FFCP PHASE1:Mm9::chr11:3166380..3166426,-: Difference between revisions
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{{FFCP|EntrezGene=13494|HGNC=|UniProt=P32233,D6RHA5,Q5NBZ3|association_with_transcript=0bp_to_ENSMUST00000020741,ENSMUST00000125424,ENSMUST00000132159,ENSMUST00000166162,NM_007879,uc007hsh.1,uc007hsi.1_5end|description=CAGE_peak_1_at_Drg1_5end|id=chr11:3166380..3166426,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!6.82e-18!200;UBERON:0000062!1.02e-11!269;UBERON:0000477!3.42e-11!154;UBERON:0000119!1.94e-10!183;UBERON:0000483!2.61e-10!181;UBERON:0000949!5.24e-10!72;UBERON:0007811!9.81e-10!86;UBERON:0003080!1.65e-09!40;UBERON:0002780!2.59e-09!39;UBERON:0001890!2.59e-09!39;UBERON:0006240!2.59e-09!39;UBERON:0002616!2.80e-09!49;UBERON:0000955!3.72e-09!50;UBERON:0006238!3.72e-09!50;UBERON:0004111!4.25e-09!122;UBERON:0000025!6.77e-09!114;UBERON:0002050!2.30e-08!317;UBERON:0005423!2.30e-08!317;UBERON:0000480!3.29e-08!308;UBERON:0000467!3.29e-08!308;UBERON:0000153!3.61e-08!94;UBERON:0003056!3.96e-08!49;UBERON:0002791!7.94e-08!29;UBERON:0003528!7.94e-08!29;UBERON:0001893!7.94e-08!29;UBERON:0001049!1.13e-07!52;UBERON:0005068!1.13e-07!52;UBERON:0006241!1.13e-07!52;UBERON:0007135!1.13e-07!52;UBERON:0000033!2.04e-07!63;UBERON:0003104!2.12e-07!131;UBERON:0009142!2.12e-07!131;UBERON:0002530!2.16e-07!65;UBERON:0000466!3.28e-07!79;UBERON:0002346!3.68e-07!71;UBERON:0003075!3.68e-07!71;UBERON:0007284!3.68e-07!71;UBERON:0002368!4.15e-07!60;UBERON:0000923!4.80e-07!314;UBERON:0005291!4.80e-07!314;UBERON:0006598!4.80e-07!314;UBERON:0002532!4.80e-07!314;UBERON:0001048!8.61e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0000949,5.24e-10,72;UBERON:0003080,1.65e-09,40;UBERON:0002780,2.59e-09,39;UBERON:0001890,2.59e-09,39;UBERON:0006240,2.59e-09,39;UBERON:0000119,3.38e-09,176;UBERON:0004111,4.25e-09,122;UBERON:0000483,4.41e-09,174;UBERON:0002616,6.30e-09,46;UBERON:0000025,6.77e-09,114;UBERON:0000955,8.43e-09,47;UBERON:0006238,8.43e-09,47;UBERON:0003056,3.96e-08,49;UBERON:0003528,7.94e-08,29;UBERON:0002791,7.94e-08,29;UBERON:0001893,7.94e-08,29;UBERON:0000073,9.40e-08,54;UBERON:0001049,1.13e-07,52;UBERON:0005068,1.13e-07,52;UBERON:0006241,1.13e-07,52;UBERON:0007135,1.13e-07,52;UBERON:0002530,2.16e-07,65;UBERON:0002368,4.15e-07,60;UBERON:0002100,8.12e-07,90|phase1_expression=33.1508113506924,24.0793031271159,22.2949627300873,15.4256747766483,13.023288978605,27.364321321638,25.2301651843168,26.21203465864,21.540674489205,20.3636137900134,37.8391709778366,39.0085857487195,28.5905218985114,29.2858348103641,33.6440859433819,27.3341610976265,39.1754651751762,23.0287380711514,26.4630856859076,28.00971701867,38.94982688919,38.0284343099391,30.5603753292554,20.7990149631429,26.8408858848589,28.137366241636,24.5534337810673,30.8123862740821,21.4726463985703,28.7314347926321,31.264002002398,43.1820857952549,37.5189520426588,15.8481681015439,38.9949686664221,36.7378566242268,31.8504195769296,37.2493151355848,40.6294379152376,37.1701858221397,27.6468799374577,30.7370468231301,35.4422557712742,36.3841803949418,40.5507724878058,49.3740763314923,17.2126095756569,19.1862137614793,35.36947542025,23.9148775861369,21.1379496654297,27.3129872293446,24.6640430904872,25.3876749703971,20.8378155468328,36.5308399171045,32.3782787130795,40.7380952899179,34.7984312678508,25.3915670050576,28.5224131577781,43.710944636918,26.6788438833342,24.7472422252385,14.8329954385046,29.1296847127901,13.7816050838466,15.7529505181837,40.9573968618487,36.8566211645515,39.5410927340598,30.564655331207,27.3876990780001,42.5043073275891,34.1209876824921,37.6879702510109,28.6301290598411,40.9876355253453,39.1696659803421,31.1251639043257,29.3675335963735,39.5894161623138,46.0651948352279,46.7092966326294,43.7002988641677,23.5702868378934,28.1895927982224,35.4158947068071,39.6047991132553,32.9492002065585,24.3486170509409,25.8127163094416,39.4383373550495,32.382191498269,49.3830077260229,45.2507155968309,25.8417733042423,33.2339129027213,31.4341065569471,27.2071472372962,27.1827800168993,29.5150898052931,38.2207859559969,63.9960032837998,25.5459428393233,31.6699831843873,33.8701378159905,31.0580152835843,31.3314839213078,38.2980718787248,39.0341985223806,23.1393763517227,36.2066330692012,38.2835507003661,34.1007250693544,46.6223053833096,26.6970565153124,23.8588938917854,34.4998115260451,30.5739346400603,29.3719219552323,28.6076399349781,22.3670113461747,33.0842300623048,45.8688287921467,18.6483650302272,30.3132264999978,34.1944556666242,33.9277506285083,36.6987066541816,37.972550033946,48.6282342676785,41.1963638855695,45.0059204901382,36.9862719316017,44.2918648174978,33.3014719790534,28.115975357881,29.0631172198726,34.5124643653817,32.6602311836386,37.7039451270896,29.5301892880773,32.7029454703502,28.7114026418604,29.85049682637,34.5759363625399,25.3529303324235,39.0178067208444,28.7441241855085,29.7357399837074,29.8106196101502,28.6388666702366,25.074155989596,22.2244707320579,37.8165106955137,32.3018066164088,24.4480511758979,35.2362739250535,31.6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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13494 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P32233,uniprot:D6RHA5,uniprot:Q5NBZ3 | |||
|association_with_transcript=0bp_to_ENSMUST00000020741,ENSMUST00000125424,ENSMUST00000132159,ENSMUST00000166162,NM_007879,uc007hsh.1,uc007hsi.1_5end | |||
|cluster_id=chr11:3166380..3166426,- | |||
|description=CAGE_peak_1_at_Drg1_5end | |||
|id=chr11:3166380..3166426,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.82e-18!200;UBERON:0000062!1.02e-11!269;UBERON:0000477!3.42e-11!154;UBERON:0000119!1.94e-10!183;UBERON:0000483!2.61e-10!181;UBERON:0000949!5.24e-10!72;UBERON:0007811!9.81e-10!86;UBERON:0003080!1.65e-09!40;UBERON:0002780!2.59e-09!39;UBERON:0001890!2.59e-09!39;UBERON:0006240!2.59e-09!39;UBERON:0002616!2.80e-09!49;UBERON:0000955!3.72e-09!50;UBERON:0006238!3.72e-09!50;UBERON:0004111!4.25e-09!122;UBERON:0000025!6.77e-09!114;UBERON:0002050!2.30e-08!317;UBERON:0005423!2.30e-08!317;UBERON:0000480!3.29e-08!308;UBERON:0000467!3.29e-08!308;UBERON:0000153!3.61e-08!94;UBERON:0003056!3.96e-08!49;UBERON:0002791!7.94e-08!29;UBERON:0003528!7.94e-08!29;UBERON:0001893!7.94e-08!29;UBERON:0001049!1.13e-07!52;UBERON:0005068!1.13e-07!52;UBERON:0006241!1.13e-07!52;UBERON:0007135!1.13e-07!52;UBERON:0000033!2.04e-07!63;UBERON:0003104!2.12e-07!131;UBERON:0009142!2.12e-07!131;UBERON:0002530!2.16e-07!65;UBERON:0000466!3.28e-07!79;UBERON:0002346!3.68e-07!71;UBERON:0003075!3.68e-07!71;UBERON:0007284!3.68e-07!71;UBERON:0002368!4.15e-07!60;UBERON:0000923!4.80e-07!314;UBERON:0005291!4.80e-07!314;UBERON:0006598!4.80e-07!314;UBERON:0002532!4.80e-07!314;UBERON:0001048!8.61e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000949,5.24e-10,72;UBERON:0003080,1.65e-09,40;UBERON:0002780,2.59e-09,39;UBERON:0001890,2.59e-09,39;UBERON:0006240,2.59e-09,39;UBERON:0000119,3.38e-09,176;UBERON:0004111,4.25e-09,122;UBERON:0000483,4.41e-09,174;UBERON:0002616,6.30e-09,46;UBERON:0000025,6.77e-09,114;UBERON:0000955,8.43e-09,47;UBERON:0006238,8.43e-09,47;UBERON:0003056,3.96e-08,49;UBERON:0003528,7.94e-08,29;UBERON:0002791,7.94e-08,29;UBERON:0001893,7.94e-08,29;UBERON:0000073,9.40e-08,54;UBERON:0001049,1.13e-07,52;UBERON:0005068,1.13e-07,52;UBERON:0006241,1.13e-07,52;UBERON:0007135,1.13e-07,52;UBERON:0002530,2.16e-07,65;UBERON:0002368,4.15e-07,60;UBERON:0002100,8.12e-07,90 | |||
|phase1_expression=33.1508113506924,24.0793031271159,22.2949627300873,15.4256747766483,13.023288978605,27.364321321638,25.2301651843168,26.21203465864,21.540674489205,20.3636137900134,37.8391709778366,39.0085857487195,28.5905218985114,29.2858348103641,33.6440859433819,27.3341610976265,39.1754651751762,23.0287380711514,26.4630856859076,28.00971701867,38.94982688919,38.0284343099391,30.5603753292554,20.7990149631429,26.8408858848589,28.137366241636,24.5534337810673,30.8123862740821,21.4726463985703,28.7314347926321,31.264002002398,43.1820857952549,37.5189520426588,15.8481681015439,38.9949686664221,36.7378566242268,31.8504195769296,37.2493151355848,40.6294379152376,37.1701858221397,27.6468799374577,30.7370468231301,35.4422557712742,36.3841803949418,40.5507724878058,49.3740763314923,17.2126095756569,19.1862137614793,35.36947542025,23.9148775861369,21.1379496654297,27.3129872293446,24.6640430904872,25.3876749703971,20.8378155468328,36.5308399171045,32.3782787130795,40.7380952899179,34.7984312678508,25.3915670050576,28.5224131577781,43.710944636918,26.6788438833342,24.7472422252385,14.8329954385046,29.1296847127901,13.7816050838466,15.7529505181837,40.9573968618487,36.8566211645515,39.5410927340598,30.564655331207,27.3876990780001,42.5043073275891,34.1209876824921,37.6879702510109,28.6301290598411,40.9876355253453,39.1696659803421,31.1251639043257,29.3675335963735,39.5894161623138,46.0651948352279,46.7092966326294,43.7002988641677,23.5702868378934,28.1895927982224,35.4158947068071,39.6047991132553,32.9492002065585,24.3486170509409,25.8127163094416,39.4383373550495,32.382191498269,49.3830077260229,45.2507155968309,25.8417733042423,33.2339129027213,31.4341065569471,27.2071472372962,27.1827800168993,29.5150898052931,38.2207859559969,63.9960032837998,25.5459428393233,31.6699831843873,33.8701378159905,31.0580152835843,31.3314839213078,38.2980718787248,39.0341985223806,23.1393763517227,36.2066330692012,38.2835507003661,34.1007250693544,46.6223053833096,26.6970565153124,23.8588938917854,34.4998115260451,30.5739346400603,29.3719219552323,28.6076399349781,22.3670113461747,33.0842300623048,45.8688287921467,18.6483650302272,30.3132264999978,34.1944556666242,33.9277506285083,36.6987066541816,37.972550033946,48.6282342676785,41.1963638855695,45.0059204901382,36.9862719316017,44.2918648174978,33.3014719790534,28.115975357881,29.0631172198726,34.5124643653817,32.6602311836386,37.7039451270896,29.5301892880773,32.7029454703502,28.7114026418604,29.85049682637,34.5759363625399,25.3529303324235,39.0178067208444,28.7441241855085,29.7357399837074,29.8106196101502,28.6388666702366,25.074155989596,22.2244707320579,37.8165106955137,32.3018066164088,24.4480511758979,35.2362739250535,31.6902431979318,27.2050229578072,30.0703642639895,27.6991340634696,25.1858216636677,28.539415884165,28.6016752043002,32.4610815693539,34.6793066830493,34.0638889320905,39.564358843062,32.022179770613,34.7955970072291,28.9806152184187,35.027875296457,46.0534987355439,41.6763680136102,20.1555457620117,22.2138475997377,28.1540490706509,29.0295839825548,32.6034677144896,27.0255922995279,29.5762798313678,28.3436182907713,26.5736274464927,23.8813484349816,24.8821856712267,22.48208134065,27.1000081095577,21.5716658077013,30.0431889325825,25.2909417033046,36.6059048839448,29.7046132785295,31.5581659884625,28.1038832426534,27.3473006906352,29.8778592732757,29.4682262999039,30.7029107797573,32.8127341188473,30.7258938165283,39.1317467755037,33.8695564603671,36.1668551008294,32.6050062958038,36.9205420927075,30.6294992885569,32.0828573244589,26.1803485080238,34.8590737566326,40.9096505650241,35.9420516318386,36.8419538191818,41.5010105242366,39.4023049597494,39.2880335612988,42.9374734013397,31.4080423283228,41.3091277659657,31.289275476869,29.5356449248827,32.1525640155248,30.9886576267359,27.3750187018916,39.4169968672754,26.7979744980525,28.7904096543407,32.6882275747849,32.9365262578633,40.9263407022173,34.8604231181443,37.6978209848181,18.4927932498361,20.1623351937805,35.3199035270058,36.284433337241,42.7822656061542,35.0820783106085,30.5489821917291,31.2353137222094,27.7211508450613,29.2975820916607,25.8086301788756,29.6322236529584,29.1568826712497,27.5271277138928,25.7185154961954,26.4842811224171,31.8108103257589,31.0848786606108,34.7227927151148,33.2289397081295,29.3646818891113,35.84118735179,38.3593405124871,42.9299450889946,35.6463600738647,39.2751517531428,35.0476068656077,36.4383893367192,45.8052499141657,38.5017168655499,39.504594741977,40.0590712584995,30.9406629744561,38.1292358444243,33.1312413017611,35.7029967240402,35.7942848502759,32.2759225228938,33.8900753443934,34.3907453058433,40.1893732831271,32.1500240047283,32.8339709838921,37.9308844654535,33.8016818530034,29.7094545120466,32.8705440858449,36.8860542969692,33.6488844477376,28.5651219897254,38.568462818186,27.85195357005,36.1177018935639,29.6311243791539,33.3412168898303,28.1590109105312,43.2390747360328,33.8257075687772,29.6697078926155,23.7703954943609,15.2747298882418,34.3224553035532,2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| |||
|short_description=p1@Drg1 | |||
}} |
Revision as of 19:17, 5 August 2015
Short description: | p1@Drg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Drg1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000020741, ENSMUST00000125424, ENSMUST00000132159, ENSMUST00000166162, NM_007879, uc007hsh.1, uc007hsi.1_5end |
EntrezGene: | 13494 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endocrine system | 5.24e-10 | 72 |
anterior neural tube | 1.65e-09 | 40 |
regional part of forebrain | 2.59e-09 | 39 |
forebrain | 2.59e-09 | 39 |
future forebrain | 2.59e-09 | 39 |
cell layer | 3.38e-09 | 176 |
anatomical conduit | 4.25e-09 | 122 |
epithelium | 4.41e-09 | 174 |
regional part of brain | 6.30e-09 | 46 |
tube | 6.77e-09 | 114 |
brain | 8.43e-09 | 47 |
future brain | 8.43e-09 | 47 |
pre-chordal neural plate | 3.96e-08 | 49 |
brain grey matter | 7.94e-08 | 29 |
regional part of telencephalon | 7.94e-08 | 29 |
telencephalon | 7.94e-08 | 29 |
regional part of nervous system | 9.40e-08 | 54 |
neural tube | 1.13e-07 | 52 |
neural rod | 1.13e-07 | 52 |
future spinal cord | 1.13e-07 | 52 |
neural keel | 1.13e-07 | 52 |
gland | 2.16e-07 | 65 |
endocrine gland | 4.15e-07 | 60 |
trunk | 8.12e-07 | 90 |