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FFCP PHASE1:Mm9::chr15:76077177..76077236,+: Difference between revisions

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{{FFCP|EntrezGene=66168|HGNC=|MCL_coexpression_id=3001|UniProt=Q9ESF4|association_with_transcript=0bp_to_ENSMUST00000023225,NM_023168,uc007wjl.1_5end|description=CAGE_peak_1_at_Grina_5end|id=chr15:76077177..76077236,+|ontology_enrichment_celltype=CL:0000055!8.53e-11!50;CL:0002319!1.44e-08!43;CL:0000221!4.51e-08!44;CL:0000133!4.51e-08!44;CL:0002321!1.62e-07!70;CL:0000220!1.62e-07!70;CL:0000393!6.91e-07!39;CL:0000211!6.91e-07!39|ontology_enrichment_celltype_v019_2=CL:0002319,1.44e-08,43;CL:0000221,4.51e-08,44;CL:0000133,4.51e-08,44;CL:0002321,1.62e-07,70;CL:0000393,6.91e-07,39;CL:0000211,6.91e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.47e-14!75;UBERON:0001016!1.47e-14!75;UBERON:0001017!3.12e-14!73;UBERON:0005743!3.12e-14!73;UBERON:0004121!1.49e-11!102;UBERON:0000924!1.49e-11!102;UBERON:0006601!1.49e-11!102;UBERON:0000955!1.38e-09!50;UBERON:0006238!1.38e-09!50;UBERON:0001049!1.95e-09!52;UBERON:0005068!1.95e-09!52;UBERON:0006241!1.95e-09!52;UBERON:0007135!1.95e-09!52;UBERON:0002616!2.87e-09!49;UBERON:0002020!1.21e-08!34;UBERON:0002346!7.08e-08!71;UBERON:0003075!7.08e-08!71;UBERON:0007284!7.08e-08!71;UBERON:0002791!8.16e-08!29;UBERON:0003528!8.16e-08!29;UBERON:0001893!8.16e-08!29;UBERON:0000033!2.05e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.47e-14,75;UBERON:0001017,3.12e-14,73;UBERON:0004121,5.84e-12,95;UBERON:0000924,5.84e-12,95;UBERON:0006601,5.84e-12,95;UBERON:0000073,3.45e-10,54;UBERON:0001049,1.95e-09,52;UBERON:0005068,1.95e-09,52;UBERON:0006241,1.95e-09,52;UBERON:0007135,1.95e-09,52;UBERON:0002020,1.21e-08,34;UBERON:0000955,2.36e-08,47;UBERON:0006238,2.36e-08,47;UBERON:0002346,2.41e-08,64;UBERON:0003075,2.41e-08,64;UBERON:0007284,2.41e-08,64;UBERON:0002616,4.77e-08,46;UBERON:0003528,8.16e-08,29;UBERON:0002791,8.16e-08,29;UBERON:0001893,8.16e-08,29;UBERON:0010371,7.96e-07,73|phase1_expression=73.3481719739956,356.652866607427,302.119494954652,342.691951410638,413.739872935683,42.3055765217962,49.759492446847,84.9631468245572,37.7313775366467,47.0469697907207,27.0524389796298,24.9686857655403,69.5074963520695,87.6826636262544,460.357690829246,659.866896423443,1015.76384704207,80.7583143317088,71.8479632094071,94.6388923509607,374.190476664707,43.9858913819922,19.3287843962812,140.793332058198,164.715863806228,264.146703492909,149.474412667199,147.166851924462,262.04229543034,241.696894439774,107.761028178478,227.340981098548,211.582286929092,174.329849116983,10.9763615505484,20.2806267337361,12.8626694445293,1339.71974998884,925.882383260703,552.317549892357,1652.34224987912,1441.22597326232,1001.12234795024,560.618530445246,599.644548163429,404.537041764346,1374.6615920195,421.224602127023,783.400927631127,699.364346970197,279.272911142598,426.945116163966,51.5092600597251,92.8463541774521,71.2518854182024,281.18456358729,296.562110336613,355.298071579158,212.634600363437,211.596391708813,210.432025964051,321.902305465676,307.695999454454,865.253578166065,1045.23174523329,1008.17128310852,654.626241482714,852.964637813851,152.631109318079,189.143319602699,165.105094660835,296.220070826744,300.822952776098,131.555118356861,117.027320113267,175.570788242514,486.712194017298,478.444455805198,498.914020016279,201.786020227197,198.802649548036,183.882419806536,567.020670971805,357.354257370117,422.639953350657,234.229725451566,227.225202555368,204.480192070355,205.142257739596,251.502152035382,174.788286687112,209.083002106477,267.228734147146,250.961984111585,247.564815047562,240.142411484172,264.737731948352,180.315281287585,193.540573429137,199.636859598342,79.7173755936012,230.987659345772,226.776663338915,120.881339536066,73.3904629028016,73.2210011223035,89.9833512126314,275.525701762092,159.764674210305,231.718179080191,93.3351058001811,144.316636719955,144.365301282293,125.85340486144,173.796109146572,156.454906205446,237.059974057265,520.268486197842,507.766456819228,148.340201401774,291.73164588618,280.257896312158,108.107221506511,409.014773425131,422.454007642739,197.212846621033,22.7648736561249,31.7948447426506,27.1930285936358,498.653038578655,652.395859619361,225.675216394704,492.791947745104,503.503735483421,562.897812711848,501.325502879371,82.3880453549059,278.049579313558,183.982168139715,193.185623703783,57.9035971184031,70.1201418522092,94.5326181478083,98.7116556823934,152.469794598126,149.764939012989,188.153062915935,385.726725771872,45.9159824946954,53.5170206874929,64.0462091956774,75.6225276875133,77.2971352847162,91.2420676288076,95.0713470204699,45.180778567798,37.9195121149147,41.4330130454691,44.8978329045036,86.1643213747688,90.5270591527031,76.1662519980093,71.2601654111483,80.6733350164356,75.436618201928,85.8050256129005,75.1165523918934,94.4631619750401,74.3810521608932,89.3071004590278,110.902131458731,101.462791273181,118.557062257167,141.856184629713,664.93681735977,208.176030843292,345.618047001053,197.01567216434,37.3254438436659,48.0729910751108,46.5211535372757,71.3959677166633,110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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:66168
|HGNC=
|MCL_coexpression_id=3001
|TSSclassifier=NA
|UniProt=uniprot:Q9ESF4
|association_with_transcript=0bp_to_ENSMUST00000023225,NM_023168,uc007wjl.1_5end
|cluster_id=chr15:76077177..76077236,+
|description=CAGE_peak_1_at_Grina_5end
|id=chr15:76077177..76077236,+
|ontology_enrichment_celltype=CL:0000055!8.53e-11!50;CL:0002319!1.44e-08!43;CL:0000221!4.51e-08!44;CL:0000133!4.51e-08!44;CL:0002321!1.62e-07!70;CL:0000220!1.62e-07!70;CL:0000393!6.91e-07!39;CL:0000211!6.91e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002319,1.44e-08,43;CL:0000221,4.51e-08,44;CL:0000133,4.51e-08,44;CL:0002321,1.62e-07,70;CL:0000393,6.91e-07,39;CL:0000211,6.91e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.47e-14!75;UBERON:0001016!1.47e-14!75;UBERON:0001017!3.12e-14!73;UBERON:0005743!3.12e-14!73;UBERON:0004121!1.49e-11!102;UBERON:0000924!1.49e-11!102;UBERON:0006601!1.49e-11!102;UBERON:0000955!1.38e-09!50;UBERON:0006238!1.38e-09!50;UBERON:0001049!1.95e-09!52;UBERON:0005068!1.95e-09!52;UBERON:0006241!1.95e-09!52;UBERON:0007135!1.95e-09!52;UBERON:0002616!2.87e-09!49;UBERON:0002020!1.21e-08!34;UBERON:0002346!7.08e-08!71;UBERON:0003075!7.08e-08!71;UBERON:0007284!7.08e-08!71;UBERON:0002791!8.16e-08!29;UBERON:0003528!8.16e-08!29;UBERON:0001893!8.16e-08!29;UBERON:0000033!2.05e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.47e-14,75;UBERON:0001017,3.12e-14,73;UBERON:0004121,5.84e-12,95;UBERON:0000924,5.84e-12,95;UBERON:0006601,5.84e-12,95;UBERON:0000073,3.45e-10,54;UBERON:0001049,1.95e-09,52;UBERON:0005068,1.95e-09,52;UBERON:0006241,1.95e-09,52;UBERON:0007135,1.95e-09,52;UBERON:0002020,1.21e-08,34;UBERON:0000955,2.36e-08,47;UBERON:0006238,2.36e-08,47;UBERON:0002346,2.41e-08,64;UBERON:0003075,2.41e-08,64;UBERON:0007284,2.41e-08,64;UBERON:0002616,4.77e-08,46;UBERON:0003528,8.16e-08,29;UBERON:0002791,8.16e-08,29;UBERON:0001893,8.16e-08,29;UBERON:0010371,7.96e-07,73
|phase1_expression=73.3481719739956,356.652866607427,302.119494954652,342.691951410638,413.739872935683,42.3055765217962,49.759492446847,84.9631468245572,37.7313775366467,47.0469697907207,27.0524389796298,24.9686857655403,69.5074963520695,87.6826636262544,460.357690829246,659.866896423443,1015.76384704207,80.7583143317088,71.8479632094071,94.6388923509607,374.190476664707,43.9858913819922,19.3287843962812,140.793332058198,164.715863806228,264.146703492909,149.474412667199,147.166851924462,262.04229543034,241.696894439774,107.761028178478,227.340981098548,211.582286929092,174.329849116983,10.9763615505484,20.2806267337361,12.8626694445293,1339.71974998884,925.882383260703,552.317549892357,1652.34224987912,1441.22597326232,1001.12234795024,560.618530445246,599.644548163429,404.537041764346,1374.6615920195,421.224602127023,783.400927631127,699.364346970197,279.272911142598,426.945116163966,51.5092600597251,92.8463541774521,71.2518854182024,281.18456358729,296.562110336613,355.298071579158,212.634600363437,211.596391708813,210.432025964051,321.902305465676,307.695999454454,865.253578166065,1045.23174523329,1008.17128310852,654.626241482714,852.964637813851,152.631109318079,189.143319602699,165.105094660835,296.220070826744,300.822952776098,131.555118356861,117.027320113267,175.570788242514,486.712194017298,478.444455805198,498.914020016279,201.786020227197,198.802649548036,183.882419806536,567.020670971805,357.354257370117,422.639953350657,234.229725451566,227.225202555368,204.480192070355,205.142257739596,251.502152035382,174.788286687112,209.083002106477,267.228734147146,250.961984111585,247.564815047562,240.142411484172,264.737731948352,180.315281287585,193.540573429137,199.636859598342,79.7173755936012,230.987659345772,226.776663338915,120.881339536066,73.3904629028016,73.2210011223035,89.9833512126314,275.525701762092,159.764674210305,231.718179080191,93.3351058001811,144.316636719955,144.365301282293,125.85340486144,173.796109146572,156.454906205446,237.059974057265,520.268486197842,507.766456819228,148.340201401774,291.73164588618,280.257896312158,108.107221506511,409.014773425131,422.454007642739,197.212846621033,22.7648736561249,31.7948447426506,27.1930285936358,498.653038578655,652.395859619361,225.675216394704,492.791947745104,503.503735483421,562.897812711848,501.325502879371,82.3880453549059,278.049579313558,183.982168139715,193.185623703783,57.9035971184031,70.1201418522092,94.5326181478083,98.7116556823934,152.469794598126,149.764939012989,188.153062915935,385.726725771872,45.9159824946954,53.5170206874929,64.0462091956774,75.6225276875133,77.2971352847162,91.2420676288076,95.0713470204699,45.180778567798,37.9195121149147,41.4330130454691,44.8978329045036,86.1643213747688,90.5270591527031,76.1662519980093,71.2601654111483,80.6733350164356,75.436618201928,85.8050256129005,75.1165523918934,94.4631619750401,74.3810521608932,89.3071004590278,110.902131458731,101.462791273181,118.557062257167,141.856184629713,664.93681735977,208.176030843292,345.618047001053,197.01567216434,37.3254438436659,48.0729910751108,46.5211535372757,71.3959677166633,110.744265834745,157.316592795086,172.728578402202,220.531900375451,193.025440358607,217.061510996896,235.516617239897,179.763881730844,177.665476996999,188.387644498631,53.8656838706752,55.0677830778893,92.420343251926,84.7189523836507,118.311017172252,162.154015586417,227.208877887456,417.589108634295,384.175887027844,544.921875878671,329.358868693822,273.625973374394,319.604926054068,419.142977485367,556.648173090052,512.260287314133,458.071907354774,512.962213074795,364.155719336729,198.507901734983,142.330524462081,152.577788544086,122.630805534022,114.165652832095,172.042119567514,254.730179279858,169.418675382776,36.1928596481626,22.1632367961155,21.8971160649993,24.6424760702927,42.5465893902212,66.4141758071978,104.59163525178,80.7091937823698,83.2707233079394,82.9164797018933,130.107471884296,110.000333448575,139.007745296833,521.737842429882,467.75888808409,130.809296623064,165.01017429023,618.76197381295,536.009042786145,97.0494876629919,202.986625472316,211.390507008892,203.028147034252,229.425918585431,232.994578003738,252.430897735353,245.427352193918,251.792256441784,256.016131530309,278.677883452299,384.621615756903,142.791725719518,103.456115730675,98.38372344956,140.719514895573,134.072589723362,45.6427595971365,40.5113566332766,49.7917410555571,91.2482849001588,97.7643770461689,118.618586564214,74.5244145428886,72.3689678120984,94.494990622809,94.8767477174989,147.483826844907,123.920016494379,58.1597333721132,82.0134055182664,69.0165252801727,69.1626911204867,92.0383098826684,88.6919221045432,175.371810690009,167.555599557489,188.742375139664,125.701186891328,210.394858753329,162.110284402689,94.3294145876358,105.525152098773,103.080485039898,165.852596042385,659.186948647362,492.791620221007,124.24489451386,270.01362090504,571.321530095228,467.084176122743,469.452811419784,49.293744698218,53.7413576922847,59.8405886573155,111.696462307768,39.3838312008513,47.7800747748094,42.2300882613243,46.2085134191976,57.2109917014985,73.3662044333425,92.1586031337496,68.8418127417998,139.854556181845,271.525279818987,572.712025703137,43.8083479908858,45.9974603470731,68.6412694854488,67.0339483849424,69.7788798276914,94.942006064415,63.8001485735356,65.3273715772179,152.197996120384,294.942726408054,86.903058172749,47.2349751626083,46.0145088098426,47.1612587409396,50.4855281782298,50.4650641144413,55.7706885772655,51.691334511102,58.4595745199775,61.6513065838949,61.4031467483359,77.0891836651442,55.3218089431894,82.164462233643,148.961862035194,76.3631679606783,26.4655876997953,60.2705772747042,169.234084372199,227.283477771381,101.832303092599,134.837710440732,160.001501187281,431.470407759439,435.007348499282,414.776351730123,468.299921886549,399.403109026284,420.754400846063,397.588252636534,422.851609827543,420.063013128358,452.522512471091,24.078664639529,119.707462020309,104.318233115776,163.85392730403,86.9894624906127,81.0749872264562,135.570503958985,143.194364781031,137.995260124481,134.687613870104,135.104466841498,134.679207749658,134.188280204342,132.083889411245,138.419480183028,132.409646176694,136.627620288985,135.808091206448,106.730248308056,127.179866996119,137.833439458937,124.055588505377,118.741222593766,126.306036053493,120.177678790377,117.529690361539,120.183678177412,127.062670624478,128.063279356648,164.975827867375,138.209796114663,134.360113960269,127.270854425773,124.414283472331,154.711102006875,155.881800633278,148.078708145944,185.64859069773,196.83569369884,196.105771597249,151.409696660135
|short_description=p1@Grina
}}

Revision as of 12:24, 5 August 2015

Short description:p1@Grina
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grina_5end
Coexpression cluster:MCL_coexpression_mm9:3001
Association with transcript: 0bp_to_ENSMUST00000023225, NM_023168, uc007wjl.1_5end
EntrezGene:66168
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grina

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G773.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5356.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6302.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I3342.69
CD326+ enterocyte, pool2.CNhs13197.11849-124I4413.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I742.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I849.76
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E984.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E737.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F247.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E627.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.97
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E469.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E887.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1460.36
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3659.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51015.76
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A280.76
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A471.85
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A694.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3374.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H243.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.33
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1140.79
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2164.72
GP2+ M cell, pool1.CNhs13228.11845-124H9264.15
GP2+ M cell, pool2.CNhs13231.11846-124I1149.47
GP2+ M cell, pool3.CNhs13240.11847-124I2147.17
Ileum epithelium, pool1.CNhs13199.10252-104B9262.04
Ileum epithelium, pool2.CNhs13232.10253-104C1241.70
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8107.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3227.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6211.58
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9174.33
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.98
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F620.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81339.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1925.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3552.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91652.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21441.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41001.12
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8560.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9599.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3404.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71374.66
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2421.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8783.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3699.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C4279.27
Mouse Astrocytes, donor3.CNhs12107.11633-122C4426.95
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A251.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I992.85
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A171.25
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1281.18
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1296.56
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5355.30
Mouse Granule cells, donor1.CNhs12131.11713-123C3212.63
Mouse Granule cells, donor2.CNhs12357.11731-123E3211.60
Mouse Granule cells, donor3.CNhs12108.11636-122C7210.43
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6321.90
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1307.70
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7865.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71045.23
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21008.17
Mouse Microglia, donor1.CNhs12629.11718-123C8654.63
Mouse Microglia, donor2.CNhs12634.11736-123E8852.96
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5152.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5189.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9165.11
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1296.22
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5300.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2131.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2117.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6175.57
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3486.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3478.44
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7498.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4201.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4198.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8183.88
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4567.02
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5357.35
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6422.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6234.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6227.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1204.48
Mouse Schwann, donor1.CNhs12507.11728-123D9205.14
Mouse Schwann, donor2.CNhs12573.11746-123F9251.50
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3174.79
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7209.08
Mouse hepatocyte, donor1.CNhs13078.11714-123C4267.23
Mouse hepatocyte, donor3.CNhs12615.11637-122C8250.96
Mouse hepatocyte, donor6.CNhs13090.11822-124F4247.56
Mouse hepatocyte, donor8.CNhs13091.11824-124F6240.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7264.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7180.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3193.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8199.64
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G679.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1230.99
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8226.78
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6120.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G173.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G273.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G389.98
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6275.53
accessory axillary lymph node, adult.CNhs10475.1063-29H9159.76
adrenal gland, adult.CNhs10508.49-24D7231.72
adrenal gland, embryo E14.CNhs11038.406-44C593.34
adrenal gland, embryo E16.CNhs11004.1254-43D6144.32
adrenal gland, embryo E17.CNhs11043.1263-45I1144.37
adrenal gland, embryo E18.CNhs11026.1262-18F5125.85
adrenal gland, neonate N00.CNhs11191.1311-23C1173.80
adrenal gland, neonate N25.CNhs11223.1377-27I3156.45
amnion, adult pregnant day17.5.CNhs10488.583-22A8237.06
aorta, adult.CNhs10498.46-23H1520.27
bone (os femoris), adult.CNhs10483.56-12G2507.77
bone (os femoris), neonate N02.CNhs11227.1985-43F5148.34
bone (os femoris), neonate N16.CNhs11225.1525-43A6291.73
bone (os femoris), neonate N20.CNhs11195.1350-25C3280.26
cecum, adult.CNhs10467.37-13H4108.11
cerebellum, adult.CNhs10494.15-8B2409.01
cerebellum, neonate N30.CNhs11135.1395-42I2422.45
colon, adult.CNhs10468.36-18H7197.21
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D131.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D427.19
corpora quadrigemina, adult.CNhs10501.16-22A4498.65
corpus striatum, adult.CNhs10487.19-21D8652.40
corpus striatum, neonate N00.CNhs11226.630-43F1225.68
cortex, adult.CNhs10473.12-14D5492.79
cortex, neonate N30.CNhs11107.1392-42F2503.50
diencephalon, adult.CNhs10482.20-12F2562.90
diencephalon, neonate N30.CNhs11201.1388-42B2501.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B182.39
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2278.05
epididymis, adult.CNhs10490.58-23B2183.98
eyeball, adult.CNhs10484.31-12G4193.19
eyeball, embryo E12.CNhs11016.345-16C657.90
eyeball, embryo E14.CNhs10521.399-16E270.12
eyeball, embryo E15.CNhs10593.426-16C994.53
eyeball, embryo E17.CNhs11023.1261-18D498.71
eyeball, neonate N00.CNhs11207.633-15C6152.47
eyeball, neonate N01.CNhs11140.1532-43E7149.76
eyeball, neonate N02.CNhs11205.1551-44G8188.15
eyeball, neonate N16.CNhs11188.777-19A2385.73
forelimb, embryo E11.CNhs10596.335-25E245.92
forelimb, embryo E12.CNhs10600.359-14H253.52
forelimb, embryo E13.CNhs10589.384-1E264.05
forelimb, embryo E14.CNhs10577.413-26A875.62
forelimb, embryo E15.CNhs11007.437-20E777.30
forelimb, embryo E17.CNhs10598.1517-43C491.24
forelimb, embryo E18.CNhs11008.1520-43B595.07
gonad, embryo E13.CNhs11044.1564-45I645.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C837.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D241.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D544.90
heart, embryo E11.CNhs10586.331-24E986.16
heart, embryo E12.CNhs11015.353-12F590.53
heart, embryo E13.CNhs11013.376-3I976.17
heart, embryo E14.CNhs10597.403-26D471.26
heart, embryo E15.CNhs11017.431-16C880.67
heart, embryo E16.CNhs11021.457-17C675.44
heart, embryo E17.CNhs11025.479-18E585.81
heart, embryo E18.CNhs11030.1283-20G375.12
heart, neonate N00.CNhs11213.639-21E394.46
heart, neonate N03.CNhs11221.1349-25I274.38
heart, neonate N10.CNhs11118.749-24G189.31
heart, neonate N16.CNhs11209.782-15G1110.90
heart, neonate N20.CNhs11127.821-26I6101.46
heart, neonate N25.CNhs11196.1351-25D3118.56
heart, neonate N30.CNhs11202.1390-42D2141.86
hippocampus, adult.CNhs10478.13-16E8664.94
hippocampus, neonate N00.CNhs11228.627-43G1208.18
intestinal mucosa, adult.CNhs10506.860-29I3345.62
intestine, adult.CNhs10496.178-9A3197.02
intestine, embryo E12.CNhs11019.1251-16I537.33
intestine, embryo E13.CNhs11010.381-16D548.07
intestine, embryo E15.CNhs10602.976-16D846.52
intestine, embryo E16.CNhs10585.463-22H471.40
intestine, embryo E17.CNhs10582.482-18D3110.74
intestine, embryo E18.CNhs10526.1289-20F7157.32
intestine, neonate N00.CNhs11126.644-26D1172.73
intestine, neonate N01.CNhs11192.1322-23E9220.53
intestine, neonate N06.CNhs11102.688-20B8193.03
intestine, neonate N07.CNhs11095.720-20F2217.06
intestine, neonate N10.CNhs11098.755-23A5235.52
intestine, neonate N20.CNhs11187.827-18D1179.76
intestine, neonate N25.CNhs11121.1352-25E3177.67
intestine, neonate N30.CNhs11131.1384-42G1188.39
kidney, embryo E14.CNhs10606.411-4I953.87
kidney, embryo E15.CNhs10997.434-16F855.07
kidney, embryo E16.CNhs10584.464-22A592.42
kidney, embryo E17.CNhs11028.483-18I284.72
kidney, embryo E18.CNhs11001.1288-20C7118.31
kidney, neonate N00.CNhs11214.646-21G7162.15
kidney, neonate N10.CNhs11206.758-6D5227.21
kidney, neonate N20.CNhs11113.832-19I1417.59
kidney, neonate N25.CNhs11122.1353-25F3384.18
kidney, neonate N30.CNhs11203.1385-42H1544.92
liver, adult pregnant day01.CNhs10466.508-5B2329.36
liver, embryo E12.CNhs10601.355-15F8273.63
liver, embryo E13.CNhs10524.378-3H6319.60
liver, embryo E14.CNhs10594.409-16E1419.14
liver, embryo E15.CNhs10520.433-16D7556.65
liver, embryo E16.CNhs10523.462-17F5512.26
liver, embryo E17.CNhs10510.481-18A3458.07
liver, embryo E18.CNhs10579.499-43G4512.96
liver, neonate N00.CNhs11117.641-24F4364.16
liver, neonate N03.CNhs11123.1345-25G2198.51
liver, neonate N06.CNhs11101.684-20A8142.33
liver, neonate N07.CNhs11103.716-20H2152.58
liver, neonate N10.CNhs11115.751-24B9122.63
liver, neonate N20.CNhs11220.823-25A3114.17
liver, neonate N25.CNhs11198.1368-26H1172.04
liver, neonate N30.CNhs11106.1382-42D1254.73
lung, adult.CNhs10474.28-22B1169.42
lung, embryo E12.CNhs10522.354-16G236.19
lung, embryo E14.CNhs10604.404-26F822.16
lung, embryo E15.CNhs11020.432-17C521.90
lung, embryo E16.CNhs10998.458-17B624.64
lung, embryo E17.CNhs10605.480-44A642.55
lung, embryo E18.CNhs10583.1287-20I666.41
lung, neonate N00.CNhs11224.640-42C6104.59
lung, neonate N06.CNhs11212.683-20E580.71
lung, neonate N07.CNhs11111.715-19A383.27
lung, neonate N10.CNhs11219.750-23E682.92
lung, neonate N20.CNhs11109.822-18A4130.11
lung, neonate N25.CNhs11119.1359-25C7110.00
lung, neonate N30.CNhs11133.1394-42H2139.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1521.74
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1467.76
mammary gland, adult lactating day02.CNhs10480.595-22B6130.81
mammary gland, adult pregnant day19.CNhs10476.588-5H2165.01
medulla oblongata, adult.CNhs10477.17-12C2618.76
medulla oblongata, neonate N30.CNhs11200.1396-42A3536.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C797.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2202.99
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1211.39
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2203.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3229.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7232.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8252.43
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9245.43
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4251.79
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5256.02
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6278.68
olfactory brain, adult.CNhs10489.18-22I9384.62
ovary, adult.CNhs10507.91-2I7142.79
ovary, embryo E18.CNhs11040.505-44H7103.46
ovary, neonate N00.CNhs11217.1299-22I498.38
oviduct, adult pregnant day01.CNhs10500.988-6G6140.72
pancreas, adult.CNhs10486.34-16E4134.07
pancreas, embryo E14.CNhs11012.405-44F445.64
pancreas, embryo E15.CNhs11042.1556-45F240.51
pancreas, embryo E16.CNhs11003.460-26E549.79
pancreas, embryo E17.CNhs10599.1558-45G391.25
pancreas, embryo E18.CNhs10580.1535-43I797.76
pancreas, neonate N00.CNhs11105.645-26G9118.62
pancreas, neonate N01.CNhs11138.1531-43D774.52
pancreas, neonate N02.CNhs11139.1539-43D872.37
pancreas, neonate N16.CNhs11136.787-43B694.49
pancreas, neonate N25.CNhs11094.1555-45E294.88
pancreas, neonate N30.CNhs11182.1548-44H5147.48
pituitary gland, adult.CNhs10493.21-1G8123.92
pituitary gland, embryo E12.CNhs11018.346-16E658.16
pituitary gland, embryo E13.CNhs11009.370-44C782.01
pituitary gland, embryo E14.CNhs11037.398-44A569.02
pituitary gland, embryo E15.CNhs10592.427-16B969.16
pituitary gland, embryo E16.CNhs11036.449-43F692.04
pituitary gland, embryo E17.CNhs11039.1265-44F588.69
pituitary gland, neonate N00.CNhs11190.1308-22E9175.37
placenta, adult pregnant day10.CNhs10472.539-13I7167.56
placenta, adult pregnant day17.CNhs10464.577-18G3188.74
prostate, adult.CNhs10470.859-1F8125.70
skin, adult.CNhs10492.30-1C3210.39
skin, neonate N00.CNhs11124.650-25G4162.11
skin, neonate N03.CNhs11215.662-22H394.33
skin, neonate N06.CNhs11097.693-20I5105.53
skin, neonate N10.CNhs11108.762-6C4103.08
small intestine, neonate N16.CNhs11114.790-21I1165.85
spinal cord, adult.CNhs10505.24-13C9659.19
spleen, adult.CNhs10465.25-2G2492.79
spleen, embryo E16.CNhs11035.461-43C1124.24
spleen, embryo E18.CNhs11011.1271-21F2270.01
spleen, neonate N10.CNhs11116.752-24D1571.32
spleen, neonate N20.CNhs11112.824-19H1467.08
spleen, neonate N25.CNhs11099.1354-25G3469.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C649.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C953.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D359.84
stomach, adult.CNhs10503.33-1H6111.70
stomach, embryo E12.CNhs10588.356-43E339.38
stomach, embryo E15.CNhs10603.1252-16G847.78
stomach, embryo E16.CNhs11022.459-17D442.23
stomach, embryo E17.CNhs11006.1035-18D546.21
stomach, embryo E18.CNhs10999.1286-20C657.21
stomach, neonate N03.CNhs11193.1340-24B873.37
stomach, neonate N07.CNhs11210.718-18A992.16
stomach, neonate N25.CNhs11104.1355-25E468.84
stomach, neonate N30.CNhs11134.1386-42I1139.85
submandibular gland, adult.CNhs10469.59-29C1271.53
testis, adult.CNhs10504.57-7G5572.71
testis, embryo E13.CNhs11031.389-23F543.81
testis, embryo E15.CNhs11034.443-27C546.00
testis, embryo E16.CNhs11033.470-26G568.64
testis, embryo E17.CNhs11029.486-18I567.03
testis, embryo E18.CNhs11027.503-18G569.78
testis, neonate N00.CNhs11189.1300-22B794.94
testis, neonate N07.CNhs11222.726-26I463.80
testis, neonate N10.CNhs11204.763-44D965.33
testis, neonate N20.CNhs11110.839-18H3152.20
testis, neonate N30.CNhs11130.1391-42E2294.94
thymus, adult.CNhs10471.38-12B586.90
thymus, embryo E14.CNhs11041.402-44I447.23
thymus, embryo E15.CNhs11005.430-45I246.01
thymus, embryo E16.CNhs11002.456-26C547.16
thymus, embryo E17.CNhs10581.478-18C150.49
thymus, embryo E18.CNhs10595.1273-19G450.47
thymus, neonate N02.CNhs11181.1541-43F855.77
thymus, neonate N03.CNhs11137.2104-43C751.69
thymus, neonate N06.CNhs11197.681-26C458.46
thymus, neonate N07.CNhs11211.713-19D361.65
thymus, neonate N10.CNhs11194.748-24E461.40
thymus, neonate N20.CNhs11186.820-7A277.09
thymus, neonate N25.CNhs11125.1362-25G755.32
thymus, neonate N30.CNhs11132.1393-42G282.16
tongue, adult.CNhs10499.32-1B4148.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H376.36
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F726.47
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G560.27
urinary bladder, adult.CNhs10481.879-12E4169.23
uterus, adult pregnant day19.CNhs10497.590-15F5227.28
uterus, adult.CNhs10509.92-27E5101.83
vagina, adult.CNhs10502.89-27D5134.84
vesicular gland, adult.CNhs10491.51-27F8160.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1431.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2435.01
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3414.78
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7468.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4399.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5420.75
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6397.59
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7422.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8420.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9452.52
whole body, embryo E11.CNhs11014.324-5I824.08
whole body, embryo E12.CNhs10587.857-27C9119.71
whole body, embryo E13.CNhs10512.372-23H2104.32
whole body, embryo E14.5.CNhs10578.420-27D2163.85
whole body, embryo E14.CNhs10519.395-14B186.99
whole body, embryo E16.CNhs10514.453-14F281.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5135.57
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5143.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5138.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5134.69
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5135.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5134.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5134.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5132.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5138.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5132.41
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5136.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5135.81
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5106.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5127.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5137.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5124.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5118.74
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5126.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5120.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5117.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5120.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5127.06
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5128.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5164.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5138.21
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5134.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5127.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5124.41
whole body, embryo E17.5.CNhs10513.490-9F9154.71
whole body, embryo E17.CNhs10517.475-3I5155.88
whole body, embryo E18.CNhs10516.493-3B3148.08
whole body, neonate N00.CNhs10525.657-19C2185.65
whole body, neonate N01.CNhs10576.659-23C6196.84
whole body, neonate N06.CNhs10515.692-21D1196.11
whole body, neonate N10.CNhs10518.761-6B4151.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.44e-0843
ectodermal cell4.51e-0844
neurectodermal cell4.51e-0844
embryonic cell1.62e-0770
electrically responsive cell6.91e-0739
electrically active cell6.91e-0739

Uber anatomy
Ontology termp-valuen
nervous system1.47e-1475
central nervous system3.12e-1473
ectoderm-derived structure5.84e-1295
ectoderm5.84e-1295
presumptive ectoderm5.84e-1295
regional part of nervous system3.45e-1054
neural tube1.95e-0952
neural rod1.95e-0952
future spinal cord1.95e-0952
neural keel1.95e-0952
gray matter1.21e-0834
brain2.36e-0847
future brain2.36e-0847
neurectoderm2.41e-0864
neural plate2.41e-0864
presumptive neural plate2.41e-0864
regional part of brain4.77e-0846
brain grey matter8.16e-0829
regional part of telencephalon8.16e-0829
telencephalon8.16e-0829
ecto-epithelium7.96e-0773
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