FFCP PHASE1:Mm9::chr5:75559819..75559830,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=9|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:75559819..75559830,+|id=chr5:75559819..75559830,+|ontology_enrichment_celltype=CL:0000197!7.82e-08!2;CL:0002491!7.82e-08!2;CL:0000098!7.82e-08!2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000058!8.00e-10!6;UBERON:0003465!7.82e-08!2;UBERON:0008193!7.82e-08!2;UBERON:0000032!7.82e-08!2;UBERON:0005744!7.82e-08!2;UBERON:0008001!7.82e-08!2;UBERON:0007497!7.82e-08!2;UBERON:0009955!7.82e-08!2;UBERON:0003067!7.82e-08!2;UBERON:0002546!7.82e-08!2;UBERON:0007914!7.82e-08!2;UBERON:0003457!7.82e-08!2;UBERON:0004766!7.82e-08!2;UBERON:0005253!7.82e-08!2;UBERON:0002227!7.82e-08!2;UBERON:0001846!7.82e-08!2;UBERON:0003128!7.82e-08!2;UBERON:0002241!7.82e-08!2;UBERON:0002105!7.82e-08!2;UBERON:0001678!7.82e-08!2;UBERON:0003129!7.82e-08!2;UBERON:0001694!7.82e-08!2;UBERON:0004681!7.82e-08!2;UBERON:0001839!7.82e-08!2;UBERON:0001690!7.82e-08!2;UBERON:0001844!7.82e-08!2;UBERON:0001849!7.82e-08!2;UBERON:0002499!7.82e-08!2;UBERON:0005944!7.82e-08!2;UBERON:0001855!7.82e-08!2;UBERON:0001703!7.82e-08!2;UBERON:0003069!7.82e-08!2;UBERON:0003051!7.82e-08!2;UBERON:0004288!7.82e-08!2;UBERON:0004637!7.82e-08!2;UBERON:0004761!7.82e-08!2;UBERON:0010113!7.82e-08!2;UBERON:0003089!7.82e-08!2;UBERON:0009123!7.82e-08!2;UBERON:0009617!7.82e-08!2;UBERON:0005641!7.82e-08!2;UBERON:0001896!2.45e-07!2;UBERON:0005290!2.45e-07!2;UBERON:0010096!2.45e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.28e-58,3;UBERON:0006555,3.28e-58,3;UBERON:0005103,3.28e-58,3;UBERON:0000083,3.28e-58,3;UBERON:0009201,3.28e-58,3;UBERON:0004819,3.28e-58,3;UBERON:0006553,3.28e-58,3;UBERON:0003074,3.28e-58,3;UBERON:0003060,3.28e-58,3;UBERON:0000080,4.54e-44,4;UBERON:0005904,4.54e-44,4;UBERON:0006947,4.54e-44,4;UBERON:0002120,4.54e-44,4;UBERON:0004054,4.54e-44,4;UBERON:0004875,4.54e-44,4;UBERON:0004876,4.54e-44,4;UBERON:0005721,4.54e-44,4;UBERON:0005754,4.54e-44,4;UBERON:0007297,4.54e-44,4;UBERON:0000058,7.57e-26,7;UBERON:0001343,9.50e-23,2;UBERON:0004910,9.50e-23,2;UBERON:0004909,9.50e-23,2;UBERON:0005154,9.50e-23,2;UBERON:0005295,9.50e-23,2;UBERON:0005297,9.50e-23,2;UBERON:0005294,9.50e-23,2;UBERON:0010141,9.50e-23,2;UBERON:0005891,9.50e-23,2;UBERON:0004175,1.98e-20,9;UBERON:0003887,1.57e-18,10;UBERON:0004871,1.12e-15,3;UBERON:0002113,1.25e-13,14;UBERON:0003918,1.25e-13,14;UBERON:0011143,1.25e-13,14;UBERON:0003064,1.25e-13,14;UBERON:0005095,1.25e-13,14;UBERON:0007687,1.25e-13,14;UBERON:0003135,8.25e-13,15;UBERON:0003101,4.31e-12,16;UBERON:0000079,4.31e-12,16;UBERON:0006554,6.81e-11,18;UBERON:0001008,2.18e-10,19;UBERON:0004122,5.59e-10,5;UBERON:0000489,1.61e-09,21;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0,1.99051152976149,11.1198013710817,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:75559819..75559830,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:75559819..75559830,+ | |||
|description=CAGE_peak_at_chr5:75559819..75559830,+ | |||
|id=chr5:75559819..75559830,+ | |||
|ontology_enrichment_celltype=CL:0000197!7.82e-08!2;CL:0002491!7.82e-08!2;CL:0000098!7.82e-08!2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000058!8.00e-10!6;UBERON:0003465!7.82e-08!2;UBERON:0008193!7.82e-08!2;UBERON:0000032!7.82e-08!2;UBERON:0005744!7.82e-08!2;UBERON:0008001!7.82e-08!2;UBERON:0007497!7.82e-08!2;UBERON:0009955!7.82e-08!2;UBERON:0003067!7.82e-08!2;UBERON:0002546!7.82e-08!2;UBERON:0007914!7.82e-08!2;UBERON:0003457!7.82e-08!2;UBERON:0004766!7.82e-08!2;UBERON:0005253!7.82e-08!2;UBERON:0002227!7.82e-08!2;UBERON:0001846!7.82e-08!2;UBERON:0003128!7.82e-08!2;UBERON:0002241!7.82e-08!2;UBERON:0002105!7.82e-08!2;UBERON:0001678!7.82e-08!2;UBERON:0003129!7.82e-08!2;UBERON:0001694!7.82e-08!2;UBERON:0004681!7.82e-08!2;UBERON:0001839!7.82e-08!2;UBERON:0001690!7.82e-08!2;UBERON:0001844!7.82e-08!2;UBERON:0001849!7.82e-08!2;UBERON:0002499!7.82e-08!2;UBERON:0005944!7.82e-08!2;UBERON:0001855!7.82e-08!2;UBERON:0001703!7.82e-08!2;UBERON:0003069!7.82e-08!2;UBERON:0003051!7.82e-08!2;UBERON:0004288!7.82e-08!2;UBERON:0004637!7.82e-08!2;UBERON:0004761!7.82e-08!2;UBERON:0010113!7.82e-08!2;UBERON:0003089!7.82e-08!2;UBERON:0009123!7.82e-08!2;UBERON:0009617!7.82e-08!2;UBERON:0005641!7.82e-08!2;UBERON:0001896!2.45e-07!2;UBERON:0005290!2.45e-07!2;UBERON:0010096!2.45e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.28e-58,3;UBERON:0006555,3.28e-58,3;UBERON:0005103,3.28e-58,3;UBERON:0000083,3.28e-58,3;UBERON:0009201,3.28e-58,3;UBERON:0004819,3.28e-58,3;UBERON:0006553,3.28e-58,3;UBERON:0003074,3.28e-58,3;UBERON:0003060,3.28e-58,3;UBERON:0000080,4.54e-44,4;UBERON:0005904,4.54e-44,4;UBERON:0006947,4.54e-44,4;UBERON:0002120,4.54e-44,4;UBERON:0004054,4.54e-44,4;UBERON:0004875,4.54e-44,4;UBERON:0004876,4.54e-44,4;UBERON:0005721,4.54e-44,4;UBERON:0005754,4.54e-44,4;UBERON:0007297,4.54e-44,4;UBERON:0000058,7.57e-26,7;UBERON:0001343,9.50e-23,2;UBERON:0004910,9.50e-23,2;UBERON:0004909,9.50e-23,2;UBERON:0005154,9.50e-23,2;UBERON:0005295,9.50e-23,2;UBERON:0005297,9.50e-23,2;UBERON:0005294,9.50e-23,2;UBERON:0010141,9.50e-23,2;UBERON:0005891,9.50e-23,2;UBERON:0004175,1.98e-20,9;UBERON:0003887,1.57e-18,10;UBERON:0004871,1.12e-15,3;UBERON:0002113,1.25e-13,14;UBERON:0003918,1.25e-13,14;UBERON:0011143,1.25e-13,14;UBERON:0003064,1.25e-13,14;UBERON:0005095,1.25e-13,14;UBERON:0007687,1.25e-13,14;UBERON:0003135,8.25e-13,15;UBERON:0003101,4.31e-12,16;UBERON:0000079,4.31e-12,16;UBERON:0006554,6.81e-11,18;UBERON:0001008,2.18e-10,19;UBERON:0004122,5.59e-10,5;UBERON:0000489,1.61e-09,21;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0,1.99051152976149,11.1198013710817,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:75559819..75559830,+ | |||
}} |
Latest revision as of 14:48, 4 August 2015
Short description: | p@chr5:75559819..75559830, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:75559819..75559830, + |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data