FFCP PHASE1:Mm9::chr11:3230671..3230697,+: Difference between revisions
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{{FFCP|EntrezGene=216505|HGNC=|MCL_coexpression_id=1562|UniProt=|association_with_transcript=-33bp_to_ENSMUST00000149253_5end|description=CAGE_peak_12_at_Pik3ip1_5end|id=chr11:3230671..3230697,+|ontology_enrichment_celltype=CL:0000988!4.28e-11!32;CL:0002032!4.28e-11!32;CL:0000037!4.28e-11!32;CL:0000566!4.28e-11!32;CL:0000837!4.28e-11!32;CL:0000219!3.69e-08!54;CL:0000542!1.38e-07!13;CL:0000051!1.38e-07!13;CL:0002031!1.88e-07!25;CL:0002320!3.30e-07!46;CL:0000134!3.30e-07!46;CL:0000838!4.01e-07!12;CL:0000553!4.69e-07!6;CL:0000556!4.69e-07!6|ontology_enrichment_celltype_v019_2=CL:0000084,2.55e-24,11;CL:0000827,2.55e-24,11;CL:0000838,2.99e-22,12;CL:0000542,1.69e-20,13;CL:0000051,1.69e-20,13;CL:0000988,2.51e-16,32;CL:0002032,2.51e-16,32;CL:0000037,2.51e-16,32;CL:0000837,2.51e-16,32;CL:0000791,1.37e-15,9;CL:0000789,1.37e-15,9;CL:0002420,1.37e-15,9;CL:0002419,1.37e-15,9;CL:0000790,1.37e-15,9;CL:0000738,1.53e-15,17;CL:0002087,1.53e-15,17;CL:0002031,1.47e-13,25;CL:0000624,1.05e-11,8;CL:0002320,5.70e-11,46;CL:0000134,5.70e-11,46;CL:0000219,3.77e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.48e-10!45;UBERON:0003061!7.48e-10!45;UBERON:0002193!1.96e-09!48;UBERON:0002370!2.38e-07!23;UBERON:0000974!2.38e-07!23;UBERON:0004807!2.38e-07!23;UBERON:0005058!2.38e-07!23;UBERON:0003351!2.38e-07!23;UBERON:0009113!2.38e-07!23;UBERON:0003295!2.38e-07!23;UBERON:0009722!2.38e-07!23;UBERON:0005562!2.38e-07!23;UBERON:0007690!2.38e-07!23;UBERON:0002384!3.30e-07!46;UBERON:0006562!7.54e-07!24;UBERON:0003408!7.54e-07!24;UBERON:0001557!7.54e-07!24;UBERON:0001042!7.54e-07!24;UBERON:0008814!7.54e-07!24;UBERON:0009145!7.54e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.70e-11,46;UBERON:0002390,4.66e-09,45;UBERON:0003061,4.66e-09,45;UBERON:0002193,2.02e-08,48;UBERON:0002405,2.02e-08,48;UBERON:0002370,2.04e-08,23;UBERON:0000974,2.04e-08,23;UBERON:0004807,2.04e-08,23;UBERON:0005058,2.04e-08,23;UBERON:0003351,2.04e-08,23;UBERON:0009113,2.04e-08,23;UBERON:0003295,2.04e-08,23;UBERON:0009722,2.04e-08,23;UBERON:0005562,2.04e-08,23;UBERON:0007690,2.04e-08,23;UBERON:0006562,4.77e-08,24;UBERON:0003408,4.77e-08,24;UBERON:0001557,4.77e-08,24;UBERON:0001042,4.77e-08,24;UBERON:0008814,4.77e-08,24;UBERON:0009145,4.77e-08,24;UBERON:0000072,4.17e-07,27|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0,0.468129052643987,0,0,8.21763503669787,5.85716696207283,0.666219523631325,0.607425802169478,0.699561878128147,0.946386496074713,0.959801035240171,2.12194825899015,0.17008658030214,1.68794617041505,1.82839852397255,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.436050312760893,0.659058548203415,0.58328969722285,0.699932108126813,0,0.671130424230945,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0,0,0.599075622529601,0,0.381210681219194,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.583826711835847,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0.170870880797853,0,0.555583582109135,0,0,0,1.35982743995084,1.95932033253121,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0,0.632022241256357,0,0,0.129920822977795,0.358053391334963,1.19208812868759,0.240390899039938,0.590758108698309,0.807731599585181,0.304827226619999,0.907435666231565,1.55932609183604,1.44317762460494,2.10378423926824,0,0,0,0,0.386379188064381,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p12@Pik3ip1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216505 | |||
|HGNC= | |||
|MCL_coexpression_id=1562 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-33bp_to_ENSMUST00000149253_5end | |||
|cluster_id=chr11:3230671..3230697,+ | |||
|description=CAGE_peak_12_at_Pik3ip1_5end | |||
|id=chr11:3230671..3230697,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.28e-11!32;CL:0002032!4.28e-11!32;CL:0000037!4.28e-11!32;CL:0000566!4.28e-11!32;CL:0000837!4.28e-11!32;CL:0000219!3.69e-08!54;CL:0000542!1.38e-07!13;CL:0000051!1.38e-07!13;CL:0002031!1.88e-07!25;CL:0002320!3.30e-07!46;CL:0000134!3.30e-07!46;CL:0000838!4.01e-07!12;CL:0000553!4.69e-07!6;CL:0000556!4.69e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.55e-24,11;CL:0000827,2.55e-24,11;CL:0000838,2.99e-22,12;CL:0000542,1.69e-20,13;CL:0000051,1.69e-20,13;CL:0000988,2.51e-16,32;CL:0002032,2.51e-16,32;CL:0000037,2.51e-16,32;CL:0000837,2.51e-16,32;CL:0000791,1.37e-15,9;CL:0000789,1.37e-15,9;CL:0002420,1.37e-15,9;CL:0002419,1.37e-15,9;CL:0000790,1.37e-15,9;CL:0000738,1.53e-15,17;CL:0002087,1.53e-15,17;CL:0002031,1.47e-13,25;CL:0000624,1.05e-11,8;CL:0002320,5.70e-11,46;CL:0000134,5.70e-11,46;CL:0000219,3.77e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.48e-10!45;UBERON:0003061!7.48e-10!45;UBERON:0002193!1.96e-09!48;UBERON:0002370!2.38e-07!23;UBERON:0000974!2.38e-07!23;UBERON:0004807!2.38e-07!23;UBERON:0005058!2.38e-07!23;UBERON:0003351!2.38e-07!23;UBERON:0009113!2.38e-07!23;UBERON:0003295!2.38e-07!23;UBERON:0009722!2.38e-07!23;UBERON:0005562!2.38e-07!23;UBERON:0007690!2.38e-07!23;UBERON:0002384!3.30e-07!46;UBERON:0006562!7.54e-07!24;UBERON:0003408!7.54e-07!24;UBERON:0001557!7.54e-07!24;UBERON:0001042!7.54e-07!24;UBERON:0008814!7.54e-07!24;UBERON:0009145!7.54e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.70e-11,46;UBERON:0002390,4.66e-09,45;UBERON:0003061,4.66e-09,45;UBERON:0002193,2.02e-08,48;UBERON:0002405,2.02e-08,48;UBERON:0002370,2.04e-08,23;UBERON:0000974,2.04e-08,23;UBERON:0004807,2.04e-08,23;UBERON:0005058,2.04e-08,23;UBERON:0003351,2.04e-08,23;UBERON:0009113,2.04e-08,23;UBERON:0003295,2.04e-08,23;UBERON:0009722,2.04e-08,23;UBERON:0005562,2.04e-08,23;UBERON:0007690,2.04e-08,23;UBERON:0006562,4.77e-08,24;UBERON:0003408,4.77e-08,24;UBERON:0001557,4.77e-08,24;UBERON:0001042,4.77e-08,24;UBERON:0008814,4.77e-08,24;UBERON:0009145,4.77e-08,24;UBERON:0000072,4.17e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0,0.468129052643987,0,0,8.21763503669787,5.85716696207283,0.666219523631325,0.607425802169478,0.699561878128147,0.946386496074713,0.959801035240171,2.12194825899015,0.17008658030214,1.68794617041505,1.82839852397255,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.436050312760893,0.659058548203415,0.58328969722285,0.699932108126813,0,0.671130424230945,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0,0,0.599075622529601,0,0.381210681219194,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.583826711835847,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0.170870880797853,0,0.555583582109135,0,0,0,1.35982743995084,1.95932033253121,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0,0.632022241256357,0,0,0.129920822977795,0.358053391334963,1.19208812868759,0.240390899039938,0.590758108698309,0.807731599585181,0.304827226619999,0.907435666231565,1.55932609183604,1.44317762460494,2.10378423926824,0,0,0,0,0.386379188064381,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p12@Pik3ip1 | |||
}} |
Revision as of 19:47, 5 August 2015
Short description: | p12@Pik3ip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Pik3ip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1562 |
Association with transcript: | -33bp_to_ENSMUST00000149253_5end |
EntrezGene: | 216505 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.55e-24 | 11 |
pro-T cell | 2.55e-24 | 11 |
lymphoid lineage restricted progenitor cell | 2.99e-22 | 12 |
lymphocyte | 1.69e-20 | 13 |
common lymphoid progenitor | 1.69e-20 | 13 |
hematopoietic cell | 2.51e-16 | 32 |
hematopoietic oligopotent progenitor cell | 2.51e-16 | 32 |
hematopoietic stem cell | 2.51e-16 | 32 |
hematopoietic multipotent progenitor cell | 2.51e-16 | 32 |
mature alpha-beta T cell | 1.37e-15 | 9 |
alpha-beta T cell | 1.37e-15 | 9 |
immature T cell | 1.37e-15 | 9 |
mature T cell | 1.37e-15 | 9 |
immature alpha-beta T cell | 1.37e-15 | 9 |
leukocyte | 1.53e-15 | 17 |
nongranular leukocyte | 1.53e-15 | 17 |
hematopoietic lineage restricted progenitor cell | 1.47e-13 | 25 |
CD4-positive, alpha-beta T cell | 1.05e-11 | 8 |
connective tissue cell | 5.70e-11 | 46 |
mesenchymal cell | 5.70e-11 | 46 |
motile cell | 3.77e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.70e-11 | 46 |
hematopoietic system | 4.66e-09 | 45 |
blood island | 4.66e-09 | 45 |
hemolymphoid system | 2.02e-08 | 48 |
immune system | 2.02e-08 | 48 |
thymus | 2.04e-08 | 23 |
neck | 2.04e-08 | 23 |
respiratory system epithelium | 2.04e-08 | 23 |
hemolymphoid system gland | 2.04e-08 | 23 |
pharyngeal epithelium | 2.04e-08 | 23 |
thymic region | 2.04e-08 | 23 |
pharyngeal gland | 2.04e-08 | 23 |
entire pharyngeal arch endoderm | 2.04e-08 | 23 |
thymus primordium | 2.04e-08 | 23 |
early pharyngeal endoderm | 2.04e-08 | 23 |
pharynx | 4.77e-08 | 24 |
gland of gut | 4.77e-08 | 24 |
upper respiratory tract | 4.77e-08 | 24 |
chordate pharynx | 4.77e-08 | 24 |
pharyngeal arch system | 4.77e-08 | 24 |
pharyngeal region of foregut | 4.77e-08 | 24 |
segment of respiratory tract | 4.17e-07 | 27 |