FFCP PHASE1:Mm9::chrX:7853258..7853270,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:7853258..7853270,+|id=chrX:7853258..7853270,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000764,7.81e-25,3;CL:0000765,7.81e-25,3;CL:0000038,7.81e-25,3;CL:0000547,7.81e-25,3;CL:0000050,3.12e-22,9;CL:0000839,1.93e-15,13;CL:0000763,1.45e-12,16;CL:0002027,1.97e-11,3;CL:0002006,1.97e-11,3;CL:0002024,1.97e-11,3;CL:0000049,1.37e-10,19;CL:0002031,4.71e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,7.81e-25,3;DOID:0060083,7.81e-25,3;DOID:1240,7.81e-25,3;DOID:0050686,9.15e-13,6|ontology_enrichment_uberon=UBERON:0000466!5.47e-14!79;UBERON:0005177!8.63e-13!85;UBERON:0000464!1.87e-12!57;UBERON:0002100!3.05e-11!98;UBERON:0003886!6.97e-10!38;UBERON:0002553!1.85e-09!39;UBERON:0002323!5.33e-09!37;UBERON:0004458!5.33e-09!37;UBERON:0002075!9.24e-09!19;UBERON:0009569!3.97e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0001301,5.11e-12,3;UBERON:0006555,5.11e-12,3;UBERON:0005103,5.11e-12,3;UBERON:0000083,5.11e-12,3;UBERON:0009201,5.11e-12,3;UBERON:0004819,5.11e-12,3;UBERON:0006553,5.11e-12,3;UBERON:0003074,5.11e-12,3;UBERON:0003060,5.11e-12,3;UBERON:0000080,3.05e-09,4;UBERON:0005904,3.05e-09,4;UBERON:0006947,3.05e-09,4;UBERON:0002120,3.05e-09,4;UBERON:0004054,3.05e-09,4;UBERON:0004875,3.05e-09,4;UBERON:0004876,3.05e-09,4;UBERON:0005721,3.05e-09,4;UBERON:0005754,3.05e-09,4;UBERON:0007297,3.05e-09,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,2.09868563438444,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,1.27006134691926,2.46025915033828,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,1.03134418455488,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,3.11017426525233,15.9215337813215,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0.674586337154561,0.202860121388503,0,0.50925170356284,0.287696137450811,0.810676133875177,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.339490171550376,0,0.167506257441816,0.714130922658041,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98235415019888,2.18502572539483,0.906970670894253,1.13163047853539,0.885905678642318,0.614870295887855,0,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0,0.410082683163076,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.844780627453891,0.117357238645754,0.39061315453185,0.524296722128554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p@chrX:7853258..7853270,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:7853258..7853270,+ | |||
|description=CAGE_peak_at_chrX:7853258..7853270,+ | |||
|id=chrX:7853258..7853270,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.81e-25,3;CL:0000765,7.81e-25,3;CL:0000038,7.81e-25,3;CL:0000547,7.81e-25,3;CL:0000050,3.12e-22,9;CL:0000839,1.93e-15,13;CL:0000763,1.45e-12,16;CL:0002027,1.97e-11,3;CL:0002006,1.97e-11,3;CL:0002024,1.97e-11,3;CL:0000049,1.37e-10,19;CL:0002031,4.71e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.81e-25,3;DOID:0060083,7.81e-25,3;DOID:1240,7.81e-25,3;DOID:0050686,9.15e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0000466!5.47e-14!79;UBERON:0005177!8.63e-13!85;UBERON:0000464!1.87e-12!57;UBERON:0002100!3.05e-11!98;UBERON:0003886!6.97e-10!38;UBERON:0002553!1.85e-09!39;UBERON:0002323!5.33e-09!37;UBERON:0004458!5.33e-09!37;UBERON:0002075!9.24e-09!19;UBERON:0009569!3.97e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,5.11e-12,3;UBERON:0006555,5.11e-12,3;UBERON:0005103,5.11e-12,3;UBERON:0000083,5.11e-12,3;UBERON:0009201,5.11e-12,3;UBERON:0004819,5.11e-12,3;UBERON:0006553,5.11e-12,3;UBERON:0003074,5.11e-12,3;UBERON:0003060,5.11e-12,3;UBERON:0000080,3.05e-09,4;UBERON:0005904,3.05e-09,4;UBERON:0006947,3.05e-09,4;UBERON:0002120,3.05e-09,4;UBERON:0004054,3.05e-09,4;UBERON:0004875,3.05e-09,4;UBERON:0004876,3.05e-09,4;UBERON:0005721,3.05e-09,4;UBERON:0005754,3.05e-09,4;UBERON:0007297,3.05e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,2.09868563438444,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,1.27006134691926,2.46025915033828,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,1.03134418455488,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,3.11017426525233,15.9215337813215,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0.674586337154561,0.202860121388503,0,0.50925170356284,0.287696137450811,0.810676133875177,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.339490171550376,0,0.167506257441816,0.714130922658041,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98235415019888,2.18502572539483,0.906970670894253,1.13163047853539,0.885905678642318,0.614870295887855,0,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0,0.410082683163076,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.844780627453891,0.117357238645754,0.39061315453185,0.524296722128554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chrX:7853258..7853270,+ | |||
}} |
Latest revision as of 10:50, 6 August 2015
Short description: | p@chrX:7853258..7853270, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:7853258..7853270, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.81e-25 | 3 |
erythroblast | 7.81e-25 | 3 |
erythroid progenitor cell | 7.81e-25 | 3 |
proerythroblast | 7.81e-25 | 3 |
megakaryocyte-erythroid progenitor cell | 3.12e-22 | 9 |
myeloid lineage restricted progenitor cell | 1.93e-15 | 13 |
myeloid cell | 1.45e-12 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.97e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.97e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.97e-11 | 3 |
common myeloid progenitor | 1.37e-10 | 19 |
hematopoietic lineage restricted progenitor cell | 4.71e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
epididymis | 5.11e-12 | 3 |
excretory tube | 5.11e-12 | 3 |
mesonephric epithelium | 5.11e-12 | 3 |
mesonephric tubule | 5.11e-12 | 3 |
nephric duct | 5.11e-12 | 3 |
kidney epithelium | 5.11e-12 | 3 |
renal duct | 5.11e-12 | 3 |
mesonephric duct | 5.11e-12 | 3 |
pronephric duct | 5.11e-12 | 3 |
mesonephros | 3.05e-09 | 4 |
duct of male reproductive system | 3.05e-09 | 4 |
male genital duct | 3.05e-09 | 4 |
pronephros | 3.05e-09 | 4 |
internal male genitalia | 3.05e-09 | 4 |
nephrogenic cord | 3.05e-09 | 4 |
urogenital ridge | 3.05e-09 | 4 |
pronephric mesoderm | 3.05e-09 | 4 |
rostral part of nephrogenic cord | 3.05e-09 | 4 |
presumptive pronephric mesoderm | 3.05e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.81e-25 | 3 |
immune system cancer | 7.81e-25 | 3 |
leukemia | 7.81e-25 | 3 |
organ system cancer | 9.15e-13 | 6 |