FFCP PHASE1:Mm9::chr2:21572063..21572066,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=135|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:21572063..21572066,+|id=chr2:21572063..21572066,+|ontology_enrichment_celltype=CL:0002614!9.94e-10!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.30e-27!50;UBERON:0006238!2.30e-27!50;UBERON:0002616!2.87e-25!49;UBERON:0002780!2.55e-24!39;UBERON:0001890!2.55e-24!39;UBERON:0006240!2.55e-24!39;UBERON:0002791!7.19e-24!29;UBERON:0003528!7.19e-24!29;UBERON:0001893!7.19e-24!29;UBERON:0003080!1.31e-23!40;UBERON:0000033!8.06e-23!63;UBERON:0001049!2.61e-21!52;UBERON:0005068!2.61e-21!52;UBERON:0006241!2.61e-21!52;UBERON:0007135!2.61e-21!52;UBERON:0003056!1.04e-20!49;UBERON:0002020!7.68e-20!34;UBERON:0002021!8.96e-20!10;UBERON:0000411!8.96e-20!10;UBERON:0001950!8.96e-20!10;UBERON:0001017!4.33e-19!73;UBERON:0005743!4.33e-19!73;UBERON:0000073!1.90e-18!75;UBERON:0001016!1.90e-18!75;UBERON:0002346!4.80e-16!71;UBERON:0003075!4.80e-16!71;UBERON:0007284!4.80e-16!71;UBERON:0007811!2.20e-15!86;UBERON:0002619!8.40e-14!17;UBERON:0000153!1.20e-13!94;UBERON:0004121!1.48e-13!102;UBERON:0000924!1.48e-13!102;UBERON:0006601!1.48e-13!102;UBERON:0000956!2.31e-13!21;UBERON:0001869!2.31e-13!21;UBERON:0000203!2.31e-13!21;UBERON:0002420!1.35e-12!8;UBERON:0007245!1.35e-12!8;UBERON:0010009!1.35e-12!8;UBERON:0010011!1.35e-12!8;UBERON:0000454!1.35e-12!8;UBERON:0002038!9.94e-10!3;UBERON:0002308!9.94e-10!3;UBERON:0009663!9.94e-10!3;UBERON:0009661!9.94e-10!3;UBERON:0006331!9.94e-10!3;UBERON:0000125!9.94e-10!3;UBERON:0000025!3.34e-08!114;UBERON:0002298!5.02e-08!6;UBERON:0002950!2.16e-07!4;UBERON:0001891!2.16e-07!4;UBERON:0009616!2.16e-07!4;UBERON:0004111!2.32e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.43e-44,10;UBERON:0000411,8.43e-44,10;UBERON:0001950,8.43e-44,10;UBERON:0002619,3.95e-26,17;UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0003528,1.24e-15,29;UBERON:0002791,1.24e-15,29;UBERON:0001893,1.24e-15,29;UBERON:0002020,1.96e-13,34;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0.125654352112864,0.347648640384553,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0,3.09335728218638,0.685082519770642,0,2.02506750069542,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr2:21572063..21572066,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:21572063..21572066,+ | |||
|description=CAGE_peak_at_chr2:21572063..21572066,+ | |||
|id=chr2:21572063..21572066,+ | |||
|ontology_enrichment_celltype=CL:0002614!9.94e-10!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.30e-27!50;UBERON:0006238!2.30e-27!50;UBERON:0002616!2.87e-25!49;UBERON:0002780!2.55e-24!39;UBERON:0001890!2.55e-24!39;UBERON:0006240!2.55e-24!39;UBERON:0002791!7.19e-24!29;UBERON:0003528!7.19e-24!29;UBERON:0001893!7.19e-24!29;UBERON:0003080!1.31e-23!40;UBERON:0000033!8.06e-23!63;UBERON:0001049!2.61e-21!52;UBERON:0005068!2.61e-21!52;UBERON:0006241!2.61e-21!52;UBERON:0007135!2.61e-21!52;UBERON:0003056!1.04e-20!49;UBERON:0002020!7.68e-20!34;UBERON:0002021!8.96e-20!10;UBERON:0000411!8.96e-20!10;UBERON:0001950!8.96e-20!10;UBERON:0001017!4.33e-19!73;UBERON:0005743!4.33e-19!73;UBERON:0000073!1.90e-18!75;UBERON:0001016!1.90e-18!75;UBERON:0002346!4.80e-16!71;UBERON:0003075!4.80e-16!71;UBERON:0007284!4.80e-16!71;UBERON:0007811!2.20e-15!86;UBERON:0002619!8.40e-14!17;UBERON:0000153!1.20e-13!94;UBERON:0004121!1.48e-13!102;UBERON:0000924!1.48e-13!102;UBERON:0006601!1.48e-13!102;UBERON:0000956!2.31e-13!21;UBERON:0001869!2.31e-13!21;UBERON:0000203!2.31e-13!21;UBERON:0002420!1.35e-12!8;UBERON:0007245!1.35e-12!8;UBERON:0010009!1.35e-12!8;UBERON:0010011!1.35e-12!8;UBERON:0000454!1.35e-12!8;UBERON:0002038!9.94e-10!3;UBERON:0002308!9.94e-10!3;UBERON:0009663!9.94e-10!3;UBERON:0009661!9.94e-10!3;UBERON:0006331!9.94e-10!3;UBERON:0000125!9.94e-10!3;UBERON:0000025!3.34e-08!114;UBERON:0002298!5.02e-08!6;UBERON:0002950!2.16e-07!4;UBERON:0001891!2.16e-07!4;UBERON:0009616!2.16e-07!4;UBERON:0004111!2.32e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.43e-44,10;UBERON:0000411,8.43e-44,10;UBERON:0001950,8.43e-44,10;UBERON:0002619,3.95e-26,17;UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0003528,1.24e-15,29;UBERON:0002791,1.24e-15,29;UBERON:0001893,1.24e-15,29;UBERON:0002020,1.96e-13,34;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0.125654352112864,0.347648640384553,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0,3.09335728218638,0.685082519770642,0,2.02506750069542,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:21572063..21572066,+ | |||
}} |
Latest revision as of 19:18, 4 August 2015
Short description: | p@chr2:21572063..21572066, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:21572063..21572066, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 8.43e-44 | 10 |
visual cortex | 8.43e-44 | 10 |
neocortex | 8.43e-44 | 10 |
regional part of cerebral cortex | 3.95e-26 | 17 |
cerebral cortex | 2.63e-21 | 21 |
cerebral hemisphere | 2.63e-21 | 21 |
pallium | 2.63e-21 | 21 |
brain grey matter | 1.24e-15 | 29 |
regional part of telencephalon | 1.24e-15 | 29 |
telencephalon | 1.24e-15 | 29 |
gray matter | 1.96e-13 | 34 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |