FFCP PHASE1:Hg19::chr10:26986102..26986129,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23590 | |EntrezGene=23590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17759 | |HGNC=17759 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T2R2 | |UniProt=Q5T2R2 | ||
|association_with_transcript=-458bp_to_ENST00000376215_5end | |association_with_transcript=-458bp_to_ENST00000376215_5end | ||
|cluster_id=chr10:26986102..26986129,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_4_at_PDSS1_5end | |description=CAGE_peak_4_at_PDSS1_5end | ||
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|ontology_enrichment_celltype=CL:0000860!8.75e-48!45;CL:0002057!1.56e-47!42;CL:0002194!6.77e-46!63;CL:0000576!6.77e-46!63;CL:0000040!6.77e-46!63;CL:0000559!6.77e-46!63;CL:0002009!5.43e-44!65;CL:0000839!1.04e-39!70;CL:0000557!6.33e-39!71;CL:0000766!6.41e-39!76;CL:0000763!5.97e-34!112;CL:0000049!5.97e-34!112;CL:0002087!6.68e-30!119;CL:0000037!1.77e-28!172;CL:0000566!1.77e-28!172;CL:0000988!1.32e-26!182;CL:0000738!4.75e-26!140;CL:0002032!6.78e-26!165;CL:0000837!6.78e-26!165;CL:0002031!2.35e-25!124 | |ontology_enrichment_celltype=CL:0000860!8.75e-48!45;CL:0002057!1.56e-47!42;CL:0002194!6.77e-46!63;CL:0000576!6.77e-46!63;CL:0000040!6.77e-46!63;CL:0000559!6.77e-46!63;CL:0002009!5.43e-44!65;CL:0000839!1.04e-39!70;CL:0000557!6.33e-39!71;CL:0000766!6.41e-39!76;CL:0000763!5.97e-34!112;CL:0000049!5.97e-34!112;CL:0002087!6.68e-30!119;CL:0000037!1.77e-28!172;CL:0000566!1.77e-28!172;CL:0000988!1.32e-26!182;CL:0000738!4.75e-26!140;CL:0002032!6.78e-26!165;CL:0000837!6.78e-26!165;CL:0002031!2.35e-25!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.55e-94;33!CL:0002057;2.55e-94;33!CL:0000473;1.25e-65;39!CL:0000234;1.25e-65;39!CL:0000576;3.66e-56;48!CL:0000766;3.34e-31;69!CL:0002087;6.04e-16;104!CL:0000763;7.13e-14;100!CL:0000738;5.89e-10;136!CL:0002393;1.15e-08;6!CL:0002397;1.15e-08;6 | |ontology_enrichment_celltype_v019=CL:0000860;2.55e-94;33!CL:0002057;2.55e-94;33!CL:0000473;1.25e-65;39!CL:0000234;1.25e-65;39!CL:0000576;3.66e-56;48!CL:0000766;3.34e-31;69!CL:0002087;6.04e-16;104!CL:0000763;7.13e-14;100!CL:0000738;5.89e-10;136!CL:0002393;1.15e-08;6!CL:0002397;1.15e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.03e-102,42;CL:0002057,3.03e-102,42;CL:0000473,9.97e-89,48;CL:0000234,9.97e-89,48;CL:0002194,1.71e-85,59;CL:0000576,1.71e-85,59;CL:0000040,1.71e-85,59;CL:0000559,1.71e-85,59;CL:0002009,1.55e-82,61;CL:0000839,6.51e-76,66;CL:0000557,1.05e-74,67;CL:0000766,3.67e-69,72;CL:0000763,2.61e-47,108;CL:0000049,2.61e-47,108;CL:0002087,5.23e-44,115;CL:0002031,3.16e-39,120;CL:0000738,2.82e-36,136;CL:0000037,3.30e-30,168;CL:0002032,1.01e-29,161;CL:0000837,1.01e-29,161;CL:0000988,2.39e-28,177;CL:0000134,8.12e-12,354;CL:0002320,1.87e-11,361;CL:0000219,3.52e-10,386;CL:0000048,1.29e-08,427;CL:0000723,2.11e-08,433;CL:0000034,4.02e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-73;42!CL:0000049;7.28e-13;108 | |ontology_enrichment_development_v019=CL:0002057;4.15e-73;42!CL:0000049;7.28e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.33e-37!102;UBERON:0003061!8.33e-37!102;UBERON:0002371!1.69e-34!80;UBERON:0002193!2.68e-33!112;UBERON:0001474!5.66e-31!86;UBERON:0002405!1.04e-26!115;UBERON:0004765!4.89e-24!101;UBERON:0001434!4.89e-24!101;UBERON:0002204!7.52e-11!167;UBERON:0003081!1.18e-10!216 | |ontology_enrichment_uberon=UBERON:0002390!8.33e-37!102;UBERON:0003061!8.33e-37!102;UBERON:0002371!1.69e-34!80;UBERON:0002193!2.68e-33!112;UBERON:0001474!5.66e-31!86;UBERON:0002405!1.04e-26!115;UBERON:0004765!4.89e-24!101;UBERON:0001434!4.89e-24!101;UBERON:0002204!7.52e-11!167;UBERON:0003081!1.18e-10!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.03e-65,76;UBERON:0001474,4.48e-60,82;UBERON:0004765,3.05e-54,90;UBERON:0002390,1.16e-52,98;UBERON:0003061,1.16e-52,98;UBERON:0002405,2.61e-52,93;UBERON:0001434,3.01e-48,100;UBERON:0002193,3.03e-47,108;UBERON:0002204,2.21e-28,167;UBERON:0003081,3.17e-22,203;UBERON:0000926,4.27e-14,315;UBERON:0004120,4.27e-14,315;UBERON:0006603,4.27e-14,315;UBERON:0002384,5.82e-11,371 | |||
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| ||
|short_description=p4@PDSS1 | |short_description=p4@PDSS1 | ||
}} | }} |
Latest revision as of 18:20, 17 September 2015
Short description: | p4@PDSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDSS1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -458bp_to_ENST00000376215_5end |
EntrezGene: | PDSS1 |
HGNC: | 17759 |
UniProt: | Q5T2R2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.03e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.03e-102 | 42 |
defensive cell | 9.97e-89 | 48 |
phagocyte | 9.97e-89 | 48 |
monopoietic cell | 1.71e-85 | 59 |
monocyte | 1.71e-85 | 59 |
monoblast | 1.71e-85 | 59 |
promonocyte | 1.71e-85 | 59 |
macrophage dendritic cell progenitor | 1.55e-82 | 61 |
myeloid lineage restricted progenitor cell | 6.51e-76 | 66 |
granulocyte monocyte progenitor cell | 1.05e-74 | 67 |
myeloid leukocyte | 3.67e-69 | 72 |
myeloid cell | 2.61e-47 | 108 |
common myeloid progenitor | 2.61e-47 | 108 |
nongranular leukocyte | 5.23e-44 | 115 |
hematopoietic lineage restricted progenitor cell | 3.16e-39 | 120 |
leukocyte | 2.82e-36 | 136 |
hematopoietic stem cell | 3.30e-30 | 168 |
hematopoietic oligopotent progenitor cell | 1.01e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-29 | 161 |
hematopoietic cell | 2.39e-28 | 177 |
mesenchymal cell | 8.12e-12 | 354 |
connective tissue cell | 1.87e-11 | 361 |
motile cell | 3.52e-10 | 386 |
multi fate stem cell | 1.29e-08 | 427 |
somatic stem cell | 2.11e-08 | 433 |
stem cell | 4.02e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.03e-65 | 76 |
bone element | 4.48e-60 | 82 |
skeletal element | 3.05e-54 | 90 |
hematopoietic system | 1.16e-52 | 98 |
blood island | 1.16e-52 | 98 |
immune system | 2.61e-52 | 93 |
skeletal system | 3.01e-48 | 100 |
hemolymphoid system | 3.03e-47 | 108 |
musculoskeletal system | 2.21e-28 | 167 |
lateral plate mesoderm | 3.17e-22 | 203 |
mesoderm | 4.27e-14 | 315 |
mesoderm-derived structure | 4.27e-14 | 315 |
presumptive mesoderm | 4.27e-14 | 315 |
connective tissue | 5.82e-11 | 371 |