FF:11917-125G9: Difference between revisions

Revision as of 15:50, 15 May 2017

Name:	CD4+CD25-CD45RA+ naive conventional T cells expanded, donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs13814
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	male
age	23
cell type	T cell
cell line	NA
company	NA
collaboration	Michael Rehli (University of Regensberg)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	61-62
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005705

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13814		CAGE		DRX008189		DRR009061

Accession ID Hg19

Library id		BAM		CTSS
CNhs13814		DRZ000486		DRZ001871

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.106
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0837
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.285
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.106
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.106
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.106
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.0874
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.281
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.123
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.734
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.142
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.137
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.106
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.151
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.106
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.756
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.876
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.603
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.351
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.377
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.5
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.377
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.106
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.323
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.246
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.191
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.974
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.867
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13814

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	4.95159e-6
MA0003.1	MA0003.1	0.903
MA0004.1	MA0004.1	0.862
MA0006.1	MA0006.1	0.447
MA0007.1	MA0007.1	0.874
MA0009.1	MA0009.1	0.541
MA0014.1	MA0014.1	0.687
MA0017.1	MA0017.1	0.335
MA0018.2	MA0018.2	0.596
MA0019.1	MA0019.1	0.18
MA0024.1	MA0024.1	0.0512
MA0025.1	MA0025.1	0.129
MA0027.1	MA0027.1	0.468
MA0028.1	MA0028.1	1.49964e-4
MA0029.1	MA0029.1	0.562
MA0030.1	MA0030.1	0.274
MA0031.1	MA0031.1	0.765
MA0035.2	MA0035.2	0.21
MA0038.1	MA0038.1	0.063
MA0039.2	MA0039.2	0.603
MA0040.1	MA0040.1	0.236
MA0041.1	MA0041.1	0.197
MA0042.1	MA0042.1	0.437
MA0043.1	MA0043.1	0.107
MA0046.1	MA0046.1	0.0454
MA0047.2	MA0047.2	0.933
MA0048.1	MA0048.1	0.675
MA0050.1	MA0050.1	3.31302e-6
MA0051.1	MA0051.1	0.0342
MA0052.1	MA0052.1	0.0124
MA0055.1	MA0055.1	0.518
MA0057.1	MA0057.1	0.855
MA0058.1	MA0058.1	0.964
MA0059.1	MA0059.1	0.282
MA0060.1	MA0060.1	0.987
MA0061.1	MA0061.1	0.0583
MA0062.2	MA0062.2	8.86034e-12
MA0065.2	MA0065.2	0.0432
MA0066.1	MA0066.1	0.488
MA0067.1	MA0067.1	0.885
MA0068.1	MA0068.1	0.916
MA0069.1	MA0069.1	0.856
MA0070.1	MA0070.1	0.509
MA0071.1	MA0071.1	0.592
MA0072.1	MA0072.1	0.928
MA0073.1	MA0073.1	0.773
MA0074.1	MA0074.1	0.777
MA0076.1	MA0076.1	6.07993e-6
MA0077.1	MA0077.1	0.0501
MA0078.1	MA0078.1	0.737
MA0079.2	MA0079.2	0.393
MA0080.2	MA0080.2	1.20144e-10
MA0081.1	MA0081.1	0.0484
MA0083.1	MA0083.1	0.041
MA0084.1	MA0084.1	0.667
MA0087.1	MA0087.1	0.369
MA0088.1	MA0088.1	0.0633
MA0090.1	MA0090.1	6.2363e-4
MA0091.1	MA0091.1	0.954
MA0092.1	MA0092.1	0.635
MA0093.1	MA0093.1	0.799
MA0099.2	MA0099.2	5.22055e-6
MA0100.1	MA0100.1	0.704
MA0101.1	MA0101.1	0.817
MA0102.2	MA0102.2	0.365
MA0103.1	MA0103.1	0.0753
MA0104.2	MA0104.2	0.19
MA0105.1	MA0105.1	2.1504e-5
MA0106.1	MA0106.1	0.902
MA0107.1	MA0107.1	0.385
MA0108.2	MA0108.2	1.09637e-10
MA0111.1	MA0111.1	0.0663
MA0112.2	MA0112.2	0.128
MA0113.1	MA0113.1	0.849
MA0114.1	MA0114.1	0.251
MA0115.1	MA0115.1	0.608
MA0116.1	MA0116.1	9.14898e-5
MA0117.1	MA0117.1	0.858
MA0119.1	MA0119.1	0.751
MA0122.1	MA0122.1	0.829
MA0124.1	MA0124.1	0.379
MA0125.1	MA0125.1	0.343
MA0131.1	MA0131.1	0.2
MA0135.1	MA0135.1	0.029
MA0136.1	MA0136.1	7.38462e-19
MA0137.2	MA0137.2	0.711
MA0138.2	MA0138.2	0.438
MA0139.1	MA0139.1	0.0204
MA0140.1	MA0140.1	0.334
MA0141.1	MA0141.1	0.562
MA0142.1	MA0142.1	0.207
MA0143.1	MA0143.1	0.099
MA0144.1	MA0144.1	0.944
MA0145.1	MA0145.1	0.43
MA0146.1	MA0146.1	0.0892
MA0147.1	MA0147.1	0.157
MA0148.1	MA0148.1	0.532
MA0149.1	MA0149.1	0.0622
MA0150.1	MA0150.1	0.161
MA0152.1	MA0152.1	0.0192
MA0153.1	MA0153.1	0.0937
MA0154.1	MA0154.1	0.0369
MA0155.1	MA0155.1	0.709
MA0156.1	MA0156.1	1.36055e-14
MA0157.1	MA0157.1	0.364
MA0159.1	MA0159.1	0.47
MA0160.1	MA0160.1	0.639
MA0162.1	MA0162.1	0.729
MA0163.1	MA0163.1	3.68479e-12
MA0164.1	MA0164.1	0.826
MA0258.1	MA0258.1	0.0358
MA0259.1	MA0259.1	0.412

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13814

Novel motif	Logo	P-value
1	1	0.0806
10	10	0.00508
100	100	0.469
101	101	0.0952
102	102	0.473
103	103	0.799
104	104	0.589
105	105	0.255
106	106	0.41
107	107	0.462
108	108	0.846
109	109	0.108
11	11	0.0398
110	110	0.395
111	111	0.27
112	112	0.285
113	113	0.318
114	114	0.439
115	115	0.27
116	116	0.515
117	117	0.00407
118	118	0.357
119	119	0.551
12	12	0.581
120	120	0.782
121	121	0.964
122	122	0.669
123	123	6.73911e-7
124	124	0.334
125	125	0.948
126	126	0.463
127	127	0.725
128	128	0.751
129	129	0.339
13	13	0.469
130	130	0.659
131	131	0.62
132	132	0.61
133	133	0.364
134	134	0.668
135	135	0.837
136	136	0.721
137	137	0.243
138	138	0.317
139	139	0.194
14	14	0.491
140	140	0.019
141	141	0.539
142	142	0.701
143	143	0.00451
144	144	0.442
145	145	0.135
146	146	0.662
147	147	0.216
148	148	0.0613
149	149	0.868
15	15	0.273
150	150	0.603
151	151	0.542
152	152	0.339
153	153	0.932
154	154	0.496
155	155	0.0623
156	156	0.851
157	157	0.19
158	158	0.22
159	159	0.505
16	16	0.729
160	160	0.287
161	161	0.168
162	162	0.447
163	163	0.287
164	164	0.0628
165	165	0.642
166	166	0.78
167	167	0.139
168	168	0.628
169	169	0.344
17	17	0.915
18	18	0.981
19	19	0.645
2	2	0.912
20	20	0.522
21	21	0.168
22	22	0.834
23	23	0.504
24	24	0.932
25	25	0.0669
26	26	0.0335
27	27	0.239
28	28	0.712
29	29	0.0148
3	3	0.0389
30	30	0.08
31	31	0.991
32	32	0.526
33	33	0.643
34	34	0.938
35	35	0.224
36	36	0.0188
37	37	0.297
38	38	0.544
39	39	0.36
4	4	0.968
40	40	0.289
41	41	0.74
42	42	0.0931
43	43	0.397
44	44	0.502
45	45	0.412
46	46	0.11
47	47	0.0163
48	48	0.0469
49	49	0.0982
5	5	0.795
50	50	1
51	51	0.716
52	52	0.347
53	53	0.117
54	54	0.794
55	55	0.595
56	56	0.4
57	57	0.177
58	58	0.0814
59	59	0.422
6	6	0.394
60	60	0.496
61	61	0.128
62	62	0.0538
63	63	0.357
64	64	0.154
65	65	0.787
66	66	0.672
67	67	0.515
68	68	0.958
69	69	0.986
7	7	0.238
70	70	0.111
71	71	0.0308
72	72	0.17
73	73	0.546
74	74	0.538
75	75	0.0125
76	76	0.195
77	77	0.41
78	78	0.0155
79	79	0.499
8	8	0.432
80	80	0.248
81	81	0.343
82	82	0.0926
83	83	0.407
84	84	0.0336
85	85	0.702
86	86	0.248
87	87	0.663
88	88	0.796
89	89	0.237
9	9	0.871
90	90	0.049
91	91	0.274
92	92	0.451
93	93	0.309
94	94	0.144
95	95	0.0121
96	96	0.176
97	97	0.239
98	98	0.402
99	99	0.367

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13814

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr7:50343634..50343717,+!p2@IKZF1!1.82!65.22!IKZF1;;chr10:8096772..8096787,+!p2@GATA3!1.65!51.12!GATA3;;chr2:192015701..192015743,-!p1@STAT4!1.62!54.99!STAT4;;chr10:8096631..8096660,+!p1@GATA3!1.61!48.08!GATA3;;chr3:18486354..18486377,-!p2@SATB1!1.56!43.94!SATB1;;chr7:50344289..50344323,+!p1@IKZF1!1.55!34.54!IKZF1;;chr17:1959369..1959388,+!p2@HIC1!1.52!82.91!HIC1;;chr20:50159198..50159299,-!p1@NFATC2!1.51!45.60!NFATC2;;chr2:231090433..231090469,+!p1@SP140!1.45!27.36!SP140;;chr6:391743..391759,+!p1@IRF4!1.44!26.81!IRF4;;chr2:192015750..192015793,-!p2@STAT4!1.43!34.82!STAT4;;chr1:25291475..25291511,-!p2@RUNX3!1.43!25.70!RUNX3;;chr7:50344251..50344288,+!p3@IKZF1!1.42!25.42!IKZF1;;chr9:117150254..117150271,-!p1@AKNA!1.40!64.11!AKNA;;chr8:60031619..60031676,-!p1@TOX!1.40!51.40!TOX;;chr1:92951607..92951661,-!p1@GFI1!1.40!24.32!GFI1;;chr5:133450365..133450444,+!p1@TCF7!1.37!98.66!TCF7;;chr7:50343895..50343936,+!p5@IKZF1!1.34!20.73!IKZF1;;chr14:75988771..75988826,+!p1@BATF!1.33!26.81!BATF;;chr16:68119324..68119364,+!p1@NFATC3!1.32!86.50!NFATC3;;chrY:21906594..21906622,-!p1@KDM5D!1.31!19.34!KDM5D;;chr7:50348268..50348366,+!p4@IKZF1!1.29!18.52!IKZF1;;chr20:56195474..56195506,-!p1@ZBP1!1.28!17.96!ZBP1;;chr3:63953435..63953499,+!p1@ATXN7!1.22!15.75!ATXN7;;chr6:91006518..91006570,-!p1@BACH2!1.21!34.54!BACH2;;chr14:99738138..99738163,-!p1@BCL11B!1.19!14.37!BCL11B;;chr10:8095593..8095625,+!p3@GATA3!1.18!16.58!GATA3;;chr4:109087445..109087463,-!p1@LEF1!1.17!13.82!LEF1;;chr4:109089901..109089930,-!p3@LEF1!1.17!13.82!LEF1;;chr3:71355163..71355209,-!p5@FOXP1!1.16!18.79!FOXP1;;chr5:133451294..133451310,+!p2@TCF7!1.16!13.54!TCF7;;chr19:19729477..19729542,-!p1@PBX4!1.14!27.36!PBX4;;chr20:56195525..56195556,-!p2@ZBP1!1.10!11.61!ZBP1;;chr13:41593425..41593480,-!p1@ELF1!1.06!67.71!ELF1;;chr2:231090471..231090504,+!p2@SP140!0.99!8.84!SP140;;chr7:77428066..77428132,+!p2@PHTF2!0.97!55.27!PHTF2;;chr6:15401104..15401166,+!p5@JARID2!0.97!8.29!JARID2;;chr17:45810594..45810608,+!p1@TBX21!0.95!8.01!TBX21;;chr5:176738887..176738934,-!p1@MXD3!0.94!53.34!MXD3;;chr2:97202991..97203043,+!p3@ARID5A!0.94!7.74!ARID5A;;chr4:109090075..109090095,-!p2@LEF1!0.94!7.74!LEF1;;chr19:16435625..16435682,+!p1@KLF2!0.93!251.20!KLF2;;chr20:52226313..52226350,-!p3@ZNF217!0.93!7.46!ZNF217;;chr2:8822176..8822196,+!p1@ID2!0.92!1067.26!ID2;;chr3:18466787..18466839,-!p1@SATB1!0.92!33.71!SATB1;;chr1:25256756..25256774,-!p1@RUNX3!0.91!13.82!RUNX3;;chr17:46621146..46621180,-!p10@HOXB2!0.91!7.19!HOXB2;;chr3:71007344..71007348,-!p6@FOXP1!0.90!29.29!FOXP1;;chr21:36421535..36421610,-!p2@RUNX1!0.90!25.98!RUNX1;;chr2:214015343..214015366,-!p3@IKZF2!0.90!6.91!IKZF2;;chr3:18480217..18480239,-!p3@SATB1!0.90!6.91!SATB1;;chr11:47236584..47236679,+!p1@DDB2!0.89!77.10!DDB2;;chr5:131826457..131826514,-!p1@IRF1!0.88!274.14!IRF1;;chr16:79634595..79634620,-!p2@MAF!0.88!12.44!MAF;;chr12:56415246..56415286,+!p2@IKZF4!0.88!6.63!IKZF4;;chr1:92949331..92949377,-!p2@GFI1!0.87!6.36!GFI1;;chr4:109088089..109088101,-!p11@LEF1!0.87!6.36!LEF1;;chr11:128392085..128392232,-!p1@ETS1!0.85!218.87!ETS1;;chr10:35484053..35484076,+!p1@CREM!0.85!16.03!CREM;;chr1:23857698..23857733,-!p1@E2F2!0.85!11.61!E2F2;;chr3:71542684..71542720,-!p18@FOXP1!0.85!6.08!FOXP1;;chr7:137620650..137620677,-!p3@CREB3L2!0.85!6.08!CREB3L2;;chr8:60031563..60031574,-!p7@TOX!0.85!6.08!TOX;;chr14:99738059..99738086,-!p2@BCL11B!0.85!6.08!BCL11B;;chrX:49121165..49121179,-!p1@FOXP3!0.85!6.08!FOXP3;;chrX:134477924..134477988,-!p1@ZNF75D!0.84!23.77!ZNF75D;;chr6:45390269..45390298,+!p5@RUNX2!0.84!10.22!RUNX2;;chr11:128563948..128564003,+!p1@FLI1!0.83!73.79!FLI1;;chr16:79634624..79634642,-!p1@MAF!0.83!24.04!MAF;;chr6:106546808..106546833,+!p3@PRDM1!0.83!7.46!PRDM1;;chrY:2803415..2803468,+!p1@ZFY!0.83!5.80!ZFY;;chr5:321810..321877,+!p1@AHRR!0.82!18.79!AHRR;;chr16:89787937..89787971,+!p1@ZNF276!0.82!15.48!ZNF276;;chr17:46621101..46621143,-!p7@HOXB2!0.82!7.74!HOXB2;;chr16:88752889..88752921,-!p1@SNAI3!0.82!6.63!SNAI3;;chr11:113930425..113930471,+!p1@ZBTB16!0.81!8.01!ZBTB16;;chr3:18487057..18487105,-!p4@SATB1!0.80!5.25!SATB1;;chr4:109088940..109089037,-!p4@LEF1!0.80!5.25!LEF1;;chr17:38020392..38020477,-!p1@IKZF3!0.80!5.25!IKZF3;;chr7:137620684..137620711,-!p4@CREB3L2!0.80!5.25!CREB3L2;;chr6:15249128..15249177,+!p4@JARID2!0.79!9.67!JARID2;;chr7:128577972..128578047,+!p1@IRF5!0.79!8.57!IRF5;;chr7:50343864..50343888,+!p7@IKZF1!0.78!4.97!IKZF1;;chr21:36421147..36421193,-!p10@RUNX1!0.78!4.97!RUNX1;;chr17:56565257..56565283,-!p2@HSF5!0.78!4.97!HSF5;;chr3:71179699..71179744,-!p2@FOXP1!0.76!38.97!FOXP1;;chr14:64970670..64970712,-!p3@ZBTB25!0.76!11.05!ZBTB25;;chr4:109089996..109090012,-!p5@LEF1!0.76!4.70!LEF1;;chr14:99737850..99737852,-!p3@BCL11B!0.76!4.70!BCL11B;;chr15:60884706..60884743,-!p1@RORA!0.74!25.70!RORA;;chr2:214015111..214015179,-!p1@IKZF2!0.74!8.57!IKZF2;;chr17:40440481..40440550,+!p1@STAT5A!0.73!34.82!STAT5A;;chr14:64971288..64971316,-!p2@ZBTB25!0.73!14.92!ZBTB25;;chr2:148778973..148779035,+!p3@MBD5!0.73!12.44!MBD5;;chr3:27763807..27763822,-!p1@EOMES!0.73!4.42!EOMES;;chr10:8097321..8097348,+!p4@GATA3!0.73!4.42!GATA3;;chr9:20622444..20622468,-!p2@MLLT3!0.72!15.20!MLLT3;;chr19:19779619..19779670,+!p1@ZNF101!0.72!12.99!ZNF101;;chr8:71316428..71316459,-!p2@NCOA2!0.72!7.46!NCOA2;;chr2:231084659..231084721,-!p1@SP110!0.71!110.26!SP110;;chr4:109089290..109089320,-!p14@LEF1!0.71!4.15!LEF1;;chr5:133451347..133451358,+!p3@TCF7!0.71!4.15!TCF7;;chr1:158979686..158979745,+!p1@IFI16!0.70!151.16!IFI16;;chr14:90085458..90085557,-!p1@FOXN3!0.70!47.53!FOXN3;;chr9:20622478..20622525,-!p1@MLLT3!0.70!36.20!MLLT3;;chr13:41240717..41240735,-!p2@FOXO1!0.70!31.23!FOXO1;;chr10:104154246..104154347,+!p3@NFKB2!0.70!27.64!NFKB2;;chr4:185395633..185395651,-!p2@IRF2!0.70!6.91!IRF2;;chr4:57522166..57522260,-!p2@HOPX!0.70!4.70!HOPX;;chr10:35484804..35484902,+!p2@CREM!0.69!16.86!CREM;;chr7:21467802..21467840,+!p3@SP4!0.69!8.84!SP4;;chr20:32274150..32274166,-!p2@E2F1!0.69!7.74!E2F1;;chr3:18466660..18466676,-!p5@SATB1!0.69!4.70!SATB1;;chr6:152011654..152011682,+!p1@ESR1!0.69!3.87!ESR1;;chr14:75988831..75988847,+!p2@BATF!0.69!3.87!BATF;;chr12:56415287..56415300,+!p5@IKZF4!0.69!3.87!IKZF4;;chr19:52674696..52674758,-!p1@ZNF836!0.68!12.44!ZNF836;;chr9:20621927..20621996,-!p3@MLLT3!0.68!6.91!MLLT3;;chr19:12405606..12405629,-!p2@ZNF44!0.66!7.74!ZNF44;;chr12:432372..432377,-!p3@KDM5A!0.66!6.08!KDM5A;;chr1:3569072..3569093,+!p1@TP73!0.66!3.59!TP73;;chr6:91006503..91006517,-!p3@BACH2!0.66!3.59!BACH2;;chr2:242556900..242556916,-!p6@THAP4!0.66!3.59!THAP4;;chr4:57522598..57522664,-!p3@HOPX!0.66!3.59!HOPX;;chr13:41240737..41240787,-!p1@FOXO1!0.65!48.64!FOXO1;;chr12:53614115..53614154,-!p1@RARG!0.65!21.56!RARG;;chr4:185395590..185395627,-!p3@IRF2!0.65!4.42!IRF2;;chr2:208394817..208394834,+!p3@CREB1!0.64!15.48!CREB1;;chr16:68118689..68118733,+!p3@NFATC3!0.64!9.67!NFATC3;;chr10:35415951..35415975,+!p8@CREM!0.64!4.97!CREM;;chr4:185395191..185395226,-!p4@IRF2!0.64!4.97!IRF2;;chr11:19263160..19263176,-!p1@E2F8!0.64!4.15!E2F8;;chr6:106546786..106546802,+!p6@PRDM1!0.64!3.32!PRDM1;;chr2:214014959..214015006,-!p4@IKZF2!0.64!3.32!IKZF2;;chr4:109086281..109086319,-!p9@LEF1!0.64!3.32!LEF1;;chr4:57522674..57522699,-!p5@HOPX!0.64!3.32!HOPX;;chr1:149858461..149858479,+!p1@BOLA1!0.63!1529.04!BOLA1;;chr19:9546177..9546224,-!p1@ZNF266!0.63!27.08!ZNF266;;chr17:46622205..46622218,-!p3@HOXB2!0.63!3.87!HOXB2;;chr17:61920280..61920343,-!p2@SMARCD2!0.62!36.20!SMARCD2;;chr14:74226961..74227020,-!p1@C14orf43!0.62!24.87!C14orf43;;chr11:128392273..128392308,-!p2@ETS1!0.62!15.75!ETS1;;chr4:103422499..103422632,+!p1@NFKB1!0.61!77.38!NFKB1;;chr11:67007548..67007610,+!p3@KDM2A!0.61!27.08!KDM2A;;chr17:1958388..1958404,+!p1@HIC1!0.61!23.21!HIC1;;chr6:143266297..143266356,-!p1@HIVEP2!0.61!17.69!HIVEP2;;chr11:113930291..113930339,+!p2@ZBTB16!0.61!5.53!ZBTB16;;chr8:60031534..60031553,-!p8@TOX!0.61!3.04!TOX;;chr3:18465604..18465618,-!p9@SATB1!0.61!3.04!SATB1;;chr4:109088130..109088163,-!p13@LEF1!0.61!3.04!LEF1;;chr21:36421347..36421380,-!p8@RUNX1!0.61!3.04!RUNX1;;chr15:31619326..31619390,+!p2@KLF13!0.60!41.73!KLF13;;chr6:20402102..20402152,+!p1@E2F3!0.60!14.37!E2F3;;chr17:46621937..46621966,-!p2@HOXB2!0.60!9.40!HOXB2;;chr13:74708475..74708499,-!p5@KLF12!0.60!7.74!KLF12;;chr14:73360799..73360817,-!p1@DPF3!0.59!11.88!DPF3;;chr10:35416142..35416169,+!p3@CREM!0.59!8.84!CREM;;chr16:68119440..68119480,+!p4@NFATC3!0.59!5.25!NFATC3;;chr6:135502501..135502546,+!p1@MYB!0.59!3.59!MYB;;chr15:31619013..31619095,+!p1@KLF13!0.58!81.25!KLF13;;chr2:97202480..97202499,+!p1@ARID5A!0.58!35.10!ARID5A;;chr15:74833584..74833626,+!p1@ARID3B!0.58!7.46!ARID3B;;chr19:35455110..35455149,-!p1@ZNF792!0.58!6.08!ZNF792;;chr2:242556880..242556899,-!p5@THAP4!0.58!2.76!THAP4;;chr3:71542747..71542766,-!p34@FOXP1!0.58!2.76!FOXP1;;chr7:50344144..50344157,+!p6@IKZF1!0.58!2.76!IKZF1;;chrY:21906761..21906810,-!p2@KDM5D!0.58!2.76!KDM5D;;chr1:249132410..249132456,+!p1@ZNF672!0.57!24.87!ZNF672;;chr2:238600933..238600985,+!p3@LRRFIP1!0.57!17.96!LRRFIP1;;chr16:89787973..89788001,+!p3@ZNF276!0.57!5.80!ZNF276;;chr12:46123273..46123329,+!p3@ARID2!0.57!5.25!ARID2;;chr9:86593238..86593252,-!p3@HNRNPK!0.57!4.42!HNRPK;;chr3:187463179..187463201,-!p2@BCL6!0.56!12.99!BCL6;;chrX:101186981..101187030,-!p1@ZMAT1!0.56!10.22!ZMAT1;;chr14:65569101..65569119,-!p3@MAX!0.56!9.95!MAX;;chr16:8962544..8962584,-!p2@CARHSP1!0.56!6.91!CARHSP1;;chr1:211432887..211432903,+!p4@RCOR3!0.56!6.91!RCOR3;;chr7:99156393..99156433,+!p6@ZNF655!0.56!6.91!ZNF655;;chr20:44600199..44600219,-!p3@ZNF335!0.56!3.87!ZNF335;;chr6:31126291..31126399,+!p1@TCF19!0.55!30.12!TCF19;;chr16:71918033..71918101,-!p1@ZNF821!0.55!11.61!ZNF821;;chr18:77155922..77155939,+!p1@NFATC1!0.55!8.29!NFATC1;;chr15:90544532..90544563,+!p1@ZNF710!0.55!5.80!ZNF710;;chr6:45390300..45390335,+!p4@RUNX2!0.55!4.42!RUNX2;;chr9:32550965..32551031,-!p4@TOPORS!0.55!4.42!TOPORS;;chr6:91006575..91006602,-!p2@BACH2!0.55!4.15!BACH2;;chr19:49140609..49140643,-!p1@DBP!0.54!17.41!DBP;;chr19:56111680..56111716,+!p1@ZNF524!0.54!11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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11917-125G9: Difference between revisions

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Revision as of 15:50, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0