FFCP PHASE2:Hg19::chr6:99282570..99282591,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5454 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9215 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9215 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P20265,B3KTH8 | ||
|association_with_transcript=0bp_to_ENST00000328345,NM_005604,uc003ppe.2_5end | |association_with_transcript=0bp_to_ENST00000328345,NM_005604,uc003ppe.2_5end | ||
|cluster_id=chr6:99282570..99282591,+ | |cluster_id=chr6:99282570..99282591,+ |
Latest revision as of 05:59, 20 September 2015
Short description: | p4@POU3F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POU3F2_5end |
Coexpression cluster: | C919_Neurons_Neural_parietal_Astrocyte_duodenum_occipital_temporal |
Association with transcript: | 0bp_to_ENST00000328345, NM_005604, uc003ppe.2_5end |
EntrezGene: | POU3F2 |
HGNC: | 9215 |
UniProt: | P20265B3KTH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@POU3F2 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.21e-15 | 25 |
neuronal stem cell | 1.07e-12 | 8 |
astrocyte of the cerebral cortex | 1.57e-12 | 3 |
oligodendrocyte | 2.73e-09 | 7 |
macroglial cell | 2.73e-09 | 7 |
astrocyte | 2.73e-09 | 7 |
oligodendrocyte precursor cell | 2.73e-09 | 7 |
Merkel cell | 4.87e-08 | 2 |
neurectodermal cell | 5.90e-08 | 59 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.42e-81 | 81 |
nervous system | 8.72e-80 | 89 |
neural tube | 8.53e-75 | 56 |
neural rod | 8.53e-75 | 56 |
future spinal cord | 8.53e-75 | 56 |
neural keel | 8.53e-75 | 56 |
regional part of nervous system | 3.27e-70 | 53 |
regional part of brain | 3.27e-70 | 53 |
telencephalon | 2.37e-65 | 34 |
brain grey matter | 4.34e-65 | 34 |
Showing 1 to 10 of 77 entries