FFCP PHASE2:Hg19::chr1:116383738..116383752,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4808 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7818 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7818 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q02577 | ||
|association_with_transcript=0bp_to_ENST00000320238,NM_005599,uc001efy.2_5end | |association_with_transcript=0bp_to_ENST00000320238,NM_005599,uc001efy.2_5end | ||
|cluster_id=chr1:116383738..116383752,- | |cluster_id=chr1:116383738..116383752,- | ||
Latest revision as of 08:15, 16 September 2015
| Short description: | p1@NHLH2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_NHLH2_5end |
| Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
| Association with transcript: | 0bp_to_ENST00000320238, NM_005599, uc001efy.2_5end |
| EntrezGene: | NHLH2 |
| HGNC: | 7818 |
| UniProt: | Q02577 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@NHLH2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Merkel cell | 5.48e-11 | 2 |
| neural cell | 5.43e-08 | 25 |
| Schwann cell | 3.32e-07 | 2 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| posterior neural tube | 3.86e-44 | 15 |
| chordal neural plate | 3.86e-44 | 15 |
| nervous system | 1.47e-43 | 89 |
| neural tube | 8.34e-43 | 56 |
| neural rod | 8.34e-43 | 56 |
| future spinal cord | 8.34e-43 | 56 |
| neural keel | 8.34e-43 | 56 |
| central nervous system | 4.10e-36 | 81 |
| regional part of nervous system | 2.12e-34 | 53 |
| regional part of brain | 2.12e-34 | 53 |
Showing 1 to 10 of 64 entries
