FFCP PHASE1:Mm9::chr11:115015516..115015524,+: Difference between revisions
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{{FFCP|EntrezGene=58222|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000156383_5end|description=CAGE_peak_2_at_Rab37_5end|id=chr11:115015516..115015524,+|ontology_enrichment_celltype=CL:0000838!4.04e-09!12;CL:0000084!6.17e-09!11;CL:0000827!6.17e-09!11;CL:0000542!4.05e-08!13;CL:0000051!4.05e-08!13;CL:0002031!2.14e-07!25;CL:0000791!4.77e-07!9;CL:0000789!4.77e-07!9;CL:0002420!4.77e-07!9;CL:0002419!4.77e-07!9;CL:0000790!4.77e-07!9|ontology_enrichment_celltype_v019_2=CL:0000084,2.00e-20,11;CL:0000827,2.00e-20,11;CL:0000838,1.42e-18,12;CL:0000542,5.21e-17,13;CL:0000051,5.21e-17,13;CL:0000791,2.35e-15,9;CL:0000789,2.35e-15,9;CL:0002420,2.35e-15,9;CL:0002419,2.35e-15,9;CL:0000790,2.35e-15,9;CL:0000624,8.72e-13,8;CL:0000738,1.37e-12,17;CL:0002087,1.37e-12,17;CL:0002610,2.74e-08,3;CL:0002031,5.27e-08,25;CL:0000893,7.10e-08,6;CL:0002489,7.10e-08,6;CL:0000898,7.10e-08,6;CL:0000809,7.10e-08,6;CL:0000810,7.10e-08,6;CL:0000895,7.10e-08,6;CL:0000808,7.10e-08,6;CL:0000894,7.10e-08,6;CL:0000806,7.10e-08,6;CL:0000807,7.10e-08,6;CL:0000805,7.10e-08,6;CL:0002425,7.10e-08,6;CL:0002436,7.10e-08,6;CL:0002427,7.10e-08,6;CL:0002428,7.10e-08,6;CL:0002429,7.10e-08,6;CL:0002433,7.10e-08,6;CL:0002431,7.10e-08,6;CL:0002432,7.10e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.03e-09,3;DOID:4045,5.03e-09,3|ontology_enrichment_uberon=UBERON:0002370!8.60e-11!23;UBERON:0000974!8.60e-11!23;UBERON:0004807!8.60e-11!23;UBERON:0005058!8.60e-11!23;UBERON:0003351!8.60e-11!23;UBERON:0009113!8.60e-11!23;UBERON:0003295!8.60e-11!23;UBERON:0009722!8.60e-11!23;UBERON:0005562!8.60e-11!23;UBERON:0007690!8.60e-11!23;UBERON:0004177!9.68e-11!29;UBERON:0002193!1.87e-10!48;UBERON:0006562!4.62e-10!24;UBERON:0003408!4.62e-10!24;UBERON:0001557!4.62e-10!24;UBERON:0001042!4.62e-10!24;UBERON:0008814!4.62e-10!24;UBERON:0009145!4.62e-10!24;UBERON:0002390!6.76e-09!45;UBERON:0003061!6.76e-09!45;UBERON:0000072!3.20e-08!27;UBERON:0000063!4.36e-08!35;UBERON:0002405!2.54e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.70e-09,23;UBERON:0000974,1.70e-09,23;UBERON:0004807,1.70e-09,23;UBERON:0005058,1.70e-09,23;UBERON:0003351,1.70e-09,23;UBERON:0009113,1.70e-09,23;UBERON:0003295,1.70e-09,23;UBERON:0009722,1.70e-09,23;UBERON:0005562,1.70e-09,23;UBERON:0007690,1.70e-09,23;UBERON:0006562,5.04e-09,24;UBERON:0003408,5.04e-09,24;UBERON:0001557,5.04e-09,24;UBERON:0001042,5.04e-09,24;UBERON:0008814,5.04e-09,24;UBERON:0009145,5.04e-09,24;UBERON:0004684,2.74e-08,3;UBERON:0002275,2.74e-08,3;UBERON:0000072,8.06e-08,27;UBERON:0004177,3.71e-07,29;UBERON:0005057,3.71e-07,29|phase1_expression=0.160148847104794,0,0.454999239389536,0.90739263392049,0.500895729946347,0.16787927191189,0,4.13194635013044,1.12630977721333,4.21316147379588,0,0.0797721589953364,3.0816131387617,1.83582845079895,0,0.404950534779652,0.699561878128147,0.473193248037357,0.685572168028694,0.84877930359606,0,2.18440092641948,2.61199789138935,0.639969691173627,0.22940928106717,0,0,0,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0,0,2.51118978442145,1.5626706890476,1.57057123192139,1.76469446409304,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,1.53224805702225,1.53606533256243,0,0,0,1.11673199600552,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0.220841518460394,0,0,0,0.209446706813455,0.766371165625774,0.479260498023681,0,0.635351135365324,0.149790639404823,0,0,0,0,0.83115217823824,0.648965052271031,0,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0.403367049246685,0,0,0,0,0,0.397912944082302,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0,1.60660658210904,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,1.55056975900933,1.09060118843252,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0.492422699235184,0,1.11255181206306,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0.228778173206523,1.35982743995084,0.839708713941948,1.38199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,1.02710957164827,1.03936658382236,0.537080087002444,0.39736270956253,1.08175904567972,1.32920574457119,1.11063094942962,0.685861259894999,0.705783295957884,0.682205165178267,0.577271049841977,1.16876902181569,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p2@Rab37}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:58222 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000156383_5end | |||
|cluster_id=chr11:115015516..115015524,+ | |||
|description=CAGE_peak_2_at_Rab37_5end | |||
|id=chr11:115015516..115015524,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.04e-09!12;CL:0000084!6.17e-09!11;CL:0000827!6.17e-09!11;CL:0000542!4.05e-08!13;CL:0000051!4.05e-08!13;CL:0002031!2.14e-07!25;CL:0000791!4.77e-07!9;CL:0000789!4.77e-07!9;CL:0002420!4.77e-07!9;CL:0002419!4.77e-07!9;CL:0000790!4.77e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.00e-20,11;CL:0000827,2.00e-20,11;CL:0000838,1.42e-18,12;CL:0000542,5.21e-17,13;CL:0000051,5.21e-17,13;CL:0000791,2.35e-15,9;CL:0000789,2.35e-15,9;CL:0002420,2.35e-15,9;CL:0002419,2.35e-15,9;CL:0000790,2.35e-15,9;CL:0000624,8.72e-13,8;CL:0000738,1.37e-12,17;CL:0002087,1.37e-12,17;CL:0002610,2.74e-08,3;CL:0002031,5.27e-08,25;CL:0000893,7.10e-08,6;CL:0002489,7.10e-08,6;CL:0000898,7.10e-08,6;CL:0000809,7.10e-08,6;CL:0000810,7.10e-08,6;CL:0000895,7.10e-08,6;CL:0000808,7.10e-08,6;CL:0000894,7.10e-08,6;CL:0000806,7.10e-08,6;CL:0000807,7.10e-08,6;CL:0000805,7.10e-08,6;CL:0002425,7.10e-08,6;CL:0002436,7.10e-08,6;CL:0002427,7.10e-08,6;CL:0002428,7.10e-08,6;CL:0002429,7.10e-08,6;CL:0002433,7.10e-08,6;CL:0002431,7.10e-08,6;CL:0002432,7.10e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.03e-09,3;DOID:4045,5.03e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002370!8.60e-11!23;UBERON:0000974!8.60e-11!23;UBERON:0004807!8.60e-11!23;UBERON:0005058!8.60e-11!23;UBERON:0003351!8.60e-11!23;UBERON:0009113!8.60e-11!23;UBERON:0003295!8.60e-11!23;UBERON:0009722!8.60e-11!23;UBERON:0005562!8.60e-11!23;UBERON:0007690!8.60e-11!23;UBERON:0004177!9.68e-11!29;UBERON:0002193!1.87e-10!48;UBERON:0006562!4.62e-10!24;UBERON:0003408!4.62e-10!24;UBERON:0001557!4.62e-10!24;UBERON:0001042!4.62e-10!24;UBERON:0008814!4.62e-10!24;UBERON:0009145!4.62e-10!24;UBERON:0002390!6.76e-09!45;UBERON:0003061!6.76e-09!45;UBERON:0000072!3.20e-08!27;UBERON:0000063!4.36e-08!35;UBERON:0002405!2.54e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.70e-09,23;UBERON:0000974,1.70e-09,23;UBERON:0004807,1.70e-09,23;UBERON:0005058,1.70e-09,23;UBERON:0003351,1.70e-09,23;UBERON:0009113,1.70e-09,23;UBERON:0003295,1.70e-09,23;UBERON:0009722,1.70e-09,23;UBERON:0005562,1.70e-09,23;UBERON:0007690,1.70e-09,23;UBERON:0006562,5.04e-09,24;UBERON:0003408,5.04e-09,24;UBERON:0001557,5.04e-09,24;UBERON:0001042,5.04e-09,24;UBERON:0008814,5.04e-09,24;UBERON:0009145,5.04e-09,24;UBERON:0004684,2.74e-08,3;UBERON:0002275,2.74e-08,3;UBERON:0000072,8.06e-08,27;UBERON:0004177,3.71e-07,29;UBERON:0005057,3.71e-07,29 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0.90739263392049,0.500895729946347,0.16787927191189,0,4.13194635013044,1.12630977721333,4.21316147379588,0,0.0797721589953364,3.0816131387617,1.83582845079895,0,0.404950534779652,0.699561878128147,0.473193248037357,0.685572168028694,0.84877930359606,0,2.18440092641948,2.61199789138935,0.639969691173627,0.22940928106717,0,0,0,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0,0,2.51118978442145,1.5626706890476,1.57057123192139,1.76469446409304,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,1.53224805702225,1.53606533256243,0,0,0,1.11673199600552,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0.220841518460394,0,0,0,0.209446706813455,0.766371165625774,0.479260498023681,0,0.635351135365324,0.149790639404823,0,0,0,0,0.83115217823824,0.648965052271031,0,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0.403367049246685,0,0,0,0,0,0.397912944082302,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0,1.60660658210904,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,1.55056975900933,1.09060118843252,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0.492422699235184,0,1.11255181206306,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0.228778173206523,1.35982743995084,0.839708713941948,1.38199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,1.02710957164827,1.03936658382236,0.537080087002444,0.39736270956253,1.08175904567972,1.32920574457119,1.11063094942962,0.685861259894999,0.705783295957884,0.682205165178267,0.577271049841977,1.16876902181569,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Rab37 | |||
}} |
Revision as of 10:37, 5 August 2015
Short description: | p2@Rab37 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rab37_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000156383_5end |
EntrezGene: | 58222 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.70e-09 | 23 |
neck | 1.70e-09 | 23 |
respiratory system epithelium | 1.70e-09 | 23 |
hemolymphoid system gland | 1.70e-09 | 23 |
pharyngeal epithelium | 1.70e-09 | 23 |
thymic region | 1.70e-09 | 23 |
pharyngeal gland | 1.70e-09 | 23 |
entire pharyngeal arch endoderm | 1.70e-09 | 23 |
thymus primordium | 1.70e-09 | 23 |
early pharyngeal endoderm | 1.70e-09 | 23 |
pharynx | 5.04e-09 | 24 |
gland of gut | 5.04e-09 | 24 |
upper respiratory tract | 5.04e-09 | 24 |
chordate pharynx | 5.04e-09 | 24 |
pharyngeal arch system | 5.04e-09 | 24 |
pharyngeal region of foregut | 5.04e-09 | 24 |
raphe nuclei | 2.74e-08 | 3 |
reticular formation | 2.74e-08 | 3 |
segment of respiratory tract | 8.06e-08 | 27 |
hemopoietic organ | 3.71e-07 | 29 |
immune organ | 3.71e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.03e-09 | 3 |
muscle cancer | 5.03e-09 | 3 |