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FFCP PHASE1:Mm9::chr12:25393849..25393869,+: Difference between revisions

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{{FFCP|EntrezGene=20135|HGNC=|UniProt=F6RUC3|association_with_transcript=-24bp_to_ENSMUST00000154588_5end|description=CAGE_peak_4_at_Rrm2_5end|id=chr12:25393849..25393869,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,5.49e-07,3;CL:0000351,5.49e-07,3;CL:0002027,7.48e-07,3;CL:0002006,7.48e-07,3;CL:0002024,7.48e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.03e-14,29;UBERON:0005057,1.03e-14,29;UBERON:0000077,3.18e-13,35;UBERON:0002390,5.22e-12,45;UBERON:0003061,5.22e-12,45;UBERON:0002193,6.20e-11,48;UBERON:0002405,6.20e-11,48;UBERON:0001041,3.87e-09,80;UBERON:0002368,4.68e-09,60;UBERON:0002370,7.92e-09,23;UBERON:0000974,7.92e-09,23;UBERON:0004807,7.92e-09,23;UBERON:0005058,7.92e-09,23;UBERON:0003351,7.92e-09,23;UBERON:0009113,7.92e-09,23;UBERON:0003295,7.92e-09,23;UBERON:0009722,7.92e-09,23;UBERON:0005562,7.92e-09,23;UBERON:0007690,7.92e-09,23;UBERON:0002106,2.15e-08,6;UBERON:0004457,2.15e-08,6;UBERON:0000042,2.15e-08,6;UBERON:0004854,2.15e-08,6;UBERON:0009034,2.15e-08,6;UBERON:0002095,2.15e-08,6;UBERON:0004782,2.15e-08,6;UBERON:0003281,2.15e-08,6;UBERON:0009664,2.15e-08,6;UBERON:0002296,2.15e-08,6;UBERON:0005602,2.15e-08,6;UBERON:0001179,2.15e-08,6;UBERON:0006293,2.15e-08,6;UBERON:0003081,2.39e-08,87;UBERON:0006562,2.39e-08,24;UBERON:0003408,2.39e-08,24;UBERON:0001557,2.39e-08,24;UBERON:0001042,2.39e-08,24;UBERON:0008814,2.39e-08,24;UBERON:0009145,2.39e-08,24;UBERON:0003929,2.55e-08,55;UBERON:0002530,5.91e-08,65;UBERON:0005172,3.75e-07,49;UBERON:0005173,3.75e-07,49;UBERON:0002417,3.75e-07,49;UBERON:0000916,3.75e-07,49;UBERON:0000072,3.97e-07,27;UBERON:0000358,5.49e-07,3;UBERON:0000307,5.49e-07,3;UBERON:0007010,5.49e-07,3;UBERON:0001048,6.52e-07,134;UBERON:0003887,7.66e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33176833270964,2.63217847606774,9.79386629379405,0.315462165358238,0.137114433605739,0,0.17008658030214,0.595745707205312,0,0,0,0,0,0,0.190023419456374,0.504060259519861,0,0.635030673459631,0.61506478758457,0,0,0,0.612508068787107,0.418531630736908,0.7813353445238,0,0,0,0,0.503587271902309,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.933206510776299,0.540023753326763,0.841299845405528,0,0,0.489963196859816,0.670918297127655,1.83843757322004,0,0,0,0,0.274462930807229,0,0,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0.151143120213571,0,0,2.03991400112325,0,0,0.448026887097336,0.140444420131752,0.340860645156116,0.519572009205738,0,0,0,0,0,0.649473123033642,0.253359865475099,0,0.45673551887624,0.517875767294343,0.148442139064825,1.56136794089522,0.304465478312141,0,0.150722640552623,0.940709657085638,0,0.247194967734374,0,0.884610551949874,0.485300549842228,1.54589062922275,2.42437626567611,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0.251308704225729,0,0,0,0,0.203678727700633,3.35898820647251,0,0,1.30120442962704,0,0.180062129805349,0,0.816437989815934,0.12811372028485,0.468508622798644,0,3.01795190105979,0,0.351902248327898,0,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.938104239924385,0.720248245844059,1.18372367792605,0.787056926989615,0.462801338662135,0.697601834251224,0,0.934122738937356,0.493679549740441,0,0.0810688095458557,0,0.219550115291051,0,0,0.102904612379284,0,0,1.2797295032114,0.232236671860439,0,0.403367049246685,0,0,0,0.329397909448022,0,0.795825888164603,0,0,0.216138049874694,0,2.84501851429623,0.799739588268102,2.25415471346161,0.203651327845314,0.387904974335251,0.420814919341911,0.189709611372772,0,0.156998727841375,0.246794327843601,0,2.00214126859313,1.57247196090562,2.69834534861824,2.02860121388503,0.72353147925725,0.25462585178142,0.575392274901621,7.7824908852017,1.09824565275233,0,1.86070473834252,0,0,0.538192240565737,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,0,1.10344600874334,0.8858587585951,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0,0,0.163934945376675,0.252470927204373,1.26203287766503,0,1.07711698866399,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0.141940085208269,0.534196811001766,0,0.164970122972535,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,0.540183282093931,1.16422815404479,0.214337035031592,0,0,0.329098041204242,0.304464949114599,8.44818149029357,0.42366414172764,0,0.16488625294148,0.968786560175433,0.120625849856312,0,0,0,0,2.9048049735635,0.82554747185289,1.29636169158798,3.01389531207506,15.8565304156389,5.49067615695654,0.169978429993855,0,0,0,0.790839983952838,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0,0.165306911450672,0,0.388844919875379,0,0,1.04661582230785,0.165458490457098,0,0,0.168956125490778,0.469428954583016,0,0.209718688851422,0.241584120826006,0,1.89606672376907,0.405450430580328,1.84879722896689,2.46849563657811,2.14832034800978,1.78813219303138,0.841368146639782,2.21534290761866,2.92802704849628,2.362411006305,2.11734988787365,1.26695244961678,1.73181314952593,1.75315353272353,0,2.44184548711471,5.65197296639697,3.18980771091749,0,1.50145980360946,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,1.99512436700516,0.682934423016537,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.526139422875686,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0|short_description=p4@Rrm2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20135
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:F6RUC3
|association_with_transcript=-24bp_to_ENSMUST00000154588_5end
|cluster_id=chr12:25393849..25393869,+
|description=CAGE_peak_4_at_Rrm2_5end
|id=chr12:25393849..25393869,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000349,5.49e-07,3;CL:0000351,5.49e-07,3;CL:0002027,7.48e-07,3;CL:0002006,7.48e-07,3;CL:0002024,7.48e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.03e-14,29;UBERON:0005057,1.03e-14,29;UBERON:0000077,3.18e-13,35;UBERON:0002390,5.22e-12,45;UBERON:0003061,5.22e-12,45;UBERON:0002193,6.20e-11,48;UBERON:0002405,6.20e-11,48;UBERON:0001041,3.87e-09,80;UBERON:0002368,4.68e-09,60;UBERON:0002370,7.92e-09,23;UBERON:0000974,7.92e-09,23;UBERON:0004807,7.92e-09,23;UBERON:0005058,7.92e-09,23;UBERON:0003351,7.92e-09,23;UBERON:0009113,7.92e-09,23;UBERON:0003295,7.92e-09,23;UBERON:0009722,7.92e-09,23;UBERON:0005562,7.92e-09,23;UBERON:0007690,7.92e-09,23;UBERON:0002106,2.15e-08,6;UBERON:0004457,2.15e-08,6;UBERON:0000042,2.15e-08,6;UBERON:0004854,2.15e-08,6;UBERON:0009034,2.15e-08,6;UBERON:0002095,2.15e-08,6;UBERON:0004782,2.15e-08,6;UBERON:0003281,2.15e-08,6;UBERON:0009664,2.15e-08,6;UBERON:0002296,2.15e-08,6;UBERON:0005602,2.15e-08,6;UBERON:0001179,2.15e-08,6;UBERON:0006293,2.15e-08,6;UBERON:0003081,2.39e-08,87;UBERON:0006562,2.39e-08,24;UBERON:0003408,2.39e-08,24;UBERON:0001557,2.39e-08,24;UBERON:0001042,2.39e-08,24;UBERON:0008814,2.39e-08,24;UBERON:0009145,2.39e-08,24;UBERON:0003929,2.55e-08,55;UBERON:0002530,5.91e-08,65;UBERON:0005172,3.75e-07,49;UBERON:0005173,3.75e-07,49;UBERON:0002417,3.75e-07,49;UBERON:0000916,3.75e-07,49;UBERON:0000072,3.97e-07,27;UBERON:0000358,5.49e-07,3;UBERON:0000307,5.49e-07,3;UBERON:0007010,5.49e-07,3;UBERON:0001048,6.52e-07,134;UBERON:0003887,7.66e-07,10
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33176833270964,2.63217847606774,9.79386629379405,0.315462165358238,0.137114433605739,0,0.17008658030214,0.595745707205312,0,0,0,0,0,0,0.190023419456374,0.504060259519861,0,0.635030673459631,0.61506478758457,0,0,0,0.612508068787107,0.418531630736908,0.7813353445238,0,0,0,0,0.503587271902309,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.933206510776299,0.540023753326763,0.841299845405528,0,0,0.489963196859816,0.670918297127655,1.83843757322004,0,0,0,0,0.274462930807229,0,0,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0.151143120213571,0,0,2.03991400112325,0,0,0.448026887097336,0.140444420131752,0.340860645156116,0.519572009205738,0,0,0,0,0,0.649473123033642,0.253359865475099,0,0.45673551887624,0.517875767294343,0.148442139064825,1.56136794089522,0.304465478312141,0,0.150722640552623,0.940709657085638,0,0.247194967734374,0,0.884610551949874,0.485300549842228,1.54589062922275,2.42437626567611,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0.251308704225729,0,0,0,0,0.203678727700633,3.35898820647251,0,0,1.30120442962704,0,0.180062129805349,0,0.816437989815934,0.12811372028485,0.468508622798644,0,3.01795190105979,0,0.351902248327898,0,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.938104239924385,0.720248245844059,1.18372367792605,0.787056926989615,0.462801338662135,0.697601834251224,0,0.934122738937356,0.493679549740441,0,0.0810688095458557,0,0.219550115291051,0,0,0.102904612379284,0,0,1.2797295032114,0.232236671860439,0,0.403367049246685,0,0,0,0.329397909448022,0,0.795825888164603,0,0,0.216138049874694,0,2.84501851429623,0.799739588268102,2.25415471346161,0.203651327845314,0.387904974335251,0.420814919341911,0.189709611372772,0,0.156998727841375,0.246794327843601,0,2.00214126859313,1.57247196090562,2.69834534861824,2.02860121388503,0.72353147925725,0.25462585178142,0.575392274901621,7.7824908852017,1.09824565275233,0,1.86070473834252,0,0,0.538192240565737,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,0,1.10344600874334,0.8858587585951,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0,0,0.163934945376675,0.252470927204373,1.26203287766503,0,1.07711698866399,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0.141940085208269,0.534196811001766,0,0.164970122972535,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,0.540183282093931,1.16422815404479,0.214337035031592,0,0,0.329098041204242,0.304464949114599,8.44818149029357,0.42366414172764,0,0.16488625294148,0.968786560175433,0.120625849856312,0,0,0,0,2.9048049735635,0.82554747185289,1.29636169158798,3.01389531207506,15.8565304156389,5.49067615695654,0.169978429993855,0,0,0,0.790839983952838,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0,0.165306911450672,0,0.388844919875379,0,0,1.04661582230785,0.165458490457098,0,0,0.168956125490778,0.469428954583016,0,0.209718688851422,0.241584120826006,0,1.89606672376907,0.405450430580328,1.84879722896689,2.46849563657811,2.14832034800978,1.78813219303138,0.841368146639782,2.21534290761866,2.92802704849628,2.362411006305,2.11734988787365,1.26695244961678,1.73181314952593,1.75315353272353,0,2.44184548711471,5.65197296639697,3.18980771091749,0,1.50145980360946,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,1.99512436700516,0.682934423016537,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.526139422875686,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0
|short_description=p4@Rrm2
}}

Revision as of 22:08, 4 August 2015

Short description:p4@Rrm2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rrm2_5end
Coexpression cluster:NA
Association with transcript: -24bp_to_ENSMUST00000154588_5end
EntrezGene:20135
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Rrm2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.36
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F47.78
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I78.45
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H115.86
spleen, neonate N25.CNhs11099.1354-25G35.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.03e-1429
immune organ1.03e-1429
mixed endoderm/mesoderm-derived structure3.18e-1335
hematopoietic system5.22e-1245
blood island5.22e-1245
hemolymphoid system6.20e-1148
immune system6.20e-1148
foregut3.87e-0980
endocrine gland4.68e-0960
thymus7.92e-0923
neck7.92e-0923
respiratory system epithelium7.92e-0923
hemolymphoid system gland7.92e-0923
pharyngeal epithelium7.92e-0923
thymic region7.92e-0923
pharyngeal gland7.92e-0923
entire pharyngeal arch endoderm7.92e-0923
thymus primordium7.92e-0923
early pharyngeal endoderm7.92e-0923
spleen2.15e-086
cavity lining2.15e-086
serous membrane2.15e-086
gastrointestinal system mesentery2.15e-086
stomach region2.15e-086
mesentery2.15e-086
gastrointestinal system serosa2.15e-086
mesentery of stomach2.15e-086
gut mesentery2.15e-086
dorsal mesentery2.15e-086
dorsal mesogastrium2.15e-086
peritoneal cavity2.15e-086
spleen primordium2.15e-086
lateral plate mesoderm2.39e-0887
pharynx2.39e-0824
gland of gut2.39e-0824
upper respiratory tract2.39e-0824
chordate pharynx2.39e-0824
pharyngeal arch system2.39e-0824
pharyngeal region of foregut2.39e-0824
gut epithelium2.55e-0855
gland5.91e-0865
abdomen element3.75e-0749
abdominal segment element3.75e-0749
abdominal segment of trunk3.75e-0749
abdomen3.75e-0749
segment of respiratory tract3.97e-0727
blastocyst5.49e-073
blastula5.49e-073
cleaving embryo5.49e-073
primordium6.52e-07134
intraembryonic coelom7.66e-0710
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