925092313335,2.43624483855295,9.57202471734358,1.94011193639558,1.32374256117473,1.05570674498369,1.97276159184817,3.33656699070717,5.57203466435466,6.1734640922383,2.58744546864041,1.40442637462647,0.772043721344145,2.84163499395593,3.10688658803253,0.703578179943289,1.98068267607116,2.3674473558521,1.18058539048442,1.3884040159864,3.48800917125612,2.95100741539581,2.91913355917924,1.97471819896177,1.97000956894914,2.75633952455909,3.21639972335731,2.85415149878366,2.95254121272818,35.7492912559016,13.7892180588241,15.8601015832223,14.0158800331678,1.70630600428187,0.928946687441754,3.35055399437443,10.4875432804138,15.1217069814512,11.9842144450912,16.6085171540579,13.5053142873689,11.3100843960121,15.5186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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:64652
|HGNC=
|MCL_coexpression_id=240
|TSSclassifier=NA
|UniProt=uniprot:Q80TM9
|association_with_transcript=0bp_to_ENSMUST00000022469_5end
|cluster_id=chr14:32019968..32020001,-
|description=CAGE_peak_2_at_Nisch_5end
|id=chr14:32019968..32020001,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.54e-13!50;UBERON:0006238!1.54e-13!50;UBERON:0002616!1.69e-13!49;UBERON:0002791!5.52e-12!29;UBERON:0003528!5.52e-12!29;UBERON:0001893!5.52e-12!29;UBERON:0001049!9.68e-11!52;UBERON:0005068!9.68e-11!52;UBERON:0006241!9.68e-11!52;UBERON:0007135!9.68e-11!52;UBERON:0002020!6.74e-10!34;UBERON:0003080!1.39e-09!40;UBERON:0002780!3.99e-09!39;UBERON:0001890!3.99e-09!39;UBERON:0006240!3.99e-09!39;UBERON:0000956!8.03e-09!21;UBERON:0001869!8.03e-09!21;UBERON:0000203!8.03e-09!21;UBERON:0000033!1.43e-08!63;UBERON:0002619!4.50e-08!17;UBERON:0001017!1.88e-07!73;UBERON:0005743!1.88e-07!73;UBERON:0000073!2.18e-07!75;UBERON:0001016!2.18e-07!75;UBERON:0002021!7.61e-07!10;UBERON:0000411!7.61e-07!10;UBERON:0001950!7.61e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.51e-12,29;UBERON:0002791,5.51e-12,29;UBERON:0001893,5.51e-12,29;UBERON:0000073,6.17e-12,54;UBERON:0000955,9.29e-12,47;UBERON:0006238,9.29e-12,47;UBERON:0002616,1.03e-11,46;UBERON:0001049,9.67e-11,52;UBERON:0005068,9.67e-11,52;UBERON:0006241,9.67e-11,52;UBERON:0007135,9.67e-11,52;UBERON:0002020,6.73e-10,34;UBERON:0003080,1.39e-09,40;UBERON:0002780,3.98e-09,39;UBERON:0001890,3.98e-09,39;UBERON:0006240,3.98e-09,39;UBERON:0000956,8.02e-09,21;UBERON:0001869,8.02e-09,21;UBERON:0000203,8.02e-09,21;UBERON:0002619,4.50e-08,17;UBERON:0001017,1.84e-07,73;UBERON:0001016,2.13e-07,75;UBERON:0000160,2.47e-07,31;UBERON:0002021,7.61e-07,10;UBERON:0000411,7.61e-07,10;UBERON:0001950,7.61e-07,10
|phase1_expression=2.7225304007815,40.1321718785265,41.4049307844478,58.9805212048319,58.6048004037226,27.1964420497261,23.3612640595526,4.9066862907799,0.985521055061667,0.936258105287974,0.34243593645101,0.717949430958028,6.33442700745461,7.16847299835779,7.32841475994458,6.88415909125408,6.29605690315332,4.10100814965709,3.29074640653773,4.2438965179803,13.6069264241712,1.19149141441062,0.783599367416806,11.1994695955385,10.782236210157,30.4342940980961,21.5380998079537,17.453169847557,12.1614988452079,20.6664706403143,6.65191531965914,5.08024538767705,6.76571266343027,0,19.3530585233354,13.4650062740379,15.7210404322024,14.2300754450549,14.0640362014284,18.8468547830567,28.8233429135197,29.3709558532132,22.8189865924642,6.04304726282771,5.87986201073184,4.22157529971868,14.0830441982647,7.41285531693518,10.3252505885202,13.026803237977,13.8586557409109,11.5002051491977,3.6912173332702,6.5282592781021,2.35265659399725,4.88792928468299,5.44413535883638,5.15672092277442,7.89034197352431,7.40587370980846,10.1413024560989,13.2149367506962,21.3430751066673,13.498495759221,17.7995945262055,17.7620028736525,13.1824048628098,12.6792040756113,10.2652716185393,12.0155285115205,11.3575479129746,8.56952953211411,5.52171352379034,16.9037302916637,12.0765293482978,11.0306254393203,30.8324466798288,49.9257491913084,45.3139273105918,17.2771036926554,14.6380229763855,15.106487746146,39.6439858581961,25.3243174514256,35.1435969886663,4.41942878210502,4.8406371471695,6.15118171223492,4.92220256665696,11.1090193356975,8.40607017234866,35.2773789562368,18.3592260101093,33.4615978815447,23.3919510281161,29.1217476613268,12.4995533917259,4.26075806445144,3.37721805983729,4.94675404314476,2.53518155598025,7.69958864485907,7.64415719119937,14.2213340630666,4.32982082022428,3.29367825117628,5.05524445014783,13.0169622879728,5.69663344023778,6.97678053604676,2.94925055502431,3.34912026143355,4.84292544237723,4.82312449768392,4.11560474974967,11.8126595849895,8.65182387070309,13.5923395504717,4.42305275974937,5.01477234836968,6.40440403535141,8.24287930329878,16.775258509631,30.7419836862124,35.8153868651008,17.6265368093928,0.958520996047362,2.39961092397363,2.1601938602421,27.7112682898922,24.2475319493872,12.062817802835,35.2863369990321,35.8001640262463,35.9473317088039,28.5544622999253,2.34230536855727,6.09594155989456,5.81262344397452,25.0425808504904,1.43132487258974,3.21862946206862,1.62055916824814,2.56198190320716,2.65342346690179,1.40925092313335,2.43624483855295,9.57202471734358,1.94011193639558,1.32374256117473,1.05570674498369,1.97276159184817,3.33656699070717,5.57203466435466,6.1734640922383,2.58744546864041,1.40442637462647,0.772043721344145,2.84163499395593,3.10688658803253,0.703578179943289,1.98068267607116,2.3674473558521,1.18058539048442,1.3884040159864,3.48800917125612,2.95100741539581,2.91913355917924,1.97471819896177,1.97000956894914,2.75633952455909,3.21639972335731,2.85415149878366,2.95254121272818,35.7492912559016,13.7892180588241,15.8601015832223,14.0158800331678,1.70630600428187,0.928946687441754,3.35055399437443,10.4875432804138,15.1217069814512,11.9842144450912,16.6085171540579,13.5053142873689,11.3100843960121,15.5186048192098,15.0122347081723,15.2799299471218,13.8328351919804,20.7106924184542,2.46568271239006,2.39921876480431,0,3.66572390121566,3.10323979468201,4.1380133735288,7.52514791778662,13.4325234661438,17.4268587903926,19.6201490635663,24.6055680482334,5.00535317148282,5.11053387294328,6.97072548393047,7.50582449137461,8.44120059133459,6.3656462945355,7.48009957372108,4.05338066937588,11.2570179407113,8.62609239164127,14.8856379067401,17.1620720213008,27.025939940341,24.2186508254581,31.8412724099822,8.12914036733061,0.947457058852424,1.46668478797823,1.52770577197669,1.87752198630802,5.52770649557992,6.42717830392237,7.21994497073856,3.62560831444239,3.76489972402917,6.69710028361446,7.37384916220821,7.59813920209941,9.69148692496127,22.6186925908908,17.9488875660174,17.7035138286853,7.72622889653251,28.2569038378514,26.6070528564301,1.80328439914343,8.07906967053994,2.52406575533005,1.56175497718655,1.29254038639679,2.86762557543062,0.668396022247182,3.11384183867716,2.02405350837447,1.46127928955656,1.18586333383957,9.96096080907602,4.25820255624806,4.45164009168138,4.23506094319298,6.76377504187395,11.9470624505967,0.971122544619926,3.02323556964751,8.86443874852721,10.9261700365886,11.9899707698132,5.16856586336442,5.45300594216258,8.19943970284859,12.3254335594968,13.7044191147498,21.6584640821192,7.14923172082955,1.62054984628179,2.8458910432206,3.00071849044229,3.54680467284547,8.56170324489939,5.26556865926787,7.91608867697958,15.0189893160775,4.66030555900404,5.29268155331909,5.93590510589328,6.45857706783622,7.47880269109133,8.47543642422269,8.20704498725306,18.9462543809403,28.740921811629,5.98048082792484,4.74689796315412,4.44466865687308,7.34636982318295,6.28793447516716,4.80434163733698,2.20971958992012,2.09927178485487,0.690999869022119,10.5013767981662,1.58167996790568,3.25311147402958,4.21220829205025,5.01811910434725,6.11415178489297,7.68726774393478,9.4224939526883,15.9671124610258,13.0911123024711,11.1841076355647,4.50954350947352,2.24274819065968,2.15096037594227,3.88902376688095,1.80823752868824,3.37912250981556,2.58185925020659,2.8644964665669,4.61381115473128,4.83168241652012,4.89651010638371,2.52808896502543,2.02725215290164,3.28675062927447,3.24802057444488,2.32734704367726,1.98681354781265,1.80293174279953,1.9199638532695,2.1202954489111,2.209997392995,2.52065462842101,1.94915761479505,2.02044867444692,1.75315353272353,9.74940649545409,1.33191572024439,0.538283139656854,2.68615386182526,7.34120457322324,10.8855835761686,8.60812634056146,10.0753138167161,8.02515366456581,29.9318476587045,24.8575627713876,28.6447756719698,31.7928387335822,31.5137959094495,27.9495742034189,32.4010800111267,29.2708782095743,35.345107900768,24.8524949640874,2.17953429926771,3.19219898720825,3.41467211508268,7.29320151204882,6.70762120409543,7.90527086335061,9.33436256766784,8.24140228955577,7.70206103020357,7.32821914115013,7.09742039692671,7.9223063382152,8.80230170216895,10.308049537184,9.76402972245426,10.9547548995107,9.15486174964358,10.2241886845764,7.41754621445952,10.8927200899454,10.9718160763333,9.9386451449229,8.58370283810355,7.55801366488108,7.71696919405711,9.64606529965112,8.78054269789308,10.7858581689516,8.82726739998101,6.73370725989286,9.25353141368558,10.4414751318097,12.6861623382604,8.52152626522813,7.13754460630223,10.7418548513317,9.35726433781634,7.09074478359384,8.03410994689142,7.94129108830256,5.10109238364927
|short_description=p2@Nisch
}}

Revision as of 05:57, 4 August 2015

Short description:p2@Nisch
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nisch_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: 0bp_to_ENSMUST00000022469_5end
EntrezGene:64652
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Nisch

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I540.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I641.40
CD326+ enterocyte, pool1.CNhs13542.11848-124I358.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I458.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I727.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.36
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.78
GP2+ M cell, pool1.CNhs13228.11845-124H930.43
GP2+ M cell, pool2.CNhs13231.11846-124I121.54
GP2+ M cell, pool3.CNhs13240.11847-124I217.45
Ileum epithelium, pool1.CNhs13199.10252-104B912.16
Ileum epithelium, pool2.CNhs13232.10253-104C120.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F519.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H318.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H229.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H422.82
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.69
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C37.89
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D121.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.76
Mouse Microglia, donor1.CNhs12629.11718-123C813.18
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F349.93
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D745.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E439.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D94.92
Mouse Schwann, donor2.CNhs12573.11746-123F911.11
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F735.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C833.46
Mouse hepatocyte, donor6.CNhs13090.11822-124F423.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.12
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.02
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D76.98
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I311.81
amnion, adult pregnant day17.5.CNhs10488.583-22A88.65
aorta, adult.CNhs10498.46-23H113.59
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B230.74
cerebellum, neonate N30.CNhs11135.1395-42I235.82
colon, adult.CNhs10468.36-18H717.63
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A427.71
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F112.06
cortex, adult.CNhs10473.12-14D535.29
cortex, neonate N30.CNhs11107.1392-42F235.80
diencephalon, adult.CNhs10482.20-12F235.95
diencephalon, neonate N30.CNhs11201.1388-42B228.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.10
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G425.04
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A29.57
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B56.17
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E835.75
hippocampus, neonate N00.CNhs11228.627-43G113.79
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A314.02
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H410.49
intestine, embryo E17.CNhs10582.482-18D315.12
intestine, embryo E18.CNhs10526.1289-20F711.98
intestine, neonate N00.CNhs11126.644-26D116.61
intestine, neonate N01.CNhs11192.1322-23E913.51
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F215.52
intestine, neonate N10.CNhs11098.755-23A515.01
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E313.83
intestine, neonate N30.CNhs11131.1384-42G120.71
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G74.14
kidney, neonate N10.CNhs11206.758-6D57.53
kidney, neonate N20.CNhs11113.832-19I113.43
kidney, neonate N25.CNhs11122.1353-25F317.43
kidney, neonate N30.CNhs11203.1385-42H119.62
liver, adult pregnant day01.CNhs10466.508-5B224.61
liver, embryo E12.CNhs10601.355-15F85.01
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E16.97
liver, embryo E15.CNhs10520.433-16D77.51
liver, embryo E16.CNhs10523.462-17F58.44
liver, embryo E17.CNhs10510.481-18A36.37
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B917.16
liver, neonate N20.CNhs11220.823-25A327.03
liver, neonate N25.CNhs11198.1368-26H124.22
liver, neonate N30.CNhs11106.1382-42D131.84
lung, adult.CNhs10474.28-22B18.13
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A47.37
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H29.69
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B617.70
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C228.26
medulla oblongata, neonate N30.CNhs11200.1396-42A326.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G66.76
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E58.86
pancreas, embryo E17.CNhs10599.1558-45G310.93
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F68.56
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I715.02
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G46.46
skin, neonate N03.CNhs11215.662-22H37.48
skin, neonate N06.CNhs11097.693-20I58.48
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I118.95
spinal cord, adult.CNhs10505.24-13C928.74
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H16.29
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B87.69
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I113.09
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D94.61
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D32.21
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E47.34
uterus, adult pregnant day19.CNhs10497.590-15F510.89
uterus, adult.CNhs10509.92-27E58.61
vagina, adult.CNhs10502.89-27D510.08
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A431.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.95
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B16.71
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.52
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I510.74
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C68.03
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain grey matter5.51e-1229
regional part of telencephalon5.51e-1229
telencephalon5.51e-1229
regional part of nervous system6.17e-1254
brain9.29e-1247
future brain9.29e-1247
regional part of brain1.03e-1146
neural tube9.67e-1152
neural rod9.67e-1152
future spinal cord9.67e-1152
neural keel9.67e-1152
gray matter6.73e-1034
anterior neural tube1.39e-0940
regional part of forebrain3.98e-0939
forebrain3.98e-0939
future forebrain3.98e-0939
cerebral cortex8.02e-0921
cerebral hemisphere8.02e-0921
pallium8.02e-0921
regional part of cerebral cortex4.50e-0817
central nervous system1.84e-0773
nervous system2.13e-0775
intestine2.47e-0731
occipital lobe7.61e-0710
visual cortex7.61e-0710
neocortex7.61e-0710
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