FFCP PHASE1:Hg19::chr14:105944261..105944276,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:105944261..105944276,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr14:105944261..105944276,+ | |description=CAGE_peak_at_chr14:105944261..105944276,+ | ||
|id=chr14:105944261..105944276,+ | |id=chr14:105944261..105944276,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.68e-35!18;CL:0000789!1.68e-35!18;CL:0002420!1.68e-35!18;CL:0002419!1.68e-35!18;CL:0000790!1.68e-35!18;CL:0000838!9.16e-31!52;CL:0000542!5.14e-30!53;CL:0000051!5.14e-30!53;CL:0000625!1.16e-24!11;CL:0000084!4.02e-24!25;CL:0000827!4.02e-24!25;CL:0002087!2.29e-16!119;CL:0000624!7.71e-15!6;CL:0000738!2.44e-13!140;CL:0002031!3.27e-12!124;CL:0000236!5.52e-12!14;CL:0000037!4.57e-09!172;CL:0000566!4.57e-09!172;CL:0000898!3.03e-08!3;CL:0000988!4.56e-08!182;CL:0002032!1.03e-07!165;CL:0000837!1.03e-07!165;CL:0000623!1.53e-07!3;CL:0000825!1.53e-07!3;CL:0000842!1.56e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.68e-35!18;CL:0000789!1.68e-35!18;CL:0002420!1.68e-35!18;CL:0002419!1.68e-35!18;CL:0000790!1.68e-35!18;CL:0000838!9.16e-31!52;CL:0000542!5.14e-30!53;CL:0000051!5.14e-30!53;CL:0000625!1.16e-24!11;CL:0000084!4.02e-24!25;CL:0000827!4.02e-24!25;CL:0002087!2.29e-16!119;CL:0000624!7.71e-15!6;CL:0000738!2.44e-13!140;CL:0002031!3.27e-12!124;CL:0000236!5.52e-12!14;CL:0000037!4.57e-09!172;CL:0000566!4.57e-09!172;CL:0000898!3.03e-08!3;CL:0000988!4.56e-08!182;CL:0002032!1.03e-07!165;CL:0000837!1.03e-07!165;CL:0000623!1.53e-07!3;CL:0000825!1.53e-07!3;CL:0000842!1.56e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.28e-55;18!CL:0000789;8.28e-55;18!CL:0002419;8.28e-55;18!CL:0000084;1.24e-38;25!CL:0000624;2.21e-31;6!CL:0000625;7.85e-30;11!CL:0000542;4.48e-22;53!CL:0000898;1.52e-16;3!CL:0000815;8.27e-12;2!CL:0000792;8.27e-12;2!CL:0002677;8.27e-12;2!CL:0000236;6.52e-10;13!CL:0000623;9.18e-08;3!CL:0002087;6.46e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.88e-55,18;CL:0000789,4.88e-55,18;CL:0002420,4.88e-55,18;CL:0002419,4.88e-55,18;CL:0000790,4.88e-55,18;CL:0000838,7.32e-40,52;CL:0000542,5.06e-39,53;CL:0000051,5.06e-39,53;CL:0000084,8.51e-39,25;CL:0000827,8.51e-39,25;CL:0000624,1.20e-31,6;CL:0000625,7.45e-30,11;CL:0002087,4.75e-17,115;CL:0000898,1.11e-16,3;CL:0002031,1.70e-14,120;CL:0000738,1.05e-13,136;CL:0000815,8.51e-12,2;CL:0000792,8.51e-12,2;CL:0002677,8.51e-12,2;CL:0000037,3.25e-10,168;CL:0002032,1.09e-09,161;CL:0000837,1.09e-09,161;CL:0000988,1.83e-09,177;CL:0000236,4.91e-09,14;CL:0000623,1.13e-07,3;CL:0000825,1.13e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.28e-55;18!CL:0000051;4.48e-22;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.02e-13!15;UBERON:0000179!1.02e-13!15;UBERON:0000463!1.02e-13!15 | |ontology_enrichment_uberon=UBERON:0000178!1.02e-13!15;UBERON:0000179!1.02e-13!15;UBERON:0000463!1.02e-13!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.47e-08;15!UBERON:0000179;1.47e-08;15!UBERON:0000463;1.47e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.39e-08,15;UBERON:0000179,1.39e-08,15;UBERON:0000463,1.39e-08,15 | |||
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| ||
|short_description=p@chr14:105944261..105944276,+ | |short_description=p@chr14:105944261..105944276,+ | ||
}} | }} |
Latest revision as of 18:34, 24 July 2015
Short description: | p@chr14:105944261..105944276, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105944261..105944276, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.88e-55 | 18 |
alpha-beta T cell | 4.88e-55 | 18 |
immature T cell | 4.88e-55 | 18 |
mature T cell | 4.88e-55 | 18 |
immature alpha-beta T cell | 4.88e-55 | 18 |
lymphoid lineage restricted progenitor cell | 7.32e-40 | 52 |
lymphocyte | 5.06e-39 | 53 |
common lymphoid progenitor | 5.06e-39 | 53 |
T cell | 8.51e-39 | 25 |
pro-T cell | 8.51e-39 | 25 |
CD4-positive, alpha-beta T cell | 1.20e-31 | 6 |
CD8-positive, alpha-beta T cell | 7.45e-30 | 11 |
nongranular leukocyte | 4.75e-17 | 115 |
naive T cell | 1.11e-16 | 3 |
hematopoietic lineage restricted progenitor cell | 1.70e-14 | 120 |
leukocyte | 1.05e-13 | 136 |
regulatory T cell | 8.51e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.51e-12 | 2 |
naive regulatory T cell | 8.51e-12 | 2 |
hematopoietic stem cell | 3.25e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.09e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-09 | 161 |
hematopoietic cell | 1.83e-09 | 177 |
B cell | 4.91e-09 | 14 |
natural killer cell | 1.13e-07 | 3 |
pro-NK cell | 1.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.39e-08 | 15 |
haemolymphatic fluid | 1.39e-08 | 15 |
organism substance | 1.39e-08 | 15 |