FFCP PHASE1:Mm9::chr18:52688002..52688039,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1719|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:52688002..52688039,-|id=chr18:52688002..52688039,-|ontology_enrichment_celltype=CL:0000680!6.95e-07!6;CL:0000183!6.95e-07!6;CL:0000187!6.95e-07!6;CL:0000056!6.95e-07!6|ontology_enrichment_celltype_v019_2=CL:0000680,3.99e-25,6;CL:0000187,3.99e-25,6;CL:0000056,3.99e-25,6;CL:0000222,1.79e-21,7;CL:0000355,1.35e-16,9;CL:0000192,1.24e-13,3;CL:0000359,1.24e-13,3;CL:0002539,1.24e-13,3;CL:0000514,1.24e-13,3;CL:0002494,3.87e-13,3;CL:0000737,3.87e-13,3;CL:0000746,3.87e-13,3;CL:0000513,3.87e-13,3;CL:0000128,5.64e-11,6;CL:0000126,5.64e-11,6;CL:0000127,5.64e-11,6;CL:0002605,6.82e-09,2;CL:0002604,6.82e-09,2;CL:0002453,2.90e-08,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.35e-16,9;UBERON:0002036,1.35e-16,9;UBERON:0002385,1.35e-16,9;UBERON:0000486,1.35e-16,9;UBERON:0007503,1.35e-16,9;UBERON:0001015,1.35e-16,9;UBERON:0002329,1.35e-16,9;UBERON:0003082,1.35e-16,9;UBERON:0003059,1.35e-16,9;UBERON:0007282,1.35e-16,9;UBERON:0004290,1.35e-16,9;UBERON:0009618,1.35e-16,9;UBERON:0000383,6.92e-15,10;UBERON:0001135,1.24e-13,3;UBERON:0004237,1.24e-13,3;UBERON:0004695,1.24e-13,3;UBERON:0002111,1.24e-13,3;UBERON:0004178,1.24e-13,3;UBERON:0007524,1.74e-13,11;UBERON:0003077,1.74e-13,11;UBERON:0007285,1.74e-13,11;UBERON:0000947,2.41e-10,4;UBERON:0001637,2.41e-10,4;UBERON:0004573,2.41e-10,4;UBERON:0003509,2.41e-10,4;UBERON:0004571,2.41e-10,4;UBERON:0010191,2.41e-10,4;UBERON:0004572,2.41e-10,4;UBERON:0000055,2.31e-08,5;UBERON:0007500,2.31e-08,5;UBERON:0001981,2.31e-08,5;UBERON:0002049,2.31e-08,5;UBERON:0007798,2.31e-08,5;UBERON:0004537,2.31e-08,5;UBERON:0006965,2.31e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5394599909254,6.69087746048796,3.85448179539531,3.9119567217402,0,1.09843091367236,3.69416808241138,1.53985063787899,0,0,0,0,3.60163210450326,3.15186783932632,5.67239301505187,0,0,0,0.338844532069132,4.4464739805557,0.449949858640699,0,2.1314403448383,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,5.96506129023202,5.45550609666024,3.5333957451034,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.622034853050465,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,1.53437012699302,0.556094498451196,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.456994050438915,0,0,0,0.561086559122548,0.316182685621286,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0.488894929326078,0.678980343100753,0.704070744865506,0.502518772325447,0.476087281772027,1.17080188714679,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0.723245292907558,0,0,0,0,0,0,10.4918365041072,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0.395287777946524,0,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0,0.177340233642274,0.356737635204141,0.822745103010605,0.913394847343798,0,0.21183207086382,0,0,0.645857706783622,0.241251699712623,0.358117032009409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0.209088296014469,0.87345025498471,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0,1.12609485270709,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0,0.50695859978048,0,0.0936415074698824,0.448176066834085,0.229741875822453,0,0.463537303779422,0.192909220463705,0.412085900803307,0,1.02860775715625,0.177475806159338,0.238436189947321,0,0.282328141245992,0.0846146078916765,0.365855945745545,1.05227884575137,0.135804113845862,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0.956441660344217,0.441182838239031,0.231867835620421|short_description=p@chr18:52688002..52688039,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1719 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:52688002..52688039,- | |||
|description=CAGE_peak_at_chr18:52688002..52688039,- | |||
|id=chr18:52688002..52688039,- | |||
|ontology_enrichment_celltype=CL:0000680!6.95e-07!6;CL:0000183!6.95e-07!6;CL:0000187!6.95e-07!6;CL:0000056!6.95e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.99e-25,6;CL:0000187,3.99e-25,6;CL:0000056,3.99e-25,6;CL:0000222,1.79e-21,7;CL:0000355,1.35e-16,9;CL:0000192,1.24e-13,3;CL:0000359,1.24e-13,3;CL:0002539,1.24e-13,3;CL:0000514,1.24e-13,3;CL:0002494,3.87e-13,3;CL:0000737,3.87e-13,3;CL:0000746,3.87e-13,3;CL:0000513,3.87e-13,3;CL:0000128,5.64e-11,6;CL:0000126,5.64e-11,6;CL:0000127,5.64e-11,6;CL:0002605,6.82e-09,2;CL:0002604,6.82e-09,2;CL:0002453,2.90e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.35e-16,9;UBERON:0002036,1.35e-16,9;UBERON:0002385,1.35e-16,9;UBERON:0000486,1.35e-16,9;UBERON:0007503,1.35e-16,9;UBERON:0001015,1.35e-16,9;UBERON:0002329,1.35e-16,9;UBERON:0003082,1.35e-16,9;UBERON:0003059,1.35e-16,9;UBERON:0007282,1.35e-16,9;UBERON:0004290,1.35e-16,9;UBERON:0009618,1.35e-16,9;UBERON:0000383,6.92e-15,10;UBERON:0001135,1.24e-13,3;UBERON:0004237,1.24e-13,3;UBERON:0004695,1.24e-13,3;UBERON:0002111,1.24e-13,3;UBERON:0004178,1.24e-13,3;UBERON:0007524,1.74e-13,11;UBERON:0003077,1.74e-13,11;UBERON:0007285,1.74e-13,11;UBERON:0000947,2.41e-10,4;UBERON:0001637,2.41e-10,4;UBERON:0004573,2.41e-10,4;UBERON:0003509,2.41e-10,4;UBERON:0004571,2.41e-10,4;UBERON:0010191,2.41e-10,4;UBERON:0004572,2.41e-10,4;UBERON:0000055,2.31e-08,5;UBERON:0007500,2.31e-08,5;UBERON:0001981,2.31e-08,5;UBERON:0002049,2.31e-08,5;UBERON:0007798,2.31e-08,5;UBERON:0004537,2.31e-08,5;UBERON:0006965,2.31e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5394599909254,6.69087746048796,3.85448179539531,3.9119567217402,0,1.09843091367236,3.69416808241138,1.53985063787899,0,0,0,0,3.60163210450326,3.15186783932632,5.67239301505187,0,0,0,0.338844532069132,4.4464739805557,0.449949858640699,0,2.1314403448383,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,5.96506129023202,5.45550609666024,3.5333957451034,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.622034853050465,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,1.53437012699302,0.556094498451196,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.456994050438915,0,0,0,0.561086559122548,0.316182685621286,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0.488894929326078,0.678980343100753,0.704070744865506,0.502518772325447,0.476087281772027,1.17080188714679,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0.723245292907558,0,0,0,0,0,0,10.4918365041072,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0.395287777946524,0,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0,0.177340233642274,0.356737635204141,0.822745103010605,0.913394847343798,0,0.21183207086382,0,0,0.645857706783622,0.241251699712623,0.358117032009409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0.209088296014469,0.87345025498471,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0,1.12609485270709,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0,0.50695859978048,0,0.0936415074698824,0.448176066834085,0.229741875822453,0,0.463537303779422,0.192909220463705,0.412085900803307,0,1.02860775715625,0.177475806159338,0.238436189947321,0,0.282328141245992,0.0846146078916765,0.365855945745545,1.05227884575137,0.135804113845862,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0.956441660344217,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr18:52688002..52688039,- | |||
}} |
Latest revision as of 20:59, 5 August 2015
Short description: | p@chr18:52688002..52688039, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:52688002..52688039, - |
Coexpression cluster: | MCL_coexpression_mm9:1719 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.99e-25 | 6 |
muscle cell | 3.99e-25 | 6 |
myoblast | 3.99e-25 | 6 |
mesodermal cell | 1.79e-21 | 7 |
multi-potent skeletal muscle stem cell | 1.35e-16 | 9 |
smooth muscle cell | 1.24e-13 | 3 |
vascular associated smooth muscle cell | 1.24e-13 | 3 |
aortic smooth muscle cell | 1.24e-13 | 3 |
smooth muscle myoblast | 1.24e-13 | 3 |
cardiocyte | 3.87e-13 | 3 |
striated muscle cell | 3.87e-13 | 3 |
cardiac muscle cell | 3.87e-13 | 3 |
cardiac muscle myoblast | 3.87e-13 | 3 |
oligodendrocyte | 5.64e-11 | 6 |
macroglial cell | 5.64e-11 | 6 |
astrocyte | 5.64e-11 | 6 |
astrocyte of the cerebral cortex | 6.82e-09 | 2 |
astrocyte of the hippocampus | 6.82e-09 | 2 |
oligodendrocyte precursor cell | 2.90e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.35e-16 | 9 |
striated muscle tissue | 1.35e-16 | 9 |
muscle tissue | 1.35e-16 | 9 |
multilaminar epithelium | 1.35e-16 | 9 |
epithelial vesicle | 1.35e-16 | 9 |
musculature | 1.35e-16 | 9 |
somite | 1.35e-16 | 9 |
myotome | 1.35e-16 | 9 |
presomitic mesoderm | 1.35e-16 | 9 |
presumptive segmental plate | 1.35e-16 | 9 |
dermomyotome | 1.35e-16 | 9 |
trunk paraxial mesoderm | 1.35e-16 | 9 |
musculature of body | 6.92e-15 | 10 |
smooth muscle tissue | 1.24e-13 | 3 |
blood vessel smooth muscle | 1.24e-13 | 3 |
arterial system smooth muscle | 1.24e-13 | 3 |
artery smooth muscle tissue | 1.24e-13 | 3 |
aorta smooth muscle tissue | 1.24e-13 | 3 |
dense mesenchyme tissue | 1.74e-13 | 11 |
paraxial mesoderm | 1.74e-13 | 11 |
presumptive paraxial mesoderm | 1.74e-13 | 11 |
aorta | 2.41e-10 | 4 |
artery | 2.41e-10 | 4 |
systemic artery | 2.41e-10 | 4 |
arterial blood vessel | 2.41e-10 | 4 |
systemic arterial system | 2.41e-10 | 4 |
aortic system | 2.41e-10 | 4 |
arterial system | 2.41e-10 | 4 |
vessel | 2.31e-08 | 5 |
epithelial tube open at both ends | 2.31e-08 | 5 |
blood vessel | 2.31e-08 | 5 |
vasculature | 2.31e-08 | 5 |
vascular system | 2.31e-08 | 5 |
blood vasculature | 2.31e-08 | 5 |
vascular cord | 2.31e-08 | 5 |