FFCP PHASE2:Hg19::chr10:119806435..119806460,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:22841 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:29152 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=22841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=29152 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q7L804,Q3I768 | ||
|association_with_transcript=-321bp_to_ENST00000355624,NM_014904,uc001ldj.1,uc009xyz.1_5end | |association_with_transcript=-321bp_to_ENST00000355624,NM_014904,uc001ldj.1,uc009xyz.1_5end | ||
|cluster_id=chr10:119806435..119806460,- | |cluster_id=chr10:119806435..119806460,- |
Latest revision as of 16:12, 16 September 2015
Short description: | p2@RAB11FIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB11FIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -321bp_to_ENST00000355624, NM_014904, uc001ldj.1, uc009xyz.1_5end |
EntrezGene: | RAB11FIP2 |
HGNC: | 29152 |
UniProt: | Q7L804Q3I768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@RAB11FIP2 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.68e-23 | 89 |
central nervous system | 5.79e-21 | 81 |
neural tube | 1.41e-19 | 56 |
neural rod | 1.41e-19 | 56 |
future spinal cord | 1.41e-19 | 56 |
neural keel | 1.41e-19 | 56 |
regional part of nervous system | 1.50e-18 | 53 |
regional part of brain | 1.50e-18 | 53 |
neurectoderm | 1.74e-18 | 86 |
neural plate | 5.92e-17 | 82 |
Showing 1 to 10 of 33 entries